RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 V9GYV3 84 aa6.44□□□□□ -1.38
C2CD3-215ENST00000540452 A0A1W2PS18 150 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 K7EMT4 169 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 UBE2CO00762 179 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 CXCL1P09341 107 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 PSMB8P28062 276 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 TPPP2P59282 170 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 ERVFC1-1P60608 527 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 SLC35B1P78383 322 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 FOXE3Q13461 319 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 TMEM183AQ8IXX5 376 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 OR8I2Q8N0Y5 310 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 BLNKQ8WV28 456 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 GRAMD2BQ96HH9 432 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 GFRA4Q9GZZ7 299 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 PPP1R14DQ9NXH3 145 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 URGCP-MRPS24S4R325 110 aa6.43□□□□□ -1.38
C2CD3-215ENST00000540452 UTP20O75691 2785 aaKnown RBP6.42□□□□□ -1.38
C2CD3-215ENST00000540452 TACC2O95359 2948 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 SMIM27A0A1W2PRY6 76 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 C5orf52A6NGY3 159 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 LINC01548A6NM66 108 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 NPIPB6E9PJ23 425 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 IGHV4-59P01825 116 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 S100A8P05109 93 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 HNF1AP20823 631 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 COL8A1P27658 744 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 ARL3P36405 182 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 PSG3Q16557 428 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 COA6Q5JTJ3 125 aaKnown RBP6.42□□□□□ -1.38
C2CD3-215ENST00000540452 SAPCD1Q5SSQ6 148 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 WDR73Q6P4I2 378 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 CLEC19AQ6UXS0 136 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 ATP5L2Q7Z4Y8 100 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 Q86TA4 180 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 MYOZ3Q8TDC0 251 aa6.42□□□□□ -1.38
C2CD3-215ENST00000540452 ZNF331Q9NQX6 463 aaPredicted RBP6.42□□□□□ -1.38
C2CD3-215ENST00000540452 TGIF2-C20orf24A0A0A6YYL0 155 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 A0A1W2PPQ1 181 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 CLPSL1A2RUU4 121 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 C19orf71A6NCJ1 209 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 A8MWL6 223 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 DIRC3C9JPN6 131 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 PHOX2AO14813 284 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 CD5LO43866 347 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 SRSF2Q01130 221 aaKnown RBP6.41□□□□□ -1.38
C2CD3-215ENST00000540452 LY6EQ16553 131 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 C9orf152Q5JTZ5 239 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 ACTL10Q5JWF8 245 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 LEMD1Q68G75 181 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 Q6AWC8 147 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 GPHB5Q86YW7 130 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 WIPF2Q8TF74 440 aaPredicted RBP6.41□□□□□ -1.38
C2CD3-215ENST00000540452 TSKUQ8WUA8 353 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 GNB1LQ9BYB4 327 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 LENEPQ9Y5L5 61 aa6.41□□□□□ -1.38
C2CD3-215ENST00000540452 TRBV7-9A0A0J9YWB2 115 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 PGPEP1LA6NFU8 196 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 ZNF785A8K8V0 405 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 GATCO43716 136 aaKnown RBP6.4□□□□□ -1.38
C2CD3-215ENST00000540452 IGLV2-11P01706 119 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 FOXA3P55318 350 aaPredicted RBP6.4□□□□□ -1.38
C2CD3-215ENST00000540452 BLCAPP62952 87 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 FAM106AQ4KMX7 169 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 C16orf54Q6UWD8 224 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 CIARTQ8N365 385 aaPredicted RBP6.4□□□□□ -1.38
C2CD3-215ENST00000540452 GLMPQ8WWB7 406 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 DAZ1Q9NQZ3 744 aaKnown RBP6.4□□□□□ -1.38
C2CD3-215ENST00000540452 PEF1Q9UBV8 284 aaKnown RBP6.4□□□□□ -1.38
C2CD3-215ENST00000540452 NAT8BQ9UHF3 227 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 NF1P21359 2839 aa6.4□□□□□ -1.38
C2CD3-215ENST00000540452 A0A1B0GW15 77 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 ZNF320A2RRD8 509 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 XKRY2A2RUG3 117 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 IZUMO1RA6ND01 250 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 ZNF705GA8MUZ8 300 aaPredicted RBP6.39□□□□□ -1.39
C2CD3-215ENST00000540452 A8MWP6 167 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 LGALS9O00182 355 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST1H2BKO60814 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 P01737 135 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HLA-DQA1P01909 254 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 TRGC2P03986 189 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST1H2BJP06899 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 MGST1P10620 155 aaKnown RBP6.39□□□□□ -1.39
C2CD3-215ENST00000540452 PF4V1P10720 104 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST1H2BOP23527 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST1H2BBP33778 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST1H2BDP58876 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST1H2BCP62807 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST2H2BEQ16778 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.39□□□□□ -1.39
C2CD3-215ENST00000540452 GOLT1AQ6ZVE7 132 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 REC114Q7Z4M0 266 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 BCL6BQ8N143 479 aaPredicted RBP6.39□□□□□ -1.39
C2CD3-215ENST00000540452 NUDT10Q8NFP7 164 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST1H2BHQ93079 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 DAZAP1Q96EP5 407 aaKnown RBP6.39□□□□□ -1.39
C2CD3-215ENST00000540452 NUDT11Q96G61 164 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 UBE2E2Q96LR5 201 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 MS4A10Q96PG2 267 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms