RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 GNG12Q9UBI6 72 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 TRAV40A0A0B4J280 105 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 DEFB108AA8MXU0 73 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 C9JAW5 83 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 M0R2P5 195 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 TGFAP01135 160 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 GLRXP35754 106 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 RPL13AP40429 203 aaKnown RBP9.86□□□□□ -0.83
USP3-203ENST00000538686 FXYD7P58549 80 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 RFESDQ8TAC1 157 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 C21orf62Q9NYP8 219 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 HIGD1AQ9Y241 93 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 HEATR1Q9H583 2144 aaKnown RBP9.85□□□□□ -0.83
USP3-203ENST00000538686 B9A039 149 aa9.85□□□□□ -0.83
USP3-203ENST00000538686 FAM90A1Q86YD7 464 aa9.85□□□□□ -0.83
USP3-203ENST00000538686 WFDC3Q8IUB2 231 aa9.85□□□□□ -0.83
USP3-203ENST00000538686 TMEM75Q8N9X5 138 aa9.85□□□□□ -0.83
USP3-203ENST00000538686 OR13A1Q8NGR1 328 aa9.85□□□□□ -0.83
USP3-203ENST00000538686 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
USP3-203ENST00000538686 AGRNO00468 2067 aa9.85□□□□□ -0.83
USP3-203ENST00000538686 INS-IGF2F8WCM5 200 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 UPK2O00526 184 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 NPFFO15130 113 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 NDUFA7O95182 113 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 ERHP84090 104 aaKnown RBP9.84□□□□□ -0.83
USP3-203ENST00000538686 PRNTQ86SH4 94 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 WDR86Q86TI4 376 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 OR4C13Q8NGP0 309 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 AAMDCQ9H7C9 122 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 CALYQ9NYX4 217 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 PROCRQ9UNN8 238 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 SEC16AO15027 2179 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 TMSB15BA0A087X1C1 80 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 TRAV8-1A0A0A6YYK1 113 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 TRAV2A0A0B4J234 112 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 Q6ZQT7 251 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 FAM19A5Q7Z5A7 132 aaPredicted RBP9.84□□□□□ -0.83
USP3-203ENST00000538686 FAM57AQ8TBR7 257 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 MYOZ3Q8TDC0 251 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 ODF3Q96PU9 254 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 PRADC1Q9BSG0 188 aa9.84□□□□□ -0.83
USP3-203ENST00000538686 TRBV7-7A0A0K0K1E9 115 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 LGALS1P09382 135 aaKnown RBP9.83□□□□□ -0.84
USP3-203ENST00000538686 RPL39P5Q59GN2 51 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 TMEM219Q86XT9 240 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 C11orf53Q8IXP5 236 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 NPIPB3Q92617 1050 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 MRPL20Q9BYC9 149 aaKnown RBP9.83□□□□□ -0.84
USP3-203ENST00000538686 IMUPQ9GZP8 106 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 MRPL35Q9NZE8 188 aaKnown RBP9.83□□□□□ -0.84
USP3-203ENST00000538686 FAM240AA0A1B0GVK7 77 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 IGLV2-11P01706 119 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 GP9P14770 177 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 RPL7P18124 248 aaKnown RBP9.83□□□□□ -0.84
USP3-203ENST00000538686 MRAPQ8TCY5 172 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 BAALCQ8WXS3 180 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 FLYWCH2Q96CP2 140 aaKnown RBP9.83□□□□□ -0.84
USP3-203ENST00000538686 FZR1Q9UM11 496 aa9.83□□□□□ -0.84
USP3-203ENST00000538686 IGHV3OR15-7A0A075B7D8 119 aa9.82□□□□□ -0.84
USP3-203ENST00000538686 TRAV12-1A0A0B4J245 112 aa9.82□□□□□ -0.84
USP3-203ENST00000538686 UQCRQO14949 82 aa9.82□□□□□ -0.84
USP3-203ENST00000538686 MRPL33O75394 65 aaKnown RBP9.82□□□□□ -0.84
USP3-203ENST00000538686 ATP5G1P05496 136 aa9.82□□□□□ -0.84
USP3-203ENST00000538686 C9orf153Q5TBE3 101 aa9.82□□□□□ -0.84
USP3-203ENST00000538686 NDUFA11Q86Y39 141 aa9.82□□□□□ -0.84
USP3-203ENST00000538686 ZCCHC24Q8N2G6 241 aaKnown RBP9.82□□□□□ -0.84
USP3-203ENST00000538686 C3orf22Q8N5N4 141 aa9.82□□□□□ -0.84
USP3-203ENST00000538686 LINC01548A6NM66 108 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 CD7P09564 240 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 ORM2P19652 201 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 HLA-DMBP28068 263 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 MFAP4P55083 255 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 FOXC1Q12948 553 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 LYZL1Q6UWQ5 148 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 PLXDC1Q8IUK5 500 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 Q8N1Y9 231 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 TIMD4Q96H15 378 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 RAXQ9Y2V3 346 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 CXCL13O43927 109 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
USP3-203ENST00000538686 MLANAQ16655 118 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 GOLT1AQ6ZVE7 132 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 GGNQ86UU5 652 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 C17orf82Q86X59 251 aaPredicted RBP9.81□□□□□ -0.84
USP3-203ENST00000538686 C10orf126Q8N4M7 172 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 TMEM101Q96IK0 257 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 TMEM14CQ9P0S9 112 aa9.81□□□□□ -0.84
USP3-203ENST00000538686 F8VRH5 84 aa9.8□□□□□ -0.84
USP3-203ENST00000538686 H7C1H1 209 aa9.8□□□□□ -0.84
USP3-203ENST00000538686 SPINK2P20155 84 aa9.8□□□□□ -0.84
USP3-203ENST00000538686 TNFAIP6P98066 277 aaPredicted RBP9.8□□□□□ -0.84
USP3-203ENST00000538686 Q8N8P6 123 aa9.8□□□□□ -0.84
USP3-203ENST00000538686 ONECUT1Q9UBC0 465 aa9.8□□□□□ -0.84
USP3-203ENST00000538686 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
USP3-203ENST00000538686 IGKV1D-37A0A075B6S9 117 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 A0A096LPE4 126 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 A0A1W2PPZ6 126 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 TIMM23O14925 209 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 B3GALT5-AS1P59052 145 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 UTF1Q5T230 341 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms