RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 RGS21Q2M5E4 152 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 GCSAMLQ5JQS6 135 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 SPATA31B1PQ5VZV4 182 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 EBLN2Q6P2I7 272 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 BPIFA4PQ86YQ2 179 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 Q8NAQ8 132 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 OR4B1Q8NGF8 309 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 PFDN5Q99471 154 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 SLC35B3Q9H1N7 401 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 MED28Q9H204 178 aa12.25□□□□□ -0.45
CD9-209ENST00000540891 C11orf68Q9H3H3 251 aaKnown RBP12.25□□□□□ -0.45
CD9-209ENST00000540891 H3BQ15 152 aa12.24□□□□□ -0.45
CD9-209ENST00000540891 DEFB4AO15263 64 aa12.24□□□□□ -0.45
CD9-209ENST00000540891 OXA1LQ15070 435 aa12.24□□□□□ -0.45
CD9-209ENST00000540891 AMTNQ6UX39 209 aa12.24□□□□□ -0.45
CD9-209ENST00000540891 ATP5SQ99766 215 aa12.24□□□□□ -0.45
CD9-209ENST00000540891 C1QTNF4Q9BXJ3 329 aa12.24□□□□□ -0.45
CD9-209ENST00000540891 ZNF331Q9NQX6 463 aaPredicted RBP12.24□□□□□ -0.45
CD9-209ENST00000540891 H3BTX0 84 aa12.23□□□□□ -0.45
CD9-209ENST00000540891 SLC17A3O00476 420 aa12.23□□□□□ -0.45
CD9-209ENST00000540891 ZNF705DP0CH99 300 aaPredicted RBP12.23□□□□□ -0.45
CD9-209ENST00000540891 ZNF705BP0CI00 300 aaPredicted RBP12.23□□□□□ -0.45
CD9-209ENST00000540891 RBMY1A1P0DJD3 496 aaKnown RBP12.23□□□□□ -0.45
CD9-209ENST00000540891 RBMY1CP0DJD4 496 aa12.23□□□□□ -0.45
CD9-209ENST00000540891 CXCL2P19875 107 aa12.23□□□□□ -0.45
CD9-209ENST00000540891 RBMY1FQ15415 496 aaKnown RBP12.23□□□□□ -0.45
CD9-209ENST00000540891 PSG3Q16557 428 aa12.23□□□□□ -0.45
CD9-209ENST00000540891 ZNF738Q8NE65 137 aa12.23□□□□□ -0.45
CD9-209ENST00000540891 SMIM3Q9BZL3 60 aa12.23□□□□□ -0.45
CD9-209ENST00000540891 HRH4Q9H3N8 390 aa12.23□□□□□ -0.45
CD9-209ENST00000540891 IGHV4-28A0A0C4DH34 117 aa12.22□□□□□ -0.45
CD9-209ENST00000540891 PRB4P10163 310 aaPredicted RBP12.22□□□□□ -0.45
CD9-209ENST00000540891 CNN1P51911 297 aaKnown RBP12.22□□□□□ -0.45
CD9-209ENST00000540891 PSG9Q00887 426 aa12.22□□□□□ -0.45
CD9-209ENST00000540891 Q5BKY6 102 aa12.22□□□□□ -0.45
CD9-209ENST00000540891 LCN15Q6UWW0 184 aa12.22□□□□□ -0.45
CD9-209ENST00000540891 ZNF705AQ6ZN79 300 aaPredicted RBP12.22□□□□□ -0.45
CD9-209ENST00000540891 SAT2Q96F10 170 aaPredicted RBP12.22□□□□□ -0.45
CD9-209ENST00000540891 WFDC1Q9HC57 220 aa12.22□□□□□ -0.45
CD9-209ENST00000540891 RYR2Q92736 4967 aa12.22□□□□□ -0.45
CD9-209ENST00000540891 PLECQ15149 4684 aaKnown RBP12.21□□□□□ -0.45
CD9-209ENST00000540891 MIFP14174 115 aa12.21□□□□□ -0.45
CD9-209ENST00000540891 PMS2P11Q13670 270 aa12.21□□□□□ -0.45
CD9-209ENST00000540891 LRRC20Q8TCA0 184 aa12.21□□□□□ -0.45
CD9-209ENST00000540891 SLC50A1Q9BRV3 221 aa12.21□□□□□ -0.45
CD9-209ENST00000540891 ZNF586Q9NXT0 402 aa12.21□□□□□ -0.45
CD9-209ENST00000540891 GIPP09681 153 aaPredicted RBP12.2□□□□□ -0.46
CD9-209ENST00000540891 MIR17HGQ75NE6 70 aa12.2□□□□□ -0.46
CD9-209ENST00000540891 OR8A1Q8NGG7 326 aa12.2□□□□□ -0.46
CD9-209ENST00000540891 SLC25A2Q9BXI2 301 aa12.2□□□□□ -0.46
CD9-209ENST00000540891 MFFQ9GZY8 342 aa12.2□□□□□ -0.46
CD9-209ENST00000540891 TMEM14CQ9P0S9 112 aa12.2□□□□□ -0.46
CD9-209ENST00000540891 CXorf65A6NEN9 183 aa12.19□□□□□ -0.46
CD9-209ENST00000540891 ZNF705FA8MVS1 300 aaPredicted RBP12.19□□□□□ -0.46
CD9-209ENST00000540891 DUSP14O95147 198 aaKnown RBP12.19□□□□□ -0.46
CD9-209ENST00000540891 C1orf158Q8N1D5 194 aa12.19□□□□□ -0.46
CD9-209ENST00000540891 RPUSD4Q96CM3 377 aaKnown RBP12.19□□□□□ -0.46
CD9-209ENST00000540891 FAM167A-AS1Q96KT0 104 aa12.19□□□□□ -0.46
CD9-209ENST00000540891 KCNIP2Q9NS61 270 aa12.19□□□□□ -0.46
CD9-209ENST00000540891 RFNGQ9Y644 331 aa12.19□□□□□ -0.46
CD9-209ENST00000540891 C17orf112F2Z3M2 114 aa12.18□□□□□ -0.46
CD9-209ENST00000540891 CRXO43186 299 aaPredicted RBP12.18□□□□□ -0.46
CD9-209ENST00000540891 PYYP10082 97 aa12.18□□□□□ -0.46
CD9-209ENST00000540891 NANOS2P60321 138 aaKnown RBP12.18□□□□□ -0.46
CD9-209ENST00000540891 HIST1H1AQ02539 215 aaPredicted RBP12.18□□□□□ -0.46
CD9-209ENST00000540891 GUK1Q16774 197 aa12.18□□□□□ -0.46
CD9-209ENST00000540891 C11orf45Q8TAV5 145 aa12.18□□□□□ -0.46
CD9-209ENST00000540891 ASB13Q8WXK3 278 aa12.18□□□□□ -0.46
CD9-209ENST00000540891 NEU1Q99519 415 aa12.18□□□□□ -0.46
CD9-209ENST00000540891 PARD6GQ9BYG4 376 aaPredicted RBP12.18□□□□□ -0.46
CD9-209ENST00000540891 TENM2Q9NT68 2774 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 TRBV19A0A075B6N1 114 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 M0R2Z0 102 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 ZNF253O75346 499 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 NDUFB4O95168 129 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 IFNA5P01569 189 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 SPINK13Q1W4C9 94 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 SCGB1C1Q8TD33 95 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 AQP10Q96PS8 301 aa12.17□□□□□ -0.46
CD9-209ENST00000540891 LCE6AA0A183 80 aa12.16□□□□□ -0.46
CD9-209ENST00000540891 G3V3Q6 166 aa12.16□□□□□ -0.46
CD9-209ENST00000540891 HIST1H1EP10412 219 aaKnown RBP12.16□□□□□ -0.46
CD9-209ENST00000540891 FFAR4Q5NUL3 377 aa12.16□□□□□ -0.46
CD9-209ENST00000540891 CEMP1Q6PRD7 247 aaPredicted RBP12.16□□□□□ -0.46
CD9-209ENST00000540891 IGF2BP2-AS1Q96M15 143 aa12.16□□□□□ -0.46
CD9-209ENST00000540891 LYSTQ99698 3801 aa12.16□□□□□ -0.46
CD9-209ENST00000540891 MRPL32Q9BYC8 188 aaKnown RBP12.16□□□□□ -0.46
CD9-209ENST00000540891 IGHV3OR16-12A0A075B7B8 117 aa12.15□□□□□ -0.46
CD9-209ENST00000540891 NUPR2A6NF83 97 aa12.15□□□□□ -0.46
CD9-209ENST00000540891 BOLA2-SMG1P6H3BVE0 249 aa12.15□□□□□ -0.46
CD9-209ENST00000540891 PHLDA1Q8WV24 401 aaPredicted RBP12.15□□□□□ -0.46
CD9-209ENST00000540891 CELA1Q9UNI1 258 aa12.15□□□□□ -0.46
CD9-209ENST00000540891 FUT9Q9Y231 359 aa12.15□□□□□ -0.46
CD9-209ENST00000540891 AMBPP02760 352 aa12.14□□□□□ -0.47
CD9-209ENST00000540891 BAP18Q8IXM2 172 aa12.14□□□□□ -0.47
CD9-209ENST00000540891 ZNF503Q96F45 646 aa12.14□□□□□ -0.47
CD9-209ENST00000540891 OR51M1Q9H341 326 aa12.14□□□□□ -0.47
CD9-209ENST00000540891 GOLT1BQ9Y3E0 138 aa12.14□□□□□ -0.47
CD9-209ENST00000540891 DNAH1Q9P2D7 4330 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms