RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 PRR20AP86496 221 aa16.81■□□□□ 0.28
CHFR-222ENST00000544093 BAXQ07812 192 aa16.81■□□□□ 0.28
CHFR-222ENST00000544093 LCN15Q6UWW0 184 aa16.81■□□□□ 0.28
CHFR-222ENST00000544093 TMEM37Q8WXS4 190 aa16.81■□□□□ 0.28
CHFR-222ENST00000544093 GOLT1BQ9Y3E0 138 aa16.81■□□□□ 0.28
CHFR-222ENST00000544093 UBE2L5PA0A1B0GUS4 154 aa16.8■□□□□ 0.28
CHFR-222ENST00000544093 TMEM189A5PLL7 270 aa16.8■□□□□ 0.28
CHFR-222ENST00000544093 ZNF738Q8NE65 137 aa16.8■□□□□ 0.28
CHFR-222ENST00000544093 SLC50A1Q9BRV3 221 aa16.8■□□□□ 0.28
CHFR-222ENST00000544093 SLC35B3Q9H1N7 401 aa16.8■□□□□ 0.28
CHFR-222ENST00000544093 MRPS12O15235 138 aaKnown RBP16.79■□□□□ 0.28
CHFR-222ENST00000544093 SIX6O95475 246 aa16.79■□□□□ 0.28
CHFR-222ENST00000544093 CXCL3P19876 107 aa16.79■□□□□ 0.28
CHFR-222ENST00000544093 C2CD4CQ8TF44 421 aa16.79■□□□□ 0.28
CHFR-222ENST00000544093 DNAH1Q9P2D7 4330 aa16.79■□□□□ 0.28
CHFR-222ENST00000544093 SSNA1O43805 119 aa16.78■□□□□ 0.28
CHFR-222ENST00000544093 PET100P0DJ07 73 aa16.78■□□□□ 0.28
CHFR-222ENST00000544093 CNN1P51911 297 aaKnown RBP16.78■□□□□ 0.28
CHFR-222ENST00000544093 FXYD7P58549 80 aa16.78■□□□□ 0.28
CHFR-222ENST00000544093 B2MP61769 119 aa16.78■□□□□ 0.28
CHFR-222ENST00000544093 PSG3Q16557 428 aa16.78■□□□□ 0.28
CHFR-222ENST00000544093 MIC13Q5XKP0 118 aa16.78■□□□□ 0.28
CHFR-222ENST00000544093 RNF182Q8N6D2 247 aa16.78■□□□□ 0.28
CHFR-222ENST00000544093 SLC39A9Q9NUM3 307 aa16.78■□□□□ 0.28
CHFR-222ENST00000544093 FGF7P21781 194 aa16.77■□□□□ 0.28
CHFR-222ENST00000544093 OPCMLQ14982 345 aa16.77■□□□□ 0.28
CHFR-222ENST00000544093 RFNGQ9Y644 331 aa16.77■□□□□ 0.28
CHFR-222ENST00000544093 PLECQ15149 4684 aaKnown RBP16.77■□□□□ 0.27
CHFR-222ENST00000544093 HLA-DMBP28068 263 aa16.76■□□□□ 0.27
CHFR-222ENST00000544093 GUK1Q16774 197 aa16.76■□□□□ 0.27
CHFR-222ENST00000544093 LRRC37A5PQ49AS3 106 aa16.76■□□□□ 0.27
CHFR-222ENST00000544093 IGFL4Q6B9Z1 124 aa16.76■□□□□ 0.27
CHFR-222ENST00000544093 AMTNQ6UX39 209 aa16.76■□□□□ 0.27
CHFR-222ENST00000544093 IGF2BP2-AS1Q96M15 143 aa16.76■□□□□ 0.27
CHFR-222ENST00000544093 ZNF331Q9NQX6 463 aaPredicted RBP16.76■□□□□ 0.27
CHFR-222ENST00000544093 ALMS1Q8TCU4 4167 aa16.76■□□□□ 0.27
CHFR-222ENST00000544093 IGHV3OR16-12A0A075B7B8 117 aa16.75■□□□□ 0.27
CHFR-222ENST00000544093 TRAV10A0A0B4J240 114 aa16.75■□□□□ 0.27
CHFR-222ENST00000544093 TEX48A0A1B0GUV7 120 aa16.75■□□□□ 0.27
CHFR-222ENST00000544093 LY6G6CO95867 125 aa16.75■□□□□ 0.27
CHFR-222ENST00000544093 H2BFSP57053 126 aa16.75■□□□□ 0.27
CHFR-222ENST00000544093 OR11H7Q8NGC8 314 aa16.75■□□□□ 0.27
CHFR-222ENST00000544093 OR5C1Q8NGR4 320 aa16.75■□□□□ 0.27
CHFR-222ENST00000544093 KCNIP2Q9NS61 270 aa16.75■□□□□ 0.27
CHFR-222ENST00000544093 PXMP4Q9Y6I8 212 aa16.75■□□□□ 0.27
CHFR-222ENST00000544093 HBE1P02100 147 aa16.74■□□□□ 0.27
CHFR-222ENST00000544093 IGLC2P0DOY2 106 aa16.74■□□□□ 0.27
CHFR-222ENST00000544093 NHLH2Q02577 135 aa16.74■□□□□ 0.27
CHFR-222ENST00000544093 OR8A1Q8NGG7 326 aa16.74■□□□□ 0.27
CHFR-222ENST00000544093 PPP1R1CQ8WVI7 109 aa16.74■□□□□ 0.27
CHFR-222ENST00000544093 NPCDR1Q9BY65 106 aa16.74■□□□□ 0.27
CHFR-222ENST00000544093 OR5AC2Q9NZP5 309 aa16.74■□□□□ 0.27
CHFR-222ENST00000544093 INSP01308 110 aa16.73■□□□□ 0.27
CHFR-222ENST00000544093 SPART-AS1P0CW21 52 aa16.73■□□□□ 0.27
CHFR-222ENST00000544093 RPUSD4Q96CM3 377 aaKnown RBP16.73■□□□□ 0.27
CHFR-222ENST00000544093 TMEM208Q9BTX3 173 aa16.73■□□□□ 0.27
CHFR-222ENST00000544093 PPP1R14DQ9NXH3 145 aa16.73■□□□□ 0.27
CHFR-222ENST00000544093 BOLA2-SMG1P6H3BVE0 249 aa16.72■□□□□ 0.27
CHFR-222ENST00000544093 HIST1H1AQ02539 215 aaPredicted RBP16.72■□□□□ 0.27
CHFR-222ENST00000544093 MORN5Q5VZ52 161 aa16.72■□□□□ 0.27
CHFR-222ENST00000544093 LGALS9CQ6DKI2 356 aa16.72■□□□□ 0.27
CHFR-222ENST00000544093 Q6ZTC4 211 aa16.72■□□□□ 0.27
CHFR-222ENST00000544093 C1orf158Q8N1D5 194 aa16.72■□□□□ 0.27
CHFR-222ENST00000544093 H0YIZ8 118 aa16.71■□□□□ 0.27
CHFR-222ENST00000544093 ZNF253O75346 499 aa16.71■□□□□ 0.27
CHFR-222ENST00000544093 PTTG1O95997 202 aa16.71■□□□□ 0.27
CHFR-222ENST00000544093 RHOBP62745 196 aa16.71■□□□□ 0.27
CHFR-222ENST00000544093 SPINK13Q1W4C9 94 aa16.71■□□□□ 0.27
CHFR-222ENST00000544093 RRN3P1Q2M238 152 aa16.71■□□□□ 0.27
CHFR-222ENST00000544093 MPC2O95563 127 aa16.7■□□□□ 0.26
CHFR-222ENST00000544093 C12orf74Q32Q52 190 aa16.7■□□□□ 0.26
CHFR-222ENST00000544093 TMEM14CQ9P0S9 112 aa16.7■□□□□ 0.26
CHFR-222ENST00000544093 CELA1Q9UNI1 258 aa16.7■□□□□ 0.26
CHFR-222ENST00000544093 M0R2Z0 102 aa16.69■□□□□ 0.26
CHFR-222ENST00000544093 CLINT1Q14677 625 aa16.69■□□□□ 0.26
CHFR-222ENST00000544093 TMEM256Q8N2U0 113 aa16.69■□□□□ 0.26
CHFR-222ENST00000544093 THAP6Q8TBB0 222 aa16.69■□□□□ 0.26
CHFR-222ENST00000544093 SAT2Q96F10 170 aaPredicted RBP16.69■□□□□ 0.26
CHFR-222ENST00000544093 LOC102723971A0A1B0GUV8 181 aa16.68■□□□□ 0.26
CHFR-222ENST00000544093 IGLL5B9A064 214 aa16.68■□□□□ 0.26
CHFR-222ENST00000544093 C17orf112F2Z3M2 114 aa16.68■□□□□ 0.26
CHFR-222ENST00000544093 H3BQ15 152 aa16.68■□□□□ 0.26
CHFR-222ENST00000544093 CRXO43186 299 aaPredicted RBP16.68■□□□□ 0.26
CHFR-222ENST00000544093 EMP1P54849 157 aa16.68■□□□□ 0.26
CHFR-222ENST00000544093 OR10J6PQ8NGY7 276 aa16.68■□□□□ 0.26
CHFR-222ENST00000544093 WDR61Q9GZS3 305 aaKnown RBP16.68■□□□□ 0.26
CHFR-222ENST00000544093 TRAV5A0A0B4J249 113 aa16.67■□□□□ 0.26
CHFR-222ENST00000544093 SLC17A3O00476 420 aa16.67■□□□□ 0.26
CHFR-222ENST00000544093 PDE6HQ13956 83 aa16.67■□□□□ 0.26
CHFR-222ENST00000544093 ATP5SQ99766 215 aa16.67■□□□□ 0.26
CHFR-222ENST00000544093 RNF126Q9BV68 326 aa16.67■□□□□ 0.26
CHFR-222ENST00000544093 DEFB131BA0A096LNP1 70 aa16.66■□□□□ 0.26
CHFR-222ENST00000544093 CDKN1BP46527 198 aa16.66■□□□□ 0.26
CHFR-222ENST00000544093 DKK2Q9UBU2 259 aa16.66■□□□□ 0.26
CHFR-222ENST00000544093 SNRPCP09234 159 aaKnown RBP16.65■□□□□ 0.26
CHFR-222ENST00000544093 HIST1H1EP10412 219 aaKnown RBP16.65■□□□□ 0.26
CHFR-222ENST00000544093 TSPOP30536 169 aa16.65■□□□□ 0.26
CHFR-222ENST00000544093 OXA1LQ15070 435 aa16.65■□□□□ 0.26
CHFR-222ENST00000544093 MRPL53Q96EL3 112 aaKnown RBP16.65■□□□□ 0.26
CHFR-222ENST00000544093 MRPL32Q9BYC8 188 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms