RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, human

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPPL3-208	ENST00000543854	TMEM37	Q8WXS4	190 aa		13.81	□□□□□ -0.2
SPPL3-208	ENST00000543854	LINC00476	Q8WZB0	136 aa		13.81	□□□□□ -0.2
SPPL3-208	ENST00000543854	PFDN5	Q99471	154 aa		13.81	□□□□□ -0.2
SPPL3-208	ENST00000543854	SLC25A31	Q9H0C2	315 aa		13.81	□□□□□ -0.2
SPPL3-208	ENST00000543854	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	MRPS12	O15235	138 aa	Known RBP	13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	DUSP14	O95147	198 aa	Known RBP	13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	ZNF705D	P0CH99	300 aa	Predicted RBP	13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	ZNF705B	P0CI00	300 aa	Predicted RBP	13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	CNN1	P51911	297 aa	Known RBP	13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	H2BFS	P57053	126 aa		13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	B2M	P61769	119 aa		13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	OPCML	Q14982	345 aa		13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	LCN15	Q6UWW0	184 aa		13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	OR5AC2	Q9NZP5	309 aa		13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	GOLT1B	Q9Y3E0	138 aa		13.8	□□□□□ -0.2
SPPL3-208	ENST00000543854	IGHV3OR16-12	A0A075B7B8	117 aa		13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854		A8MTW9	85 aa		13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854	MPDU1	O75352	247 aa		13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854	CXCL3	P19876	107 aa		13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854	RPL29	P47914	159 aa	Known RBP	13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854	OR5C1	Q8NGR4	320 aa		13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854	NEU1	Q99519	415 aa		13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854	SLC50A1	Q9BRV3	221 aa		13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854	DNAJC4	Q9NNZ3	241 aa		13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854	SLC39A9	Q9NUM3	307 aa		13.79	□□□□□ -0.2
SPPL3-208	ENST00000543854	SMIM9	A6NGZ8	99 aa		13.78	□□□□□ -0.2
SPPL3-208	ENST00000543854	PET100	P0DJ07	73 aa		13.78	□□□□□ -0.2
SPPL3-208	ENST00000543854	HLA-DMB	P28068	263 aa		13.78	□□□□□ -0.2
SPPL3-208	ENST00000543854	MORN5	Q5VZ52	161 aa		13.78	□□□□□ -0.2
SPPL3-208	ENST00000543854	AMTN	Q6UX39	209 aa		13.78	□□□□□ -0.2
SPPL3-208	ENST00000543854	CHAC2	Q8WUX2	184 aa		13.78	□□□□□ -0.2
SPPL3-208	ENST00000543854	PPP1R1C	Q8WVI7	109 aa		13.78	□□□□□ -0.2
SPPL3-208	ENST00000543854	PXMP4	Q9Y6I8	212 aa		13.78	□□□□□ -0.2
SPPL3-208	ENST00000543854	C11orf94	C9JXX5	98 aa		13.77	□□□□□ -0.21
SPPL3-208	ENST00000543854	LY6G6C	O95867	125 aa		13.77	□□□□□ -0.21
SPPL3-208	ENST00000543854	AMBP	P02760	352 aa		13.77	□□□□□ -0.21
SPPL3-208	ENST00000543854	HIST1H1A	Q02539	215 aa	Predicted RBP	13.77	□□□□□ -0.21
SPPL3-208	ENST00000543854	NHLH2	Q02577	135 aa		13.77	□□□□□ -0.21
SPPL3-208	ENST00000543854	OR11H7	Q8NGC8	314 aa		13.77	□□□□□ -0.21
SPPL3-208	ENST00000543854	C2CD4C	Q8TF44	421 aa		13.77	□□□□□ -0.21
SPPL3-208	ENST00000543854	NPCDR1	Q9BY65	106 aa		13.77	□□□□□ -0.21
SPPL3-208	ENST00000543854	RFNG	Q9Y644	331 aa		13.77	□□□□□ -0.21
SPPL3-208	ENST00000543854	TMEM189	A5PLL7	270 aa		13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854		H0YIZ8	118 aa		13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854	IGLC2	P0DOY2	106 aa		13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854	CLINT1	Q14677	625 aa		13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854	PSG3	Q16557	428 aa		13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854	OR8A1	Q8NGG7	326 aa		13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854	THAP6	Q8TBB0	222 aa		13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854	IGF2BP2-AS1	Q96M15	143 aa		13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854	CELA1	Q9UNI1	258 aa		13.76	□□□□□ -0.21
SPPL3-208	ENST00000543854	BOLA2-SMG1P6	H3BVE0	249 aa		13.75	□□□□□ -0.21
SPPL3-208	ENST00000543854	INS	P01308	110 aa		13.75	□□□□□ -0.21
SPPL3-208	ENST00000543854	SNRPC	P09234	159 aa	Known RBP	13.75	□□□□□ -0.21
SPPL3-208	ENST00000543854	SPINK13	Q1W4C9	94 aa		13.75	□□□□□ -0.21
SPPL3-208	ENST00000543854		Q6ZTC4	211 aa		13.75	□□□□□ -0.21
SPPL3-208	ENST00000543854	RPUSD4	Q96CM3	377 aa	Known RBP	13.75	□□□□□ -0.21
SPPL3-208	ENST00000543854	TMEM208	Q9BTX3	173 aa		13.75	□□□□□ -0.21
SPPL3-208	ENST00000543854	KCNIP2	Q9NS61	270 aa		13.75	□□□□□ -0.21
SPPL3-208	ENST00000543854		M0R2Z0	102 aa		13.74	□□□□□ -0.21
SPPL3-208	ENST00000543854	SLC17A3	O00476	420 aa		13.74	□□□□□ -0.21
SPPL3-208	ENST00000543854	MPC2	O95563	127 aa		13.74	□□□□□ -0.21
SPPL3-208	ENST00000543854	PTTG1	O95997	202 aa		13.74	□□□□□ -0.21
SPPL3-208	ENST00000543854	HBE1	P02100	147 aa		13.74	□□□□□ -0.21
SPPL3-208	ENST00000543854	EMP1	P54849	157 aa		13.74	□□□□□ -0.21
SPPL3-208	ENST00000543854	GUK1	Q16774	197 aa		13.74	□□□□□ -0.21
SPPL3-208	ENST00000543854	C1orf158	Q8N1D5	194 aa		13.74	□□□□□ -0.21
SPPL3-208	ENST00000543854	PPP1R14D	Q9NXH3	145 aa		13.74	□□□□□ -0.21
SPPL3-208	ENST00000543854	TRAV10	A0A0B4J240	114 aa		13.73	□□□□□ -0.21
SPPL3-208	ENST00000543854	TRAV5	A0A0B4J249	113 aa		13.73	□□□□□ -0.21
SPPL3-208	ENST00000543854		H3BTX0	84 aa		13.73	□□□□□ -0.21
SPPL3-208	ENST00000543854	RHOB	P62745	196 aa		13.73	□□□□□ -0.21
SPPL3-208	ENST00000543854	TEX48	A0A1B0GUV7	120 aa		13.72	□□□□□ -0.21
SPPL3-208	ENST00000543854		H3BQ15	152 aa		13.72	□□□□□ -0.21
SPPL3-208	ENST00000543854	TCTA	P57738	103 aa		13.72	□□□□□ -0.21
SPPL3-208	ENST00000543854	RRN3P1	Q2M238	152 aa		13.72	□□□□□ -0.21
SPPL3-208	ENST00000543854	BAP18	Q8IXM2	172 aa		13.72	□□□□□ -0.21
SPPL3-208	ENST00000543854	ATP5S	Q99766	215 aa		13.72	□□□□□ -0.21
SPPL3-208	ENST00000543854	WDR61	Q9GZS3	305 aa	Known RBP	13.72	□□□□□ -0.21
SPPL3-208	ENST00000543854	ALG5	Q9Y673	324 aa		13.72	□□□□□ -0.21
SPPL3-208	ENST00000543854	LOC102723971	A0A1B0GUV8	181 aa		13.71	□□□□□ -0.21
SPPL3-208	ENST00000543854	IGLL5	B9A064	214 aa		13.71	□□□□□ -0.21
SPPL3-208	ENST00000543854	SPART-AS1	P0CW21	52 aa		13.71	□□□□□ -0.21
SPPL3-208	ENST00000543854	C12orf74	Q32Q52	190 aa		13.71	□□□□□ -0.21
SPPL3-208	ENST00000543854	ZNF767P	Q75MW2	155 aa		13.71	□□□□□ -0.21
SPPL3-208	ENST00000543854	RNF126	Q9BV68	326 aa		13.71	□□□□□ -0.21
SPPL3-208	ENST00000543854	MBD2	Q9UBB5	411 aa		13.71	□□□□□ -0.21
SPPL3-208	ENST00000543854	CRX	O43186	299 aa	Predicted RBP	13.7	□□□□□ -0.22
SPPL3-208	ENST00000543854	PRB4	P10163	310 aa	Predicted RBP	13.7	□□□□□ -0.22
SPPL3-208	ENST00000543854	GCSAML	Q5JQS6	135 aa		13.7	□□□□□ -0.22
SPPL3-208	ENST00000543854	OR10J6P	Q8NGY7	276 aa		13.7	□□□□□ -0.22
SPPL3-208	ENST00000543854	SAT2	Q96F10	170 aa	Predicted RBP	13.7	□□□□□ -0.22
SPPL3-208	ENST00000543854	TMEM14C	Q9P0S9	112 aa		13.7	□□□□□ -0.22
SPPL3-208	ENST00000543854	HSPB11	Q9Y547	144 aa		13.7	□□□□□ -0.22
SPPL3-208	ENST00000543854	TRAV12-2	A0A075B6T6	113 aa		13.69	□□□□□ -0.22
SPPL3-208	ENST00000543854	C17orf112	F2Z3M2	114 aa		13.69	□□□□□ -0.22
SPPL3-208	ENST00000543854	ZNF253	O75346	499 aa		13.69	□□□□□ -0.22
SPPL3-208	ENST00000543854	ZNF586	Q9NXT0	402 aa		13.69	□□□□□ -0.22

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