RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 GOSR2O14653 212 aa10.72□□□□□ -0.69
RAB40B-202ENST00000538809 PRAF2O60831 178 aa10.72□□□□□ -0.69
RAB40B-202ENST00000538809 PVALBP20472 110 aaPredicted RBP10.72□□□□□ -0.69
RAB40B-202ENST00000538809 C1orf158Q8N1D5 194 aa10.72□□□□□ -0.69
RAB40B-202ENST00000538809 ZNF738Q8NE65 137 aa10.72□□□□□ -0.69
RAB40B-202ENST00000538809 UQCC1Q9NVA1 299 aa10.72□□□□□ -0.69
RAB40B-202ENST00000538809 RFNGQ9Y644 331 aa10.72□□□□□ -0.69
RAB40B-202ENST00000538809 SMIM9A6NGZ8 99 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 M0R2Z0 102 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 SIX6O95475 246 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 CXCL3P19876 107 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 CAMLGP49069 296 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 CNN1P51911 297 aaKnown RBP10.71□□□□□ -0.69
RAB40B-202ENST00000538809 SPINK13Q1W4C9 94 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 MORN5Q5VZ52 161 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 LINC00305Q7Z4B0 112 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 S100A7AQ86SG5 101 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 OR11H7Q8NGC8 314 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 CHAC2Q8WUX2 184 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 NMES1Q9C002 83 aa10.71□□□□□ -0.69
RAB40B-202ENST00000538809 LOC102723971A0A1B0GUV8 181 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 TMEM189A5PLL7 270 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 HBE1P02100 147 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 AMBPP02760 352 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 SNRPCP09234 159 aaKnown RBP10.7□□□□□ -0.7
RAB40B-202ENST00000538809 SPART-AS1P0CW21 52 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 S100A11P31949 105 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 OPCMLQ14982 345 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 FAM222AQ5U5X8 452 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 MIC13Q5XKP0 118 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 RNF126Q9BV68 326 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 RNF24Q9Y225 148 aa10.7□□□□□ -0.7
RAB40B-202ENST00000538809 H0YIZ8 118 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 COX7A2P2O60397 106 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 DUSP14O95147 198 aaKnown RBP10.69□□□□□ -0.7
RAB40B-202ENST00000538809 CXCL2P19875 107 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 RPL29P47914 159 aaKnown RBP10.69□□□□□ -0.7
RAB40B-202ENST00000538809 STX12Q86Y82 276 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 BAP18Q8IXM2 172 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 LRRC20Q8TCA0 184 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 IGF2BP2-AS1Q96M15 143 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 TMEM208Q9BTX3 173 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 PLA2G2EQ9NZK7 142 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 DKK2Q9UBU2 259 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 NACAE9PAV3 2078 aa10.69□□□□□ -0.7
RAB40B-202ENST00000538809 UBE2L5PA0A1B0GUS4 154 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 CRXO43186 299 aaPredicted RBP10.68□□□□□ -0.7
RAB40B-202ENST00000538809 INSP01308 110 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 H2BFSP57053 126 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 HBG1P69891 147 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 HBG2P69892 147 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 HIST1H1AQ02539 215 aaPredicted RBP10.68□□□□□ -0.7
RAB40B-202ENST00000538809 PSG3Q16557 428 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 ATP6V1FQ16864 119 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 RRN3P1Q2M238 152 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 C10orf113Q5VZT2 155 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 ZNF331Q9NQX6 463 aaPredicted RBP10.68□□□□□ -0.7
RAB40B-202ENST00000538809 OR5AC2Q9NZP5 309 aa10.68□□□□□ -0.7
RAB40B-202ENST00000538809 YTHDF2Q9Y5A9 579 aaKnown RBP10.68□□□□□ -0.7
RAB40B-202ENST00000538809 TRAV12-2A0A075B6T6 113 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 H3BTX0 84 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 PRM2P04554 102 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 DEFA1P59665 94 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 DEFA3P59666 94 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 NHLH2Q02577 135 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 BAXQ07812 192 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 RAB31Q13636 194 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 LCN15Q6UWW0 184 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 BPIFA4PQ86YQ2 179 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 NIPSNAP3BQ9BS92 247 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 DNAJC4Q9NNZ3 241 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 SLC39A9Q9NUM3 307 aa10.67□□□□□ -0.7
RAB40B-202ENST00000538809 ZNF705GA8MUZ8 300 aaPredicted RBP10.66□□□□□ -0.7
RAB40B-202ENST00000538809 E5RGE8 158 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 BOLA2-SMG1P6H3BVE0 249 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 SLC17A3O00476 420 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 HTN3P15516 51 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 FGF7P21781 194 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 B2MP61769 119 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 RHOBP62745 196 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 CYCSP99999 105 aaKnown RBP10.66□□□□□ -0.7
RAB40B-202ENST00000538809 Q6ZRG5 221 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 OR8A1Q8NGG7 326 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 OR1L4Q8NGR5 311 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 SAT2Q96F10 170 aaPredicted RBP10.66□□□□□ -0.7
RAB40B-202ENST00000538809 SLC50A1Q9BRV3 221 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 NDUFAF3Q9BU61 184 aa10.66□□□□□ -0.7
RAB40B-202ENST00000538809 TRAV5A0A0B4J249 113 aa10.65□□□□□ -0.7
RAB40B-202ENST00000538809 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.7
RAB40B-202ENST00000538809 H3BQ15 152 aa10.65□□□□□ -0.7
RAB40B-202ENST00000538809 LRRC37A5PQ49AS3 106 aa10.65□□□□□ -0.7
RAB40B-202ENST00000538809 OR5C1Q8NGR4 320 aa10.65□□□□□ -0.7
RAB40B-202ENST00000538809 RPUSD4Q96CM3 377 aaKnown RBP10.65□□□□□ -0.7
RAB40B-202ENST00000538809 PFDN5Q99471 154 aa10.65□□□□□ -0.7
RAB40B-202ENST00000538809 NPCDR1Q9BY65 106 aa10.65□□□□□ -0.7
RAB40B-202ENST00000538809 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.7
RAB40B-202ENST00000538809 MPDU1O75352 247 aa10.64□□□□□ -0.71
RAB40B-202ENST00000538809 RLN2P04090 185 aa10.64□□□□□ -0.71
RAB40B-202ENST00000538809 PPP1R1CQ8WVI7 109 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms