RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 IGFL4Q6B9Z1 124 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 LCN15Q6UWW0 184 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 OR8A1Q8NGG7 326 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 ARV1Q9H2C2 271 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 CRXO43186 299 aaPredicted RBP9.31□□□□□ -0.92
RTN3-213ENST00000543552 COX7A2P2O60397 106 aa9.31□□□□□ -0.92
RTN3-213ENST00000543552 BTCP35070 178 aa9.31□□□□□ -0.92
RTN3-213ENST00000543552 FAM3BP58499 235 aaPredicted RBP9.31□□□□□ -0.92
RTN3-213ENST00000543552 SLC38A11Q08AI6 406 aa9.31□□□□□ -0.92
RTN3-213ENST00000543552 TMEM88Q6PEY1 159 aa9.31□□□□□ -0.92
RTN3-213ENST00000543552 BPIFA4PQ86YQ2 179 aa9.31□□□□□ -0.92
RTN3-213ENST00000543552 BAP18Q8IXM2 172 aa9.31□□□□□ -0.92
RTN3-213ENST00000543552 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
RTN3-213ENST00000543552 C20orf85Q9H1P6 137 aa9.31□□□□□ -0.92
RTN3-213ENST00000543552 RCL1Q9Y2P8 373 aaKnown RBP9.31□□□□□ -0.92
RTN3-213ENST00000543552 PRSS29PA6NIE9 313 aa9.3□□□□□ -0.92
RTN3-213ENST00000543552 ZNF705GA8MUZ8 300 aaPredicted RBP9.3□□□□□ -0.92
RTN3-213ENST00000543552 M0R2N4 97 aa9.3□□□□□ -0.92
RTN3-213ENST00000543552 AGPAT2O15120 278 aa9.3□□□□□ -0.92
RTN3-213ENST00000543552 CCNKO75909 580 aa9.3□□□□□ -0.92
RTN3-213ENST00000543552 MBPP02686 304 aaPredicted RBP9.3□□□□□ -0.92
RTN3-213ENST00000543552 TAS2R60P59551 318 aa9.3□□□□□ -0.92
RTN3-213ENST00000543552 LINC00305Q7Z4B0 112 aa9.3□□□□□ -0.92
RTN3-213ENST00000543552 RPUSD4Q96CM3 377 aaKnown RBP9.3□□□□□ -0.92
RTN3-213ENST00000543552 C16orf74Q96GX8 76 aa9.3□□□□□ -0.92
RTN3-213ENST00000543552 LINC01587Q99440 93 aa9.3□□□□□ -0.92
RTN3-213ENST00000543552 ATG101Q9BSB4 218 aa9.3□□□□□ -0.92
RTN3-213ENST00000543552 TRAV12-2A0A075B6T6 113 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 C7orf66A4D0T2 115 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 DEFB130BP0DP73 79 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 DEFB130AP0DP74 79 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 PVALBP20472 110 aaPredicted RBP9.29□□□□□ -0.92
RTN3-213ENST00000543552 CDKN1BP46527 198 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 SDHCQ99643 169 aaPredicted RBP9.29□□□□□ -0.92
RTN3-213ENST00000543552 C20orf144Q9BQM9 153 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 PLA2G2EQ9NZK7 142 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 PXMP4Q9Y6I8 212 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 DNAH17Q9UFH2 4485 aa9.29□□□□□ -0.92
RTN3-213ENST00000543552 IGLV2-18A0A075B6J9 118 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 FAM25EA8MYX2 175 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 LYRM1O43325 122 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 ATP5G1P05496 136 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 ATP5G3P48201 142 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 BCAP31P51572 246 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 CAV2P51636 162 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 GUK1Q16774 197 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 C10orf113Q5VZT2 155 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 PATE2Q6UY27 113 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 ZNF493Q6ZR52 646 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 Q6ZRG5 221 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 ZNF331Q9NQX6 463 aaPredicted RBP9.28□□□□□ -0.92
RTN3-213ENST00000543552 NDUFA13Q9P0J0 144 aa9.28□□□□□ -0.92
RTN3-213ENST00000543552 TIMM8BQ9Y5J9 83 aaPredicted RBP9.28□□□□□ -0.92
RTN3-213ENST00000543552 KIAA1109Q2LD37 5005 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 C5orf51A6NDU8 294 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 H7BYZ3 331 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 MRPS12O15235 138 aaKnown RBP9.27□□□□□ -0.93
RTN3-213ENST00000543552 RTL8CO15255 209 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 CAMLGP49069 296 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 Q6ZR54 194 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 OR1L4Q8NGR5 311 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 ZNF431Q8TF32 576 aaPredicted RBP9.27□□□□□ -0.93
RTN3-213ENST00000543552 TMEM263Q8WUH6 116 aaKnown RBP9.27□□□□□ -0.93
RTN3-213ENST00000543552 PFDN5Q99471 154 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 MGST2Q99735 147 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 NUDT15Q9NV35 164 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 UQCC1Q9NVA1 299 aa9.27□□□□□ -0.93
RTN3-213ENST00000543552 LSM5Q9Y4Y9 91 aaKnown RBP9.27□□□□□ -0.93
RTN3-213ENST00000543552 A0A1B0GVY2 172 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 CBY3A6NI87 242 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 F5H768 121 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 CCSO14618 274 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 TCRBP04435 133 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 HTN1P15515 57 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 HBG1P69891 147 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 HBG2P69892 147 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 ARL16Q0P5N6 197 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 STX12Q86Y82 276 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 CCDC28AQ8IWP9 274 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 DNAJC4Q9NNZ3 241 aa9.26□□□□□ -0.93
RTN3-213ENST00000543552 TRAV6A0A075B6T7 132 aa9.25□□□□□ -0.93
RTN3-213ENST00000543552 MED14OSP0DP75 135 aa9.25□□□□□ -0.93
RTN3-213ENST00000543552 AZU1P20160 251 aa9.25□□□□□ -0.93
RTN3-213ENST00000543552 OPCMLQ14982 345 aa9.25□□□□□ -0.93
RTN3-213ENST00000543552 C1orf134Q5TEV5 83 aa9.25□□□□□ -0.93
RTN3-213ENST00000543552 NRARPQ7Z6K4 114 aa9.25□□□□□ -0.93
RTN3-213ENST00000543552 C12orf45Q8N5I9 185 aaPredicted RBP9.25□□□□□ -0.93
RTN3-213ENST00000543552 TMEM37Q8WXS4 190 aa9.25□□□□□ -0.93
RTN3-213ENST00000543552 C2orf50Q96LR7 162 aa9.25□□□□□ -0.93
RTN3-213ENST00000543552 CCDC32Q9BV29 185 aa9.25□□□□□ -0.93
RTN3-213ENST00000543552 PLAC8L1A1L4L8 177 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 PLA2G10O15496 165 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 CST7O76096 145 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 NUDT3O95989 172 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 PRM2P04554 102 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 IGLC2P0DOY2 106 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 S100A11P31949 105 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 LEPP41159 167 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 CCL18P55774 89 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms