RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 BOLA2-SMG1P6H3BVE0 249 aa15.81■□□□□ 0.12
SCARB1-206ENST00000539320 AGPAT2O15120 278 aa15.81■□□□□ 0.12
SCARB1-206ENST00000539320 MRPS12O15235 138 aaKnown RBP15.81■□□□□ 0.12
SCARB1-206ENST00000539320 CRXO43186 299 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-206ENST00000539320 HIST1H1AQ02539 215 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-206ENST00000539320 OXA1LQ15070 435 aa15.81■□□□□ 0.12
SCARB1-206ENST00000539320 LRRC20Q8TCA0 184 aa15.81■□□□□ 0.12
SCARB1-206ENST00000539320 FAM210BQ96KR6 192 aa15.81■□□□□ 0.12
SCARB1-206ENST00000539320 CCDC32Q9BV29 185 aa15.81■□□□□ 0.12
SCARB1-206ENST00000539320 CXCL2P19875 107 aa15.8■□□□□ 0.12
SCARB1-206ENST00000539320 PSG3Q16557 428 aa15.8■□□□□ 0.12
SCARB1-206ENST00000539320 BAP18Q8IXM2 172 aa15.8■□□□□ 0.12
SCARB1-206ENST00000539320 POM121L12Q8N7R1 296 aa15.8■□□□□ 0.12
SCARB1-206ENST00000539320 OR8A1Q8NGG7 326 aa15.8■□□□□ 0.12
SCARB1-206ENST00000539320 MGST2Q99735 147 aa15.8■□□□□ 0.12
SCARB1-206ENST00000539320 C5orf51A6NDU8 294 aa15.79■□□□□ 0.12
SCARB1-206ENST00000539320 COX7A2P2O60397 106 aa15.79■□□□□ 0.12
SCARB1-206ENST00000539320 HTN3P15516 51 aa15.79■□□□□ 0.12
SCARB1-206ENST00000539320 BCAP31P51572 246 aa15.79■□□□□ 0.12
SCARB1-206ENST00000539320 CAV2P51636 162 aa15.79■□□□□ 0.12
SCARB1-206ENST00000539320 LCN15Q6UWW0 184 aa15.79■□□□□ 0.12
SCARB1-206ENST00000539320 LINC00305Q7Z4B0 112 aa15.79■□□□□ 0.12
SCARB1-206ENST00000539320 PLA2G2EQ9NZK7 142 aa15.79■□□□□ 0.12
SCARB1-206ENST00000539320 B2MP61769 119 aa15.78■□□□□ 0.12
SCARB1-206ENST00000539320 DAD1P61803 113 aa15.78■□□□□ 0.12
SCARB1-206ENST00000539320 C12orf45Q8N5I9 185 aaPredicted RBP15.78■□□□□ 0.12
SCARB1-206ENST00000539320 ZNF705GA8MUZ8 300 aaPredicted RBP15.77■□□□□ 0.12
SCARB1-206ENST00000539320 H2AFB2P0C5Z0 115 aa15.77■□□□□ 0.12
SCARB1-206ENST00000539320 RHOBP62745 196 aa15.77■□□□□ 0.12
SCARB1-206ENST00000539320 RPUSD4Q96CM3 377 aaKnown RBP15.77■□□□□ 0.12
SCARB1-206ENST00000539320 C2orf50Q96LR7 162 aa15.77■□□□□ 0.12
SCARB1-206ENST00000539320 SLC50A1Q9BRV3 221 aa15.77■□□□□ 0.12
SCARB1-206ENST00000539320 C11orf1Q9H5F2 150 aa15.77■□□□□ 0.12
SCARB1-206ENST00000539320 TRAV12-2A0A075B6T6 113 aa15.76■□□□□ 0.11
SCARB1-206ENST00000539320 CST7O76096 145 aa15.76■□□□□ 0.11
SCARB1-206ENST00000539320 PVALBP20472 110 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-206ENST00000539320 CAMLGP49069 296 aa15.76■□□□□ 0.11
SCARB1-206ENST00000539320 BPIFA4PQ86YQ2 179 aa15.76■□□□□ 0.11
SCARB1-206ENST00000539320 ZNF331Q9NQX6 463 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-206ENST00000539320 PPP1R14DQ9NXH3 145 aa15.76■□□□□ 0.11
SCARB1-206ENST00000539320 DNAH2Q9P225 4427 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 FAT2Q9NYQ8 4349 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 FAM24AA6NFZ4 105 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 TSPOP30536 169 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 S100A10P60903 97 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 RAB31Q13636 194 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 OPCMLQ14982 345 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 C10orf113Q5VZT2 155 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 UBE2DNLQ8IWF7 75 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 TMEM37Q8WXS4 190 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 UQCC1Q9NVA1 299 aa15.75■□□□□ 0.11
SCARB1-206ENST00000539320 FAM240BA0A1B0GVZ2 78 aa15.74■□□□□ 0.11
SCARB1-206ENST00000539320 LYRM9A8MSI8 78 aa15.74■□□□□ 0.11
SCARB1-206ENST00000539320 PRM2P04554 102 aa15.74■□□□□ 0.11
SCARB1-206ENST00000539320 PRB4P10163 310 aaPredicted RBP15.74■□□□□ 0.11
SCARB1-206ENST00000539320 MORN5Q5VZ52 161 aa15.74■□□□□ 0.11
SCARB1-206ENST00000539320 NRARPQ7Z6K4 114 aa15.74■□□□□ 0.11
SCARB1-206ENST00000539320 WDR83OSQ9Y284 106 aa15.74■□□□□ 0.11
SCARB1-206ENST00000539320 HERC2O95714 4834 aa15.74■□□□□ 0.11
SCARB1-206ENST00000539320 DNAH17Q9UFH2 4485 aa15.73■□□□□ 0.11
SCARB1-206ENST00000539320 SNRPCP09234 159 aaKnown RBP15.73■□□□□ 0.11
SCARB1-206ENST00000539320 MIC13Q5XKP0 118 aa15.73■□□□□ 0.11
SCARB1-206ENST00000539320 TMEM88Q6PEY1 159 aa15.73■□□□□ 0.11
SCARB1-206ENST00000539320 TMEM256Q8N2U0 113 aa15.73■□□□□ 0.11
SCARB1-206ENST00000539320 LYRM2Q9NU23 88 aaPredicted RBP15.73■□□□□ 0.11
SCARB1-206ENST00000539320 UBE2L5PA0A1B0GUS4 154 aa15.72■□□□□ 0.11
SCARB1-206ENST00000539320 SLC17A3O00476 420 aa15.72■□□□□ 0.11
SCARB1-206ENST00000539320 VWC2Q2TAL6 325 aa15.72■□□□□ 0.11
SCARB1-206ENST00000539320 MZT2BQ6NZ67 158 aa15.72■□□□□ 0.11
SCARB1-206ENST00000539320 Q6ZRG5 221 aa15.72■□□□□ 0.11
SCARB1-206ENST00000539320 LINC00336Q6ZUF6 198 aa15.72■□□□□ 0.11
SCARB1-206ENST00000539320 STX12Q86Y82 276 aa15.72■□□□□ 0.11
SCARB1-206ENST00000539320 LINC01587Q99440 93 aa15.72■□□□□ 0.11
SCARB1-206ENST00000539320 IGSF23A1L1A6 192 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 H3BTX0 84 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 IGLC2P0DOY2 106 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 CDKN1BP46527 198 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 SULT1A1P50225 295 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 TAS2R60P59551 318 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 BAXQ07812 192 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 RAB32Q13637 225 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 OR1L4Q8NGR5 311 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 PXMP4Q9Y6I8 212 aa15.71■□□□□ 0.11
SCARB1-206ENST00000539320 PLAC8L1A1L4L8 177 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 UPK1BO75841 260 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 AZU1P20160 251 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 HBG1P69891 147 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 HBG2P69892 147 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 IL15RAQ13261 267 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 ASAH1Q13510 395 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 TMEM252Q8N6L7 170 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 PFDN5Q99471 154 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 DNAJC4Q9NNZ3 241 aa15.7■□□□□ 0.1
SCARB1-206ENST00000539320 S100A11P31949 105 aa15.69■□□□□ 0.1
SCARB1-206ENST00000539320 IFITM3Q01628 133 aa15.69■□□□□ 0.1
SCARB1-206ENST00000539320 OR10J6PQ8NGY7 276 aa15.69■□□□□ 0.1
SCARB1-206ENST00000539320 C16orf74Q96GX8 76 aa15.69■□□□□ 0.1
SCARB1-206ENST00000539320 H3BQ15 152 aa15.68■□□□□ 0.1
SCARB1-206ENST00000539320 M0R2N4 97 aa15.68■□□□□ 0.1
SCARB1-206ENST00000539320 DEFB130BP0DP73 79 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms