RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CRXO43186 299 aaPredicted RBP7.02□□□□□ -1.29
DDB1-217ENST00000540166 SCGB1C2P0DMR2 95 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 IGHV1-2P23083 117 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 ZNF146Q15072 292 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 TTC32Q5I0X7 151 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 LINC01545Q5VT33 79 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 FAM169BQ8N8A8 192 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 OR9G1Q8NH87 305 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 WNK2Q9Y3S1 2297 aa7.02□□□□□ -1.29
DDB1-217ENST00000540166 ZZEF1O43149 2961 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 TRAV3A0A0B4J244 114 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 H3BTX0 84 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 DUTP33316 252 aaKnown RBP7.01□□□□□ -1.29
DDB1-217ENST00000540166 OR13A1Q8NGR1 328 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 IFI27L1Q96BM0 104 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 CXXC4Q9H2H0 198 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 EPDR1Q9UM22 224 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 IGKV3D-15A0A087WSY6 115 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 TMSB15BA0A087X1C1 80 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 TCTEX1D4Q5JR98 221 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 SYT8Q8NBV8 401 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 ZNF418Q8TF45 676 aaPredicted RBP7.01□□□□□ -1.29
DDB1-217ENST00000540166 MBNL3Q9NUK0 354 aaKnown RBP7.01□□□□□ -1.29
DDB1-217ENST00000540166 KALRNO60229 2985 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 FAM90A9PA6NNJ1 464 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 K7ERJ3 54 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 HBDP02042 147 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 SLC25A16P16260 332 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 SRD5A1P18405 259 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 CKS2P33552 79 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 HOXA4Q00056 320 aaPredicted RBP7.01□□□□□ -1.29
DDB1-217ENST00000540166 MZT1Q08AG7 82 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 GDF5OSQ5U4N7 250 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 CCDC144NLQ6NUI1 221 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 KLF14Q8TD94 323 aaPredicted RBP7.01□□□□□ -1.29
DDB1-217ENST00000540166 NDFIP1Q9BT67 221 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 ZNF747Q9BV97 191 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 FREM2Q5SZK8 3169 aa7.01□□□□□ -1.29
DDB1-217ENST00000540166 IGHV3-48P01763 117 aa7□□□□□ -1.29
DDB1-217ENST00000540166 ATP5G2Q06055 141 aa7□□□□□ -1.29
DDB1-217ENST00000540166 PSMG4Q5JS54 123 aa7□□□□□ -1.29
DDB1-217ENST00000540166 CCL17Q92583 94 aa7□□□□□ -1.29
DDB1-217ENST00000540166 LEAP2Q969E1 77 aa7□□□□□ -1.29
DDB1-217ENST00000540166 PRELID3AQ96N28 172 aa7□□□□□ -1.29
DDB1-217ENST00000540166 SPEGQ15772 3267 aa7□□□□□ -1.29
DDB1-217ENST00000540166 C15orf61A6NNL5 157 aa7□□□□□ -1.29
DDB1-217ENST00000540166 SIVA1O15304 175 aa7□□□□□ -1.29
DDB1-217ENST00000540166 IL4P05112 153 aa7□□□□□ -1.29
DDB1-217ENST00000540166 PRDX2P32119 198 aa7□□□□□ -1.29
DDB1-217ENST00000540166 EFNA4P52798 201 aa7□□□□□ -1.29
DDB1-217ENST00000540166 ZNF672Q499Z4 452 aaPredicted RBP7□□□□□ -1.29
DDB1-217ENST00000540166 ZFAND6Q6FIF0 208 aa7□□□□□ -1.29
DDB1-217ENST00000540166 ITPR1Q14643 2758 aa7□□□□□ -1.29
DDB1-217ENST00000540166 PLCE1Q9P212 2302 aa7□□□□□ -1.29
DDB1-217ENST00000540166 IGHV3OR15-7A0A075B7D8 119 aa7□□□□□ -1.29
DDB1-217ENST00000540166 SPRY3O43610 288 aa7□□□□□ -1.29
DDB1-217ENST00000540166 FXYD7P58549 80 aa7□□□□□ -1.29
DDB1-217ENST00000540166 KRTAP27-1Q3LI81 207 aa7□□□□□ -1.29
DDB1-217ENST00000540166 AMTNQ6UX39 209 aa7□□□□□ -1.29
DDB1-217ENST00000540166 LINC00305Q7Z4B0 112 aa7□□□□□ -1.29
DDB1-217ENST00000540166 C1orf162Q8NEQ5 155 aaPredicted RBP7□□□□□ -1.29
DDB1-217ENST00000540166 CHAC1Q9BUX1 264 aa7□□□□□ -1.29
DDB1-217ENST00000540166 DSCAMO60469 2012 aa7□□□□□ -1.29
DDB1-217ENST00000540166 CYSRT1A8MQ03 144 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 B5MCH6 92 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 C2orf91Q6ZV80 131 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 OR5AN1Q8NGI8 311 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 NEU4Q8WWR8 484 aaPredicted RBP6.99□□□□□ -1.29
DDB1-217ENST00000540166 IFI27L2Q9H2X8 130 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 NCBP2LA6PVI3 153 aaKnown RBP6.99□□□□□ -1.29
DDB1-217ENST00000540166 TNFRSF1AP19438 455 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 PRR20EP86478 221 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 PRR20CP86479 221 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 PRR20DP86480 221 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 PRR20BP86481 221 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 PRR20AP86496 221 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 MOB3BQ86TA1 216 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 PCP2Q8IVA1 136 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 LRRC75A-AS1Q8N1F1 130 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 NPIPB3Q92617 1050 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 SMPXQ9UHP9 88 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 METRNQ9UJH8 293 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 MOSP00540 346 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 MPV17P39210 176 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 GAGE5Q13069 117 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 GAGE6Q13070 117 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 SRSF9Q13242 221 aaKnown RBP eCLIP6.99□□□□□ -1.29
DDB1-217ENST00000540166 FMC1Q96HJ9 113 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 IGF2BP2-AS1Q96M15 143 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 CELSR3Q9NYQ7 3312 aa6.99□□□□□ -1.29
DDB1-217ENST00000540166 A0A1W2PRD5 423 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 A0A1W2PRF3 423 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 A0A1W2PRM7 423 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 IFI27P40305 119 aaPredicted RBP6.98□□□□□ -1.29
DDB1-217ENST00000540166 SCGB1D4Q6XE38 83 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 ACP7Q6ZNF0 438 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 BOD1L2Q8IYS8 172 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 ORMDL3Q8N138 153 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 SPAG8Q99932 426 aaPredicted RBP6.98□□□□□ -1.29
DDB1-217ENST00000540166 TMEM160Q9NX00 188 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms