RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 LCN15Q6UWW0 184 aa15.86■□□□□ 0.13
OTUB1-212ENST00000543988 CSNK1G2-AS1Q8NCQ2 148 aa15.86■□□□□ 0.13
OTUB1-212ENST00000543988 ZNF738Q8NE65 137 aa15.86■□□□□ 0.13
OTUB1-212ENST00000543988 OR4B1Q8NGF8 309 aa15.86■□□□□ 0.13
OTUB1-212ENST00000543988 ASB13Q8WXK3 278 aa15.86■□□□□ 0.13
OTUB1-212ENST00000543988 XCL2Q9UBD3 114 aa15.86■□□□□ 0.13
OTUB1-212ENST00000543988 KMT2CQ8NEZ4 4911 aaKnown RBP15.85■□□□□ 0.13
OTUB1-212ENST00000543988 SLC17A3O00476 420 aa15.85■□□□□ 0.13
OTUB1-212ENST00000543988 CXCL2P19875 107 aa15.85■□□□□ 0.13
OTUB1-212ENST00000543988 NUTF2P61970 127 aaKnown RBP15.85■□□□□ 0.13
OTUB1-212ENST00000543988 LRRC20Q8TCA0 184 aa15.85■□□□□ 0.13
OTUB1-212ENST00000543988 CLUHP3Q96NS8 147 aa15.85■□□□□ 0.13
OTUB1-212ENST00000543988 IFNA5P01569 189 aa15.84■□□□□ 0.13
OTUB1-212ENST00000543988 FXYD7P58549 80 aa15.84■□□□□ 0.13
OTUB1-212ENST00000543988 HRH4Q9H3N8 390 aa15.84■□□□□ 0.13
OTUB1-212ENST00000543988 ZNF331Q9NQX6 463 aaPredicted RBP15.84■□□□□ 0.13
OTUB1-212ENST00000543988 STARD9Q9P2P6 4700 aa15.83■□□□□ 0.13
OTUB1-212ENST00000543988 C17orf112F2Z3M2 114 aa15.83■□□□□ 0.12
OTUB1-212ENST00000543988 PRB4P10163 310 aaPredicted RBP15.83■□□□□ 0.12
OTUB1-212ENST00000543988 PSG3Q16557 428 aa15.83■□□□□ 0.12
OTUB1-212ENST00000543988 SCGB1C1Q8TD33 95 aa15.83■□□□□ 0.12
OTUB1-212ENST00000543988 AQP10Q96PS8 301 aa15.83■□□□□ 0.12
OTUB1-212ENST00000543988 SLC50A1Q9BRV3 221 aa15.83■□□□□ 0.12
OTUB1-212ENST00000543988 C1QTNF4Q9BXJ3 329 aa15.83■□□□□ 0.12
OTUB1-212ENST00000543988 SLC35B3Q9H1N7 401 aa15.83■□□□□ 0.12
OTUB1-212ENST00000543988 A8MTW9 85 aa15.82■□□□□ 0.12
OTUB1-212ENST00000543988 ZNF705DP0CH99 300 aaPredicted RBP15.82■□□□□ 0.12
OTUB1-212ENST00000543988 ZNF705BP0CI00 300 aaPredicted RBP15.82■□□□□ 0.12
OTUB1-212ENST00000543988 CNN1P51911 297 aaKnown RBP15.82■□□□□ 0.12
OTUB1-212ENST00000543988 PSG9Q00887 426 aa15.82■□□□□ 0.12
OTUB1-212ENST00000543988 MIR17HGQ75NE6 70 aa15.82■□□□□ 0.12
OTUB1-212ENST00000543988 OR2T35Q8NGX2 323 aa15.82■□□□□ 0.12
OTUB1-212ENST00000543988 IL17DQ8TAD2 202 aa15.82■□□□□ 0.12
OTUB1-212ENST00000543988 PARD6GQ9BYG4 376 aaPredicted RBP15.82■□□□□ 0.12
OTUB1-212ENST00000543988 C11orf68Q9H3H3 251 aaKnown RBP15.82■□□□□ 0.12
OTUB1-212ENST00000543988 TMEM14CQ9P0S9 112 aa15.82■□□□□ 0.12
OTUB1-212ENST00000543988 X6R8D5 127 aa15.82■□□□□ 0.12
OTUB1-212ENST00000543988 ZNF705EA8MWA4 302 aaPredicted RBP15.81■□□□□ 0.12
OTUB1-212ENST00000543988 AMTNQ6UX39 209 aa15.81■□□□□ 0.12
OTUB1-212ENST00000543988 Q8NAQ8 132 aa15.81■□□□□ 0.12
OTUB1-212ENST00000543988 SAT2Q96F10 170 aaPredicted RBP15.81■□□□□ 0.12
OTUB1-212ENST00000543988 SLC25A2Q9BXI2 301 aa15.81■□□□□ 0.12
OTUB1-212ENST00000543988 ZNF586Q9NXT0 402 aa15.81■□□□□ 0.12
OTUB1-212ENST00000543988 RFNGQ9Y644 331 aa15.81■□□□□ 0.12
OTUB1-212ENST00000543988 FXYD6-FXYD2A0A087WZ82 144 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 G3V3Q6 166 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 DEFB4AO15263 64 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 PYYP10082 97 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 GUK1Q16774 197 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 FFAR4Q5NUL3 377 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 OR8A1Q8NGG7 326 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 RPUSD4Q96CM3 377 aaKnown RBP15.8■□□□□ 0.12
OTUB1-212ENST00000543988 FAM167A-AS1Q96KT0 104 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 MFFQ9GZY8 342 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 CSMD3Q7Z407 3707 aa15.8■□□□□ 0.12
OTUB1-212ENST00000543988 IGHV4-28A0A0C4DH34 117 aa15.79■□□□□ 0.12
OTUB1-212ENST00000543988 DUSP14O95147 198 aaKnown RBP15.79■□□□□ 0.12
OTUB1-212ENST00000543988 HIST1H1AQ02539 215 aaPredicted RBP15.79■□□□□ 0.12
OTUB1-212ENST00000543988 MRPL32Q9BYC8 188 aaKnown RBP15.79■□□□□ 0.12
OTUB1-212ENST00000543988 TRBV19A0A075B6N1 114 aa15.78■□□□□ 0.12
OTUB1-212ENST00000543988 RNF222A6NCQ9 220 aa15.78■□□□□ 0.12
OTUB1-212ENST00000543988 FUT9Q9Y231 359 aa15.78■□□□□ 0.12
OTUB1-212ENST00000543988 DYNC2H1Q8NCM8 4307 aaKnown RBP15.77■□□□□ 0.12
OTUB1-212ENST00000543988 ZNF705FA8MVS1 300 aaPredicted RBP15.77■□□□□ 0.12
OTUB1-212ENST00000543988 HIST1H1EP10412 219 aaKnown RBP15.77■□□□□ 0.12
OTUB1-212ENST00000543988 MIFP14174 115 aa15.77■□□□□ 0.12
OTUB1-212ENST00000543988 PMS2P11Q13670 270 aa15.77■□□□□ 0.12
OTUB1-212ENST00000543988 TNFSF18Q9UNG2 199 aa15.77■□□□□ 0.12
OTUB1-212ENST00000543988 PRAC2D3DTV9 90 aa15.76■□□□□ 0.11
OTUB1-212ENST00000543988 ZNF253O75346 499 aa15.76■□□□□ 0.11
OTUB1-212ENST00000543988 NDUFB4O95168 129 aa15.76■□□□□ 0.11
OTUB1-212ENST00000543988 RBMY1A1P0DJD3 496 aaKnown RBP15.76■□□□□ 0.11
OTUB1-212ENST00000543988 RBMY1CP0DJD4 496 aa15.76■□□□□ 0.11
OTUB1-212ENST00000543988 ZNF266Q14584 549 aa15.76■□□□□ 0.11
OTUB1-212ENST00000543988 RBMY1FQ15415 496 aaKnown RBP15.76■□□□□ 0.11
OTUB1-212ENST00000543988 ZNF705AQ6ZN79 300 aaPredicted RBP15.76■□□□□ 0.11
OTUB1-212ENST00000543988 INO80EQ8NBZ0 244 aaPredicted RBP15.76■□□□□ 0.11
OTUB1-212ENST00000543988 CXorf65A6NEN9 183 aa15.75■□□□□ 0.11
OTUB1-212ENST00000543988 M0R2Z0 102 aa15.75■□□□□ 0.11
OTUB1-212ENST00000543988 SPINK13Q1W4C9 94 aa15.75■□□□□ 0.11
OTUB1-212ENST00000543988 BLNKQ8WV28 456 aa15.75■□□□□ 0.11
OTUB1-212ENST00000543988 TIMM9Q9Y5J7 89 aa15.75■□□□□ 0.11
OTUB1-212ENST00000543988 IGHV3OR16-12A0A075B7B8 117 aa15.74■□□□□ 0.11
OTUB1-212ENST00000543988 BOLA2-SMG1P6H3BVE0 249 aa15.74■□□□□ 0.11
OTUB1-212ENST00000543988 PDE6HQ13956 83 aa15.74■□□□□ 0.11
OTUB1-212ENST00000543988 HSD17B11Q8NBQ5 300 aa15.74■□□□□ 0.11
OTUB1-212ENST00000543988 FXYD5Q96DB9 178 aa15.74■□□□□ 0.11
OTUB1-212ENST00000543988 OR51M1Q9H341 326 aa15.74■□□□□ 0.11
OTUB1-212ENST00000543988 SMLR1H3BR10 107 aa15.73■□□□□ 0.11
OTUB1-212ENST00000543988 EIF3GO75821 320 aaKnown RBP eCLIP15.73■□□□□ 0.11
OTUB1-212ENST00000543988 OR10J4P0C629 311 aa15.73■□□□□ 0.11
OTUB1-212ENST00000543988 RAB2AP61019 212 aa15.73■□□□□ 0.11
OTUB1-212ENST00000543988 RHOBP62745 196 aa15.73■□□□□ 0.11
OTUB1-212ENST00000543988 C1orf158Q8N1D5 194 aa15.73■□□□□ 0.11
OTUB1-212ENST00000543988 IGF2BP2-AS1Q96M15 143 aa15.73■□□□□ 0.11
OTUB1-212ENST00000543988 PAXXQ9BUH6 204 aa15.73■□□□□ 0.11
OTUB1-212ENST00000543988 TENM2Q9NT68 2774 aa15.73■□□□□ 0.11
OTUB1-212ENST00000543988 M0R3E3 92 aa15.72■□□□□ 0.11
OTUB1-212ENST00000543988 CRXO43186 299 aaPredicted RBP15.72■□□□□ 0.11
OTUB1-212ENST00000543988 OR7C2O60412 319 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms