RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 SCGB1D2O95969 90 aa9.29□□□□□ -0.92
SEMA4D-223ENST00000540475 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
SEMA4D-223ENST00000540475 LINC00336Q6ZUF6 198 aa9.29□□□□□ -0.92
SEMA4D-223ENST00000540475 OR8A1Q8NGG7 326 aa9.29□□□□□ -0.92
SEMA4D-223ENST00000540475 ZNF431Q8TF32 576 aaPredicted RBP9.29□□□□□ -0.92
SEMA4D-223ENST00000540475 TMEM37Q8WXS4 190 aa9.29□□□□□ -0.92
SEMA4D-223ENST00000540475 MGST2Q99735 147 aa9.29□□□□□ -0.92
SEMA4D-223ENST00000540475 CCDC32Q9BV29 185 aa9.29□□□□□ -0.92
SEMA4D-223ENST00000540475 PLA2G2EQ9NZK7 142 aa9.29□□□□□ -0.92
SEMA4D-223ENST00000540475 PLAC8L1A1L4L8 177 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 LYRM9A8MSI8 78 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 M0R2Z0 102 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 GOSR2O14653 212 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 INSP01308 110 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 FGL1Q08830 312 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 VWC2Q2TAL6 325 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 LGALS9BQ3B8N2 356 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 LINC00305Q7Z4B0 112 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 CHAC2Q8WUX2 184 aa9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 ZNF331Q9NQX6 463 aaPredicted RBP9.28□□□□□ -0.92
SEMA4D-223ENST00000540475 BOLA2-SMG1P6H3BVE0 249 aa9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 CCSO14618 274 aa9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 IGLC2P0DOY2 106 aa9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 RNF212Q495C1 297 aa9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 LCN15Q6UWW0 184 aa9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 TMEM256Q8N2U0 113 aa9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 ZNF738Q8NE65 137 aa9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 SAT2Q96F10 170 aaPredicted RBP9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 C2orf50Q96LR7 162 aa9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 SLC50A1Q9BRV3 221 aa9.27□□□□□ -0.93
SEMA4D-223ENST00000540475 TRAV6A0A075B6T7 132 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 A0A1B0GVY2 172 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 PRM2P04554 102 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 ZNF846Q147U1 533 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 BPIFA4PQ86YQ2 179 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 C12orf45Q8N5I9 185 aaPredicted RBP9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 C20orf144Q9BQM9 153 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 SEC22CQ9BRL7 303 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 TMEM208Q9BTX3 173 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 DNAJC4Q9NNZ3 241 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 NUDT15Q9NV35 164 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 WDR83OSQ9Y284 106 aa9.26□□□□□ -0.93
SEMA4D-223ENST00000540475 ZNF705GA8MUZ8 300 aaPredicted RBP9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 L7N2F9 121 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 H2AFB2P0C5Z0 115 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 AZU1P20160 251 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 CDKN1BP46527 198 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 CAMLGP49069 296 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 TAS2R60P59551 318 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 DAD1P61803 113 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 VAMP2P63027 116 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 OPCMLQ14982 345 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 MORN5Q5VZ52 161 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 C10orf113Q5VZT2 155 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 Q6ZR54 194 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 NRARPQ7Z6K4 114 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 BAP18Q8IXM2 172 aa9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 RPUSD4Q96CM3 377 aaKnown RBP9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 LYRM2Q9NU23 88 aaPredicted RBP9.25□□□□□ -0.93
SEMA4D-223ENST00000540475 TRAV12-2A0A075B6T6 113 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 FAM24AA6NFZ4 105 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 RTL8CO15255 209 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 COX7A2P2O60397 106 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 CST7O76096 145 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 S100A11P31949 105 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 RPL29P47914 159 aaKnown RBP9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 HIST1H1AQ02539 215 aaPredicted RBP9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 RAB31Q13636 194 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 GUK1Q16774 197 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 TMEM88Q6PEY1 159 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 LRRC20Q8TCA0 184 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 UQCC1Q9NVA1 299 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 LSM5Q9Y4Y9 91 aaKnown RBP9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 PXMP4Q9Y6I8 212 aa9.24□□□□□ -0.93
SEMA4D-223ENST00000540475 C5orf51A6NDU8 294 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 H3BQ15 152 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 ZNF253O75346 499 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 PVALBP20472 110 aaPredicted RBP9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 SULT1A1P50225 295 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 FAM3BP58499 235 aaPredicted RBP9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 RHOBP62745 196 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 ZNF493Q6ZR52 646 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 Q6ZRG5 221 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 TMEM252Q8N6L7 170 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 C15orf53Q8NAA6 179 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 OR1L4Q8NGR5 311 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 RNASE8Q8TDE3 154 aaKnown RBP9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
SEMA4D-223ENST00000540475 FAM240BA0A1B0GVZ2 78 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 IGSF23A1L1A6 192 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 CBY3A6NI87 242 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 FAM25EA8MYX2 175 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 PRAC2D3DTV9 90 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 SLC17A3O00476 420 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 BCAP31P51572 246 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 CAV2P51636 162 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 ASAH1Q13510 395 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 ATP6V1FQ16864 119 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 MIC13Q5XKP0 118 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 S100ZQ8WXG8 99 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms