RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CAMLGP49069 296 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 ATP6V1FQ16864 119 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 SPATA31B1PQ5VZV4 182 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 Q6ZRG5 221 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 TMEM252Q8N6L7 170 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 OR11H2Q8NH07 326 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 SHANK2-AS3Q9BTD1 123 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 SLC25A31Q9H0C2 315 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 ARV1Q9H2C2 271 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 C11orf1Q9H5F2 150 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 RPRMQ9NS64 109 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 UQCC1Q9NVA1 299 aa5.39□□□□□ -1.55
CPSF7-224ENST00000544990 H3BMM0 161 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 SOCS3O14543 225 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 PET100P0DJ07 73 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 HLA-DRB4P13762 266 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 BAXQ07812 192 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 FGL1Q08830 312 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 EBLN2Q6P2I7 272 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 FOXI2Q6ZQN5 318 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 OR1L4Q8NGR5 311 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 LRRC20Q8TCA0 184 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 ZNF503Q96F45 646 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 MGST2Q99735 147 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 SCRT1Q9BWW7 348 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 SAV1Q9H4B6 383 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-224ENST00000544990 HLA-DRB4X5D2U9 266 aa5.38□□□□□ -1.55
CPSF7-224ENST00000544990 HUWE1Q7Z6Z7 4374 aaKnown RBP5.38□□□□□ -1.55
CPSF7-224ENST00000544990 UBE2L5PA0A1B0GUS4 154 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 IGSF23A1L1A6 192 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 COX7A2P2O60397 106 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 MPDU1O75352 247 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 PTTG1O95997 202 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 RPL29P47914 159 aaKnown RBP5.37□□□□□ -1.55
CPSF7-224ENST00000544990 VWC2Q2TAL6 325 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 LRRC37A5PQ49AS3 106 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 C10orf113Q5VZT2 155 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 PATE2Q6UY27 113 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 Q6ZNX1 250 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 LINC00305Q7Z4B0 112 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 BPIFA4PQ86YQ2 179 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 OR4B1Q8NGF8 309 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 UHRF2Q96PU4 802 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 PFDN5Q99471 154 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 DNAJC4Q9NNZ3 241 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 WDR83OSQ9Y284 106 aa5.37□□□□□ -1.55
CPSF7-224ENST00000544990 CXorf65A6NEN9 183 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 NUPR2A6NF83 97 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 DUSP14O95147 198 aaKnown RBP5.36□□□□□ -1.55
CPSF7-224ENST00000544990 IGKV3-20P01619 116 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 GIG44P09565 113 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-224ENST00000544990 MIFP14174 115 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 C4BPBP20851 252 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 FGF7P21781 194 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 H2BFSP57053 126 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 B2MP61769 119 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 EWSR1Q01844 656 aaKnown RBP eCLIP5.36□□□□□ -1.55
CPSF7-224ENST00000544990 GDF5OSQ5U4N7 250 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 MIC13Q5XKP0 118 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 OR5C1Q8NGR4 320 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 PPP1R1CQ8WVI7 109 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 MFFQ9GZY8 342 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 C11orf68Q9H3H3 251 aaKnown RBP5.36□□□□□ -1.55
CPSF7-224ENST00000544990 CLEC5AQ9NY25 188 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 OR5AC2Q9NZP5 309 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 XCL2Q9UBD3 114 aa5.36□□□□□ -1.55
CPSF7-224ENST00000544990 A0A087X0K7 114 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 A0A0J9YX75 114 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 ZNF705EA8MWA4 302 aaPredicted RBP5.35□□□□□ -1.55
CPSF7-224ENST00000544990 H0YIZ8 118 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 JTBO76095 146 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 MPC2O95563 127 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 CXCL2P19875 107 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 PSG9Q00887 426 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 OPCMLQ14982 345 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 FAM78BQ5VT40 261 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 LCN15Q6UWW0 184 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 ZNF709Q8N972 641 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 CSNK1G2-AS1Q8NCQ2 148 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 ZNF738Q8NE65 137 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 C11orf45Q8TAV5 145 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 TMEM37Q8WXS4 190 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 SLC50A1Q9BRV3 221 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 MLST8Q9BVC4 326 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 KCNIP2Q9NS61 270 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 SLC39A9Q9NUM3 307 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 KLK5Q9Y337 293 aaPredicted RBP5.35□□□□□ -1.55
CPSF7-224ENST00000544990 ALG5Q9Y673 324 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 PXMP4Q9Y6I8 212 aa5.35□□□□□ -1.55
CPSF7-224ENST00000544990 KMT2CQ8NEZ4 4911 aaKnown RBP5.35□□□□□ -1.55
CPSF7-224ENST00000544990 TRAV8-2A0A0B4J237 113 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 SMIM9A6NGZ8 99 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 C17orf112F2Z3M2 114 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 F6UB75 175 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 MRPS12O15235 138 aaKnown RBP5.34□□□□□ -1.55
CPSF7-224ENST00000544990 DEFB4AO15263 64 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 AMBPP02760 352 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 CXCL3P19876 107 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms