RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 PCNPQ8WW12 178 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-IT3-201ENST00000542680 GLMPQ8WWB7 406 aa9.34□□□□□ -0.91
CACNA1C-IT3-201ENST00000542680 FXYD5Q96DB9 178 aa9.34□□□□□ -0.91
CACNA1C-IT3-201ENST00000542680 ZNF503Q96F45 646 aa9.34□□□□□ -0.91
CACNA1C-IT3-201ENST00000542680 FAM210AQ96ND0 272 aa9.34□□□□□ -0.91
CACNA1C-IT3-201ENST00000542680 NKX6-2Q9C056 277 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-IT3-201ENST00000542680 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
CACNA1C-IT3-201ENST00000542680 IGHV3OR16-8A0A075B7F1 116 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TRAV5A0A0B4J249 113 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 A0A1W2PRE2 83 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 OVOL1O14753 267 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 CHEK1O14757 476 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 BCL2P10415 239 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 NSUN5P1Q3KNT7 163 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 LEMD1Q68G75 181 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 UQCC3Q6UW78 93 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 SIGLEC15Q6ZMC9 328 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 LYPD1Q8N2G4 141 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 DLX4Q92988 240 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TCEAL7Q9BRU2 100 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 RHPN1-AS1Q9BWJ2 59 aa9.33□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 ZNF207O43670 478 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 PF4P02776 101 aa9.32□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 NBEAP1P0C6P0 100 aa9.32□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 PYYP10082 97 aa9.32□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 ATF4P18848 351 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 CBLN1P23435 193 aa9.32□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 IQCF2Q8IXL9 164 aa9.32□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 CLEC5AQ9NY25 188 aa9.32□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 GNG13Q9P2W3 67 aa9.32□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TRBV19A0A075B6N1 114 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 LOC102723971A0A1B0GUV8 181 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 A0A1B0GV50 99 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 RBFOX3A6NFN3 312 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 APOHP02749 345 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 OR10J4P0C629 311 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 FOLR2P14207 255 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 CCL20P78556 96 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 PSG9Q00887 426 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 ZNF506Q5JVG8 444 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 DUX3Q96PT4 197 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TMPRSS5Q9H3S3 457 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 VAX2Q9UIW0 290 aa9.31□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 FAM74A7A6NL05 159 aa9.3□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 EIF3GO75821 320 aaKnown RBP eCLIP9.3□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 CSN3P07498 182 aa9.3□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 MEF2BQ02080 365 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 PEA15Q15121 130 aa9.3□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 COMMD7Q86VX2 200 aa9.3□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 LINC00482Q8N8I6 264 aa9.3□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 ZNF586Q9NXT0 402 aa9.3□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 DNAH7Q8WXX0 4024 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TRAV2A0A0B4J234 112 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TRAV25A0A0B4J276 109 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 ZNF785A8K8V0 405 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 H3BQ15 152 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 PDE6DO43924 150 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TOR2AQ5JU69 321 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 FAM90A2PQ658T7 463 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 OR2K2Q8NGT1 345 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 EIF5A2Q9GZV4 153 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 AAMDCQ9H7C9 122 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 NRN1Q9NPD7 142 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 OTORQ9NRC9 128 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 SMAD5-AS1Q9Y6J3 95 aa9.29□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 IGHV3OR16-13A0A075B7E8 117 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 IGHV3-49A0A0A0MS15 119 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 IGHV3-74A0A0B4J1X5 117 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 IGHV3-66A0A0C4DH42 116 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 C11orf94C9JXX5 98 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 F6UZH7 168 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TMEM250H0YL14 139 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 PAGE4O60829 102 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 INSL3P51460 131 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 HAGHQ16775 308 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 TCF24Q7RTU0 167 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 DYNLRB2Q8TF09 96 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 MRPL53Q96EL3 112 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 MLXQ9UH92 298 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 PRELID1Q9Y255 219 aa9.28□□□□□ -0.92
CACNA1C-IT3-201ENST00000542680 NDUFB4O95168 129 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 PAFAH1B2P68402 229 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 ICAM4Q14773 271 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 CST9LP1Q5W188 147 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 CCDC28AQ8IWP9 274 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 C5orf17Q8NAS9 161 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 RXFP4Q8TDU9 374 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 BLNKQ8WV28 456 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 HIST1H2BAQ96A08 127 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 RPUSD4Q96CM3 377 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 MCRIP2Q9BUT9 160 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 Q9H3A6 140 aa9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.93
CACNA1C-IT3-201ENST00000542680 AURKAIP1Q9NWT8 199 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms