RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TMEM256Q8N2U0 113 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 ARL6Q9H0F7 186 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 FLVCR2Q9UPI3 526 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 NACAE9PAV3 2078 aa8.79□□□□□ -1
VAMP1-206ENST00000538970 F5H768 121 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 TAS2R60P59551 318 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 RHOBP62745 196 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 FCN2Q15485 313 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 BAK1Q16611 211 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 S100A7AQ86SG5 101 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 LINC01587Q99440 93 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 ATG101Q9BSB4 218 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 RBM38Q9H0Z9 239 aaKnown RBP8.78□□□□□ -1
VAMP1-206ENST00000538970 ARV1Q9H2C2 271 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 NPVFQ9HCQ7 196 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 MGAT4CQ9UBM8 478 aa8.78□□□□□ -1
VAMP1-206ENST00000538970 TSC22D2O75157 780 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 SCGB1D2O95969 90 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 ATP5G1P05496 136 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 PRB4P10163 310 aaPredicted RBP8.77□□□□□ -1.01
VAMP1-206ENST00000538970 CXCL2P19875 107 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 BTCP35070 178 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 CDKN1BP46527 198 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 ATP5G3P48201 142 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 INPP1P49441 399 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 IAH1Q2TAA2 248 aaPredicted RBP8.77□□□□□ -1.01
VAMP1-206ENST00000538970 TRIQKQ629K1 86 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 TEPPQ6URK8 271 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 ZNF546Q86UE3 836 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 OR10P1Q8NGE3 313 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 ZNRF2Q8NHG8 242 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 LRRC20Q8TCA0 184 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 RPUSD4Q96CM3 377 aaKnown RBP8.77□□□□□ -1.01
VAMP1-206ENST00000538970 C16orf74Q96GX8 76 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 PPP1R14DQ9NXH3 145 aa8.77□□□□□ -1.01
VAMP1-206ENST00000538970 RCL1Q9Y2P8 373 aaKnown RBP8.77□□□□□ -1.01
VAMP1-206ENST00000538970 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
VAMP1-206ENST00000538970 CBY3A6NI87 242 aa8.76□□□□□ -1.01
VAMP1-206ENST00000538970 NUDT3O95989 172 aa8.76□□□□□ -1.01
VAMP1-206ENST00000538970 ANXA7P20073 488 aaKnown RBP8.76□□□□□ -1.01
VAMP1-206ENST00000538970 TAS2R30P59541 319 aa8.76□□□□□ -1.01
VAMP1-206ENST00000538970 ARL16Q0P5N6 197 aa8.76□□□□□ -1.01
VAMP1-206ENST00000538970 C4orf46Q504U0 113 aa8.76□□□□□ -1.01
VAMP1-206ENST00000538970 PXDC1Q5TGL8 231 aa8.76□□□□□ -1.01
VAMP1-206ENST00000538970 LCN15Q6UWW0 184 aa8.76□□□□□ -1.01
VAMP1-206ENST00000538970 ZBTB8BQ8NAP8 495 aaPredicted RBP8.76□□□□□ -1.01
VAMP1-206ENST00000538970 RNASE8Q8TDE3 154 aaKnown RBP8.76□□□□□ -1.01
VAMP1-206ENST00000538970 ZNF331Q9NQX6 463 aaPredicted RBP8.76□□□□□ -1.01
VAMP1-206ENST00000538970 RNF24Q9Y225 148 aa8.76□□□□□ -1.01
VAMP1-206ENST00000538970 AGPAT2O15120 278 aa8.75□□□□□ -1.01
VAMP1-206ENST00000538970 HTN1P15515 57 aa8.75□□□□□ -1.01
VAMP1-206ENST00000538970 TNP2Q05952 138 aa8.75□□□□□ -1.01
VAMP1-206ENST00000538970 ZNF493Q6ZR52 646 aa8.75□□□□□ -1.01
VAMP1-206ENST00000538970 LINC00305Q7Z4B0 112 aa8.75□□□□□ -1.01
VAMP1-206ENST00000538970 TMEM263Q8WUH6 116 aaKnown RBP8.75□□□□□ -1.01
VAMP1-206ENST00000538970 MITD1Q8WV92 249 aa8.75□□□□□ -1.01
VAMP1-206ENST00000538970 RNF141Q8WVD5 230 aa8.75□□□□□ -1.01
VAMP1-206ENST00000538970 SDHCQ99643 169 aaPredicted RBP8.75□□□□□ -1.01
VAMP1-206ENST00000538970 SLC50A1Q9BRV3 221 aa8.75□□□□□ -1.01
VAMP1-206ENST00000538970 TIMM8BQ9Y5J9 83 aaPredicted RBP8.75□□□□□ -1.01
VAMP1-206ENST00000538970 LINC00854A0A1B0GVQ3 168 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 C7orf66A4D0T2 115 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 H7BYZ3 331 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 ZNF701M0R085 212 aaPredicted RBP8.74□□□□□ -1.01
VAMP1-206ENST00000538970 SLC17A3O00476 420 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 GOSR2O14653 212 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 SNRPCP09234 159 aaKnown RBP8.74□□□□□ -1.01
VAMP1-206ENST00000538970 KIR3DS1Q14943 382 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 MORN5Q5VZ52 161 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 BPIFA4PQ86YQ2 179 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 C6orf223Q8N319 242 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 TMEM37Q8WXS4 190 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 MGST2Q99735 147 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 GGACTQ9BVM4 153 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 PARD6GQ9BYG4 376 aaPredicted RBP8.74□□□□□ -1.01
VAMP1-206ENST00000538970 NOP10Q9NPE3 64 aaKnown RBP8.74□□□□□ -1.01
VAMP1-206ENST00000538970 GSKIPQ9P0R6 139 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 LINC00588Q9Y4M8 146 aa8.74□□□□□ -1.01
VAMP1-206ENST00000538970 CENPXA8MT69 81 aa8.73□□□□□ -1.01
VAMP1-206ENST00000538970 PRAC2D3DTV9 90 aa8.73□□□□□ -1.01
VAMP1-206ENST00000538970 H3BTX0 84 aa8.73□□□□□ -1.01
VAMP1-206ENST00000538970 COX7A2P2O60397 106 aa8.73□□□□□ -1.01
VAMP1-206ENST00000538970 MBPP02686 304 aaPredicted RBP8.73□□□□□ -1.01
VAMP1-206ENST00000538970 IGLC2P0DOY2 106 aa8.73□□□□□ -1.01
VAMP1-206ENST00000538970 CCL18P55774 89 aa8.73□□□□□ -1.01
VAMP1-206ENST00000538970 GFI1BQ5VTD9 330 aa8.73□□□□□ -1.01
VAMP1-206ENST00000538970 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
VAMP1-206ENST00000538970 IL7P13232 177 aa8.72□□□□□ -1.01
VAMP1-206ENST00000538970 OPCMLQ14982 345 aa8.72□□□□□ -1.01
VAMP1-206ENST00000538970 C10orf113Q5VZT2 155 aa8.72□□□□□ -1.01
VAMP1-206ENST00000538970 MAPKAPK5-AS1Q8N8E1 139 aa8.72□□□□□ -1.01
VAMP1-206ENST00000538970 OR10J6PQ8NGY7 276 aa8.72□□□□□ -1.01
VAMP1-206ENST00000538970 H3BQ15 152 aa8.71□□□□□ -1.02
VAMP1-206ENST00000538970 CCSO14618 274 aa8.71□□□□□ -1.02
VAMP1-206ENST00000538970 CAMLGP49069 296 aa8.71□□□□□ -1.02
VAMP1-206ENST00000538970 CLINT1Q14677 625 aa8.71□□□□□ -1.02
VAMP1-206ENST00000538970 CNPY1Q3B7I2 92 aa8.71□□□□□ -1.02
VAMP1-206ENST00000538970 SSX7Q7RTT5 188 aa8.71□□□□□ -1.02
VAMP1-206ENST00000538970 SAT2Q96F10 170 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms