RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ERASQ7Z444 233 aa11.05□□□□□ -0.64
UBE3B-210ENST00000539599 SHANK2-AS3Q9BTD1 123 aa11.05□□□□□ -0.64
UBE3B-210ENST00000539599 IGKV2-40A0A087WW87 121 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-210ENST00000539599 hDV102S1A0JD36 115 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 F8W735 103 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-210ENST00000539599 CHEK1O14757 476 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 GNG7O60262 68 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 IGKV2D-40P01614 121 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-210ENST00000539599 KLF5Q13887 457 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-210ENST00000539599 ZNF124Q15973 351 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 RBPMS2Q6ZRY4 209 aaKnown RBP11.04□□□□□ -0.64
UBE3B-210ENST00000539599 Q8TAT8 98 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 IGHV3OR16-13A0A075B7E8 117 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 IGHV3-74A0A0B4J1X5 117 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 H3BRN7 92 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 FAM106CPP0CH98 169 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 TCTAP57738 103 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 FAM106AQ4KMX7 169 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 LY6G5BQ8NDX9 201 aa11.04□□□□□ -0.64
UBE3B-210ENST00000539599 LOC105371242A0A075B767 164 aa11.03□□□□□ -0.64
UBE3B-210ENST00000539599 IGHV3-66A0A0C4DH42 116 aa11.03□□□□□ -0.64
UBE3B-210ENST00000539599 NDUFB8O95169 186 aa11.03□□□□□ -0.64
UBE3B-210ENST00000539599 APOHP02749 345 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-210ENST00000539599 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
UBE3B-210ENST00000539599 VMO1Q7Z5L0 202 aa11.03□□□□□ -0.64
UBE3B-210ENST00000539599 BPIFA4PQ86YQ2 179 aa11.03□□□□□ -0.64
UBE3B-210ENST00000539599 PSG8Q9UQ74 426 aa11.03□□□□□ -0.64
UBE3B-210ENST00000539599 BTF3P20290 206 aaKnown RBP11.03□□□□□ -0.64
UBE3B-210ENST00000539599 RASL11AQ6T310 242 aa11.03□□□□□ -0.64
UBE3B-210ENST00000539599 OR4F17Q8NGA8 305 aa11.03□□□□□ -0.64
UBE3B-210ENST00000539599 ZNF414Q96IQ9 312 aa11.03□□□□□ -0.64
UBE3B-210ENST00000539599 MRPS12O15235 138 aaKnown RBP11.02□□□□□ -0.64
UBE3B-210ENST00000539599 C5orf64Q2M2E5 130 aa11.02□□□□□ -0.64
UBE3B-210ENST00000539599 ATP5L2Q7Z4Y8 100 aa11.02□□□□□ -0.64
UBE3B-210ENST00000539599 CHRDL1Q9BU40 450 aa11.02□□□□□ -0.64
UBE3B-210ENST00000539599 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-210ENST00000539599 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
UBE3B-210ENST00000539599 ZNF492Q9P255 531 aa11.02□□□□□ -0.65
UBE3B-210ENST00000539599 TMEM213A2RRL7 107 aa11.01□□□□□ -0.65
UBE3B-210ENST00000539599 CUBNO60494 3623 aa11.01□□□□□ -0.65
UBE3B-210ENST00000539599 TMEM75Q8N9X5 138 aa11.01□□□□□ -0.65
UBE3B-210ENST00000539599 C1RLQ9NZP8 487 aa11.01□□□□□ -0.65
UBE3B-210ENST00000539599 UQCR10Q9UDW1 63 aa11.01□□□□□ -0.65
UBE3B-210ENST00000539599 NPIPB6E9PJ23 425 aa11.01□□□□□ -0.65
UBE3B-210ENST00000539599 LOXL1Q08397 574 aaPredicted RBP11.01□□□□□ -0.65
UBE3B-210ENST00000539599 FOXE3Q13461 319 aa11.01□□□□□ -0.65
UBE3B-210ENST00000539599 RAB1BQ9H0U4 201 aa11.01□□□□□ -0.65
UBE3B-210ENST00000539599 TMEM14CQ9P0S9 112 aa11.01□□□□□ -0.65
UBE3B-210ENST00000539599 IGHV3-49A0A0A0MS15 119 aa11□□□□□ -0.65
UBE3B-210ENST00000539599 LOC389332A0A1B0GUA5 103 aa11□□□□□ -0.65
UBE3B-210ENST00000539599 OR11H6Q8NGC7 330 aa11□□□□□ -0.65
UBE3B-210ENST00000539599 ARPC1AQ92747 370 aa11□□□□□ -0.65
UBE3B-210ENST00000539599 HOXB4P17483 251 aaPredicted RBP11□□□□□ -0.65
UBE3B-210ENST00000539599 TSPOP30536 169 aa11□□□□□ -0.65
UBE3B-210ENST00000539599 PSG3Q16557 428 aa11□□□□□ -0.65
UBE3B-210ENST00000539599 UNQ5815/PRO19632Q6UWF5 114 aa11□□□□□ -0.65
UBE3B-210ENST00000539599 LAMTOR2Q9Y2Q5 125 aa11□□□□□ -0.65
UBE3B-210ENST00000539599 IGLV11-55A0A075B6I3 123 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 SERTM2A0A1B0GWG4 89 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 OR4C46A6NHA9 309 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 LINC01548A6NM66 108 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 DLEU1O43261 78 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 LINC00614P0C842 121 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 LY6DQ14210 128 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 IGHV3OR16-10A0A075B7F0 116 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 ODF3BA8MYP8 253 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 NDUFA3O95167 84 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 LEPROTL1O95214 131 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 TMEM70Q9BUB7 260 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 SMKR1H3BMG3 65 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 ECSCRQ19T08 205 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 TIMD4Q96H15 378 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 VGLL1Q99990 258 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 FLNCQ14315 2725 aa10.99□□□□□ -0.65
UBE3B-210ENST00000539599 CFAP46Q8IYW2 2715 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 TRAV9-2A0A087WT02 112 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 WI2-2373I1.2A0A1W2PRP0 233 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 SNAI2O43623 268 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 CT83Q5H943 113 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 C11orf71Q6IPW1 123 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.98□□□□□ -0.65
UBE3B-210ENST00000539599 A0A1B0GUT8 65 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 M0QZK8 103 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 NCR2O95944 276 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 EGR2P11161 476 aaPredicted RBP10.98□□□□□ -0.65
UBE3B-210ENST00000539599 PRTN3P24158 256 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 ZNF80P51504 273 aaPredicted RBP10.98□□□□□ -0.65
UBE3B-210ENST00000539599 PAX2Q02962 417 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 NPBQ8NG41 125 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 SMIM12Q96EX1 92 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 C21orf62Q9NYP8 219 aa10.98□□□□□ -0.65
UBE3B-210ENST00000539599 SYS1-DBNDD2H3BUS1 97 aa10.97□□□□□ -0.65
UBE3B-210ENST00000539599 ZNF207O43670 478 aaKnown RBP10.97□□□□□ -0.65
UBE3B-210ENST00000539599 LYZL1Q6UWQ5 148 aa10.97□□□□□ -0.65
UBE3B-210ENST00000539599 AMN1Q8IY45 258 aa10.97□□□□□ -0.65
UBE3B-210ENST00000539599 RNF182Q8N6D2 247 aa10.97□□□□□ -0.65
UBE3B-210ENST00000539599 LINC00527Q9UJ94 153 aa10.97□□□□□ -0.65
UBE3B-210ENST00000539599 SELENOKQ9Y6D0 94 aa10.97□□□□□ -0.65
UBE3B-210ENST00000539599 SMAD5-AS1Q9Y6J3 95 aa10.97□□□□□ -0.65
UBE3B-210ENST00000539599 TMEM11P17152 192 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms