RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 KMT2AQ03164 3969 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 CXCL3P19876 107 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 CNN1P51911 297 aaKnown RBP8.31□□□□□ -1.08
RTN3-209ENST00000538995 FXYD7P58549 80 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 DEFA1P59665 94 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 DEFA3P59666 94 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 PRR20EP86478 221 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 PRR20CP86479 221 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 PRR20DP86480 221 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 PRR20BP86481 221 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 PRR20AP86496 221 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 IFITM3Q01628 133 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 ATP6V1FQ16864 119 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 C10orf113Q5VZT2 155 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 Q6ZRG5 221 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 NRARPQ7Z6K4 114 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 BPIFA4PQ86YQ2 179 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 RNF182Q8N6D2 247 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 ZNF738Q8NE65 137 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 IGF2BP2-AS1Q96M15 143 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 PFDN5Q99471 154 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 SLC50A1Q9BRV3 221 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 NMES1Q9C002 83 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 BATF3Q9NR55 127 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 CELA1Q9UNI1 258 aa8.31□□□□□ -1.08
RTN3-209ENST00000538995 IGHV3OR16-12A0A075B7B8 117 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 UBE2L5PA0A1B0GUS4 154 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 IGSF23A1L1A6 192 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 INMT-MINDY4F8WBC2 141 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 MPDU1O75352 247 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 INSP01308 110 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 HBE1P02100 147 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 SPART-AS1P0CW21 52 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 RPL29P47914 159 aaKnown RBP8.3□□□□□ -1.08
RTN3-209ENST00000538995 B2MP61769 119 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 CYCSP99999 105 aaKnown RBP8.3□□□□□ -1.08
RTN3-209ENST00000538995 PSG3Q16557 428 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 C12orf74Q32Q52 190 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 C1orf158Q8N1D5 194 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 OR11H7Q8NGC8 314 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 OR8A1Q8NGG7 326 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 OR1L4Q8NGR5 311 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 LRRC20Q8TCA0 184 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 TMEM37Q8WXS4 190 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 MARVELD1Q9BSK0 173 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 RNF126Q9BV68 326 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 DNAJC4Q9NNZ3 241 aa8.3□□□□□ -1.08
RTN3-209ENST00000538995 VPS13DQ5THJ4 4388 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 IGLL5B9A064 214 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 E5RGE8 158 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 BOLA2-SMG1P6H3BVE0 249 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 RLN2P04090 185 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 BAXQ07812 192 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 OPCMLQ14982 345 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 MIC13Q5XKP0 118 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 IGFL4Q6B9Z1 124 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 SLC25A31Q9H0C2 315 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 ZNF331Q9NQX6 463 aaPredicted RBP8.29□□□□□ -1.08
RTN3-209ENST00000538995 SLC39A9Q9NUM3 307 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 APLNQ9ULZ1 77 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 PXMP4Q9Y6I8 212 aa8.29□□□□□ -1.08
RTN3-209ENST00000538995 DEFB131BA0A096LNP1 70 aa8.28□□□□□ -1.08
RTN3-209ENST00000538995 LOC102723971A0A1B0GUV8 181 aa8.28□□□□□ -1.08
RTN3-209ENST00000538995 IGLC2P0DOY2 106 aa8.28□□□□□ -1.08
RTN3-209ENST00000538995 HIST1H1AQ02539 215 aaPredicted RBP8.28□□□□□ -1.08
RTN3-209ENST00000538995 GUK1Q16774 197 aa8.28□□□□□ -1.08
RTN3-209ENST00000538995 SPINK13Q1W4C9 94 aa8.28□□□□□ -1.08
RTN3-209ENST00000538995 RRN3P1Q2M238 152 aa8.28□□□□□ -1.08
RTN3-209ENST00000538995 RPUSD4Q96CM3 377 aaKnown RBP8.28□□□□□ -1.08
RTN3-209ENST00000538995 TMEM208Q9BTX3 173 aa8.28□□□□□ -1.08
RTN3-209ENST00000538995 DKK2Q9UBU2 259 aa8.28□□□□□ -1.08
RTN3-209ENST00000538995 DNAH6Q9C0G6 4158 aa8.28□□□□□ -1.08
RTN3-209ENST00000538995 IGHV4-4A0A075B6R2 117 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 M0R2Z0 102 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 CRXO43186 299 aaPredicted RBP8.27□□□□□ -1.09
RTN3-209ENST00000538995 ZNF253O75346 499 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 FGF7P21781 194 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 TSPOP30536 169 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 OXA1LQ15070 435 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 MORN5Q5VZ52 161 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 TMEM256Q8N2U0 113 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 FAM210BQ96KR6 192 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 NPCDR1Q9BY65 106 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 KCNIP2Q9NS61 270 aa8.27□□□□□ -1.09
RTN3-209ENST00000538995 SIX6O95475 246 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 PET100P0DJ07 73 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 EMP1P54849 157 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 RHOBP62745 196 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 FAM222AQ5U5X8 452 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 BAP18Q8IXM2 172 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 OR5C1Q8NGR4 320 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 SAT2Q96F10 170 aaPredicted RBP8.26□□□□□ -1.09
RTN3-209ENST00000538995 NIPSNAP3BQ9BS92 247 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 PPP1R14DQ9NXH3 145 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 TMEM14CQ9P0S9 112 aa8.26□□□□□ -1.09
RTN3-209ENST00000538995 YTHDF2Q9Y5A9 579 aaKnown RBP8.26□□□□□ -1.09
RTN3-209ENST00000538995 H0YIZ8 118 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 H3BQ15 152 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 SLC17A3O00476 420 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 CDKN1BP46527 198 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms