RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 TRAV8-2A0A0B4J237 113 aa13.1□□□□□ -0.31
TSFM-208ENST00000543727 A0A0J9YX75 114 aa13.1□□□□□ -0.31
TSFM-208ENST00000543727 RNF222A6NCQ9 220 aa13.1□□□□□ -0.31
TSFM-208ENST00000543727 A8MTW9 85 aa13.1□□□□□ -0.31
TSFM-208ENST00000543727 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
TSFM-208ENST00000543727 PSMG3Q9BT73 122 aaPredicted RBP13.1□□□□□ -0.31
TSFM-208ENST00000543727 G3V3Q6 166 aa13.09□□□□□ -0.31
TSFM-208ENST00000543727 TAAR5O14804 337 aa13.09□□□□□ -0.31
TSFM-208ENST00000543727 DUSP14O95147 198 aaKnown RBP13.09□□□□□ -0.31
TSFM-208ENST00000543727 HIST1H1EP10412 219 aaKnown RBP13.09□□□□□ -0.31
TSFM-208ENST00000543727 RHOBP62745 196 aa13.09□□□□□ -0.31
TSFM-208ENST00000543727 PSG3Q16557 428 aa13.09□□□□□ -0.31
TSFM-208ENST00000543727 C20orf173Q96LM9 149 aa13.09□□□□□ -0.31
TSFM-208ENST00000543727 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
TSFM-208ENST00000543727 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.32
TSFM-208ENST00000543727 M6PRP20645 277 aa13.08□□□□□ -0.32
TSFM-208ENST00000543727 TAS2R45P59539 299 aa13.08□□□□□ -0.32
TSFM-208ENST00000543727 ACOT6Q3I5F7 207 aaPredicted RBP13.08□□□□□ -0.32
TSFM-208ENST00000543727 GCSAMLQ5JQS6 135 aa13.08□□□□□ -0.32
TSFM-208ENST00000543727 GDF5OSQ5U4N7 250 aa13.08□□□□□ -0.32
TSFM-208ENST00000543727 ZNF738Q8NE65 137 aa13.08□□□□□ -0.32
TSFM-208ENST00000543727 OR2G3Q8NGZ4 309 aa13.08□□□□□ -0.32
TSFM-208ENST00000543727 IL17DQ8TAD2 202 aa13.08□□□□□ -0.32
TSFM-208ENST00000543727 SAT2Q96F10 170 aaPredicted RBP13.08□□□□□ -0.32
TSFM-208ENST00000543727 TRAV5A0A0B4J249 113 aa13.07□□□□□ -0.32
TSFM-208ENST00000543727 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
TSFM-208ENST00000543727 C4BPBP20851 252 aa13.07□□□□□ -0.32
TSFM-208ENST00000543727 SERF2P84101 59 aa13.07□□□□□ -0.32
TSFM-208ENST00000543727 PSG9Q00887 426 aa13.07□□□□□ -0.32
TSFM-208ENST00000543727 ZNF345Q14585 488 aa13.07□□□□□ -0.32
TSFM-208ENST00000543727 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
TSFM-208ENST00000543727 GNPNAT1Q96EK6 184 aaPredicted RBP13.07□□□□□ -0.32
TSFM-208ENST00000543727 MRPL53Q96EL3 112 aaKnown RBP13.07□□□□□ -0.32
TSFM-208ENST00000543727 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
TSFM-208ENST00000543727 TRBV19A0A075B6N1 114 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 HMSDA8MTL9 139 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 C3orf84H3BNL1 204 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 H3BQ15 152 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 MBP02144 154 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 AMBPP02760 352 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 RNF182Q8N6D2 247 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 OR4B1Q8NGF8 309 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 MUC7Q8TAX7 377 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 FAM167A-AS1Q96KT0 104 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 RARRES2Q99969 163 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 OR51M1Q9H341 326 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 PRELID1Q9Y255 219 aa13.06□□□□□ -0.32
TSFM-208ENST00000543727 ARPC5O15511 151 aa13.05□□□□□ -0.32
TSFM-208ENST00000543727 JTBO76095 146 aa13.05□□□□□ -0.32
TSFM-208ENST00000543727 Q6ZNX1 250 aa13.05□□□□□ -0.32
TSFM-208ENST00000543727 MIR17HGQ75NE6 70 aa13.05□□□□□ -0.32
TSFM-208ENST00000543727 OR8A1Q8NGG7 326 aa13.05□□□□□ -0.32
TSFM-208ENST00000543727 OR11H2Q8NH07 326 aa13.05□□□□□ -0.32
TSFM-208ENST00000543727 MFFQ9GZY8 342 aa13.05□□□□□ -0.32
TSFM-208ENST00000543727 ZNF586Q9NXT0 402 aa13.05□□□□□ -0.32
TSFM-208ENST00000543727 HUWE1Q7Z6Z7 4374 aaKnown RBP13.04□□□□□ -0.32
TSFM-208ENST00000543727 ZNF705EA8MWA4 302 aaPredicted RBP13.04□□□□□ -0.32
TSFM-208ENST00000543727 F6UB75 175 aa13.04□□□□□ -0.32
TSFM-208ENST00000543727 SLC17A3O00476 420 aa13.04□□□□□ -0.32
TSFM-208ENST00000543727 HSD17B11Q8NBQ5 300 aa13.04□□□□□ -0.32
TSFM-208ENST00000543727 CSNK1G2-AS1Q8NCQ2 148 aa13.04□□□□□ -0.32
TSFM-208ENST00000543727 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
TSFM-208ENST00000543727 PAXXQ9BUH6 204 aa13.04□□□□□ -0.32
TSFM-208ENST00000543727 C11orf68Q9H3H3 251 aaKnown RBP13.04□□□□□ -0.32
TSFM-208ENST00000543727 AAMDCQ9H7C9 122 aa13.04□□□□□ -0.32
TSFM-208ENST00000543727 A0A1W2PPV4 95 aa13.03□□□□□ -0.32
TSFM-208ENST00000543727 OR7C2O60412 319 aa13.03□□□□□ -0.32
TSFM-208ENST00000543727 NBEAP1P0C6P0 100 aa13.03□□□□□ -0.32
TSFM-208ENST00000543727 PYYP10082 97 aa13.03□□□□□ -0.32
TSFM-208ENST00000543727 MIFP14174 115 aa13.03□□□□□ -0.32
TSFM-208ENST00000543727 ATP6V0CP27449 155 aa13.03□□□□□ -0.32
TSFM-208ENST00000543727 CNN1P51911 297 aaKnown RBP13.03□□□□□ -0.32
TSFM-208ENST00000543727 IGFL4Q6B9Z1 124 aa13.03□□□□□ -0.32
TSFM-208ENST00000543727 PQLC2Q6ZP29 291 aa13.03□□□□□ -0.32
TSFM-208ENST00000543727 DEFB1P60022 68 aa13.02□□□□□ -0.33
TSFM-208ENST00000543727 RPL7L1Q6DKI1 246 aaKnown RBP13.02□□□□□ -0.33
TSFM-208ENST00000543727 AMTNQ6UX39 209 aa13.02□□□□□ -0.33
TSFM-208ENST00000543727 LYPD1Q8N2G4 141 aa13.02□□□□□ -0.33
TSFM-208ENST00000543727 OR10J6PQ8NGY7 276 aa13.02□□□□□ -0.33
TSFM-208ENST00000543727 RNF141Q8WVD5 230 aa13.02□□□□□ -0.33
TSFM-208ENST00000543727 XCL2Q9UBD3 114 aa13.02□□□□□ -0.33
TSFM-208ENST00000543727 A0A0D9SG52 128 aa13.01□□□□□ -0.33
TSFM-208ENST00000543727 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
TSFM-208ENST00000543727 HIST1H1AQ02539 215 aaPredicted RBP13.01□□□□□ -0.33
TSFM-208ENST00000543727 KCNRGQ8N5I3 272 aa13.01□□□□□ -0.33
TSFM-208ENST00000543727 OR10G4Q8NGN3 311 aa13.01□□□□□ -0.33
TSFM-208ENST00000543727 OR10G9Q8NGN4 311 aa13.01□□□□□ -0.33
TSFM-208ENST00000543727 OR10G7Q8NGN6 311 aa13.01□□□□□ -0.33
TSFM-208ENST00000543727 FXYD5Q96DB9 178 aa13.01□□□□□ -0.33
TSFM-208ENST00000543727 NEU1Q99519 415 aa13.01□□□□□ -0.33
TSFM-208ENST00000543727 A0A0J9YWU9 116 aa13□□□□□ -0.33
TSFM-208ENST00000543727 SMIM9A6NGZ8 99 aa13□□□□□ -0.33
TSFM-208ENST00000543727 NDUFB4O95168 129 aa13□□□□□ -0.33
TSFM-208ENST00000543727 HLA-DMBP28068 263 aa13□□□□□ -0.33
TSFM-208ENST00000543727 UBE2L3P68036 154 aaKnown RBP13□□□□□ -0.33
TSFM-208ENST00000543727 ZNF705AQ6ZN79 300 aaPredicted RBP13□□□□□ -0.33
TSFM-208ENST00000543727 TCTE3Q8IZS6 198 aa13□□□□□ -0.33
TSFM-208ENST00000543727 ODF3Q96PU9 254 aa13□□□□□ -0.33
TSFM-208ENST00000543727 ARPC5LQ9BPX5 153 aa13□□□□□ -0.33
TSFM-208ENST00000543727 SMLR1H3BR10 107 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms