RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 GNPNAT1Q96EK6 184 aaPredicted RBP9.72□□□□□ -0.85
SMARCA4-206ENST00000538456 NOP10Q9NPE3 64 aaKnown RBP9.72□□□□□ -0.85
SMARCA4-206ENST00000538456 GPR132Q9UNW8 380 aa9.72□□□□□ -0.85
SMARCA4-206ENST00000538456 TIMM8BQ9Y5J9 83 aaPredicted RBP9.72□□□□□ -0.85
SMARCA4-206ENST00000538456 TRAV26-1A0A087WT03 109 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 A0A0J9YY99 117 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 INAFM2P0DMQ5 153 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 IAPPP10997 89 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 GATA2P23769 480 aaPredicted RBP9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 RHOBP62745 196 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 HIST1H1AQ02539 215 aaPredicted RBP9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 GGNBP1Q5YKI7 109 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 THAP8Q8NA92 274 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 OR1B1Q8NGR6 318 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 C16orf74Q96GX8 76 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 PPP1R14DQ9NXH3 145 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 KCNIP3Q9Y2W7 256 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 ALG5Q9Y673 324 aa9.71□□□□□ -0.86
SMARCA4-206ENST00000538456 A0A0B4J2A0 478 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 IL5P05113 134 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 AKR1C4P17516 323 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 BTF3P20290 206 aaKnown RBP9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 ATP5IP56385 69 aaPredicted RBP9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 TAS2R60P59551 318 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 RAB11AP62491 216 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 TMEM144Q7Z5S9 345 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 TMEM256Q8N2U0 113 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 OR4D5Q8NGN0 318 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 GPR82Q96P67 336 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 TMEM147Q9BVK8 224 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 ZNF586Q9NXT0 402 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 SHPKQ9UHJ6 478 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 FLVCR2Q9UPI3 526 aa9.7□□□□□ -0.86
SMARCA4-206ENST00000538456 PFDN1O60925 122 aa9.69□□□□□ -0.86
SMARCA4-206ENST00000538456 CFDP00746 253 aaPredicted RBP9.69□□□□□ -0.86
SMARCA4-206ENST00000538456 M6PRP20645 277 aa9.69□□□□□ -0.86
SMARCA4-206ENST00000538456 ESRGQ1W209 222 aa9.69□□□□□ -0.86
SMARCA4-206ENST00000538456 TMEM182Q6ZP80 229 aaPredicted RBP9.69□□□□□ -0.86
SMARCA4-206ENST00000538456 BPIFCQ8NFQ6 507 aa9.69□□□□□ -0.86
SMARCA4-206ENST00000538456 SCGB3A2Q96PL1 93 aa9.69□□□□□ -0.86
SMARCA4-206ENST00000538456 SLC45A2Q9UMX9 530 aa9.69□□□□□ -0.86
SMARCA4-206ENST00000538456 MYCBP2O75592 4640 aa9.68□□□□□ -0.86
SMARCA4-206ENST00000538456 OR8A1Q8NGG7 326 aa9.68□□□□□ -0.86
SMARCA4-206ENST00000538456 OR10J6PQ8NGY7 276 aa9.68□□□□□ -0.86
SMARCA4-206ENST00000538456 RNASE8Q8TDE3 154 aaKnown RBP9.68□□□□□ -0.86
SMARCA4-206ENST00000538456 RXFP4Q8TDU9 374 aa9.68□□□□□ -0.86
SMARCA4-206ENST00000538456 TMEM263Q8WUH6 116 aaKnown RBP9.68□□□□□ -0.86
SMARCA4-206ENST00000538456 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
SMARCA4-206ENST00000538456 GPN1Q9HCN4 374 aaPredicted RBP9.68□□□□□ -0.86
SMARCA4-206ENST00000538456 FLG2Q5D862 2391 aaPredicted RBP9.67□□□□□ -0.86
SMARCA4-206ENST00000538456 A0A1W2PPQ1 181 aa9.67□□□□□ -0.86
SMARCA4-206ENST00000538456 ANXA7P20073 488 aaKnown RBP9.67□□□□□ -0.86
SMARCA4-206ENST00000538456 HOXA5P20719 270 aa9.67□□□□□ -0.86
SMARCA4-206ENST00000538456 LINC00315P59091 139 aa9.67□□□□□ -0.86
SMARCA4-206ENST00000538456 UBE2MP61081 183 aaKnown RBP9.67□□□□□ -0.86
SMARCA4-206ENST00000538456 AKR1C1Q04828 323 aa9.67□□□□□ -0.86
SMARCA4-206ENST00000538456 MRPS16Q9Y3D3 137 aaKnown RBP9.67□□□□□ -0.86
SMARCA4-206ENST00000538456 FAT1Q14517 4588 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 GAGE12BA1L429 117 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 H3BRN7 92 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 GAGE7O76087 117 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 GAGE12FP0CL80 117 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 GAGE12GP0CL81 117 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 GAGE12IP0CL82 117 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 ANXA3P12429 323 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 RRAS2P62070 204 aaPredicted RBP9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 SRPXP78539 464 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 Q5VSD8 79 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 ZNF503Q96F45 646 aa9.66□□□□□ -0.86
SMARCA4-206ENST00000538456 PRSS46E5RG02 174 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 PITX3O75364 302 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 ADAP1O75689 374 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 OR4E1P0C645 316 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 RPL7P18124 248 aaKnown RBP9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 CXCL3P19876 107 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 S100A7P31151 101 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 CDKN1BP46527 198 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 KIR3DS1Q14943 382 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 TMED4Q7Z7H5 227 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 AKAP14Q86UN6 197 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 LRRC20Q8TCA0 184 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 SEC22CQ9BRL7 303 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 SHANK2-AS3Q9BTD1 123 aa9.65□□□□□ -0.86
SMARCA4-206ENST00000538456 H3BP45 60 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 H7BYZ3 331 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 WRBO00258 174 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 RLN2P04090 185 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 XGP55808 180 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 RAP2BP61225 183 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 PSG3Q16557 428 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 C4orf46Q504U0 113 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 TMEM128Q5BJH2 165 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 ACOT7LQ6ZUV0 252 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 ZNF431Q8TF32 576 aaPredicted RBP9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 RPUSD4Q96CM3 377 aaKnown RBP9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 PARD6GQ9BYG4 376 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms