RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 FAM90A2PQ658T7 463 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 GREB1Q4ZG55 1949 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 A0A087WWL8 130 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 C15orf62A8K5M9 175 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 PDE6HQ13956 83 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 LCTP09848 1927 aa13.61□□□□□ -0.23
SCARB1-205ENST00000538291 INS-IGF2F8WCM5 200 aa13.61□□□□□ -0.23
SCARB1-205ENST00000538291 DAD1P61803 113 aa13.61□□□□□ -0.23
SCARB1-205ENST00000538291 LIME1Q9H400 295 aa13.61□□□□□ -0.23
SCARB1-205ENST00000538291 TRAV8-1A0A0A6YYK1 113 aa13.61□□□□□ -0.23
SCARB1-205ENST00000538291 LINC00205P59089 165 aa13.61□□□□□ -0.23
SCARB1-205ENST00000538291 RPRMLQ8N4K4 120 aa13.61□□□□□ -0.23
SCARB1-205ENST00000538291 A0A1B0GW64 132 aa13.61□□□□□ -0.23
SCARB1-205ENST00000538291 CEACAM8P31997 349 aaPredicted RBP13.6□□□□□ -0.23
SCARB1-205ENST00000538291 XCL2Q9UBD3 114 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 PDCD11Q14690 1871 aaKnown RBP13.6□□□□□ -0.23
SCARB1-205ENST00000538291 MYMXA0A1B0GTQ4 84 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 F5H768 121 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 NUP35Q8NFH5 326 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 NDUFAF3Q9BU61 184 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 CYTL1Q9NRR1 136 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 IGHV2-70DA0A0C4DH43 119 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 A0A1W2PPI3 338 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 J3QLI3 93 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 RHODO00212 210 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 LY6G5BQ8NDX9 201 aa13.6□□□□□ -0.23
SCARB1-205ENST00000538291 NDUFB8O95169 186 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 Q8TCH9 128 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 SPAG8Q99932 426 aaPredicted RBP13.59□□□□□ -0.23
SCARB1-205ENST00000538291 MED12Q93074 2177 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 QRFPP83859 136 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 MEGF9Q9H1U4 602 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 SCN5AQ14524 2016 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 E9PQ18 207 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 RNF144BQ7Z419 303 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 LEPROTO15243 131 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 SPOCK3Q9BQ16 436 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 PRIMA1Q86XR5 153 aa13.59□□□□□ -0.23
SCARB1-205ENST00000538291 MCRIP2Q9BUT9 160 aaKnown RBP13.59□□□□□ -0.23
SCARB1-205ENST00000538291 TRPT1Q86TN4 253 aaKnown RBP13.58□□□□□ -0.24
SCARB1-205ENST00000538291 LGALS1P09382 135 aaKnown RBP13.58□□□□□ -0.24
SCARB1-205ENST00000538291 ARMS2P0C7Q2 107 aa13.58□□□□□ -0.24
SCARB1-205ENST00000538291 GATA4P43694 442 aa13.58□□□□□ -0.24
SCARB1-205ENST00000538291 Q86TA4 180 aa13.58□□□□□ -0.24
SCARB1-205ENST00000538291 SPTAN1Q13813 2472 aaKnown RBP13.58□□□□□ -0.24
SCARB1-205ENST00000538291 MLANAQ16655 118 aa13.58□□□□□ -0.24
SCARB1-205ENST00000538291 TMEM158Q8WZ71 300 aa13.58□□□□□ -0.24
SCARB1-205ENST00000538291 IL17RELQ6ZVW7 336 aa13.57□□□□□ -0.24
SCARB1-205ENST00000538291 NYNRINQ9P2P1 1898 aaKnown RBP13.57□□□□□ -0.24
SCARB1-205ENST00000538291 GPR179Q6PRD1 2367 aa13.57□□□□□ -0.24
SCARB1-205ENST00000538291 CFHR2P36980 270 aa13.57□□□□□ -0.24
SCARB1-205ENST00000538291 SAMD5Q5TGI4 173 aa13.57□□□□□ -0.24
SCARB1-205ENST00000538291 TIMM21Q9BVV7 248 aa13.57□□□□□ -0.24
SCARB1-205ENST00000538291 ZNF581Q9P0T4 197 aa13.57□□□□□ -0.24
SCARB1-205ENST00000538291 MST1LQ2TV78 715 aa13.57□□□□□ -0.24
SCARB1-205ENST00000538291 PRR31Q5SQ13 230 aa13.57□□□□□ -0.24
SCARB1-205ENST00000538291 DMRTC2Q8IXT2 367 aaPredicted RBP13.57□□□□□ -0.24
SCARB1-205ENST00000538291 YPEL3P61236 119 aaPredicted RBP13.57□□□□□ -0.24
SCARB1-205ENST00000538291 HIST1H2BLQ99880 126 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 OVOL2Q9BRP0 275 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 DKK1O94907 266 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 GAGE13Q4V321 117 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 SSBP2P81877 361 aaPredicted RBP13.56□□□□□ -0.24
SCARB1-205ENST00000538291 ANAPC10Q9UM13 185 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 NBASA2RRP1 2371 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 ZNF561-AS1K7EIQ3 104 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 PCP4P48539 62 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 CXCL1P09341 107 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 APOC4P55056 127 aa13.56□□□□□ -0.24
SCARB1-205ENST00000538291 SPINK13Q1W4C9 94 aa13.55□□□□□ -0.24
SCARB1-205ENST00000538291 BCL6BQ8N143 479 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-205ENST00000538291 GAGE12JA6NER3 117 aa13.55□□□□□ -0.24
SCARB1-205ENST00000538291 KNCNA6PVL3 124 aa13.55□□□□□ -0.24
SCARB1-205ENST00000538291 GAGE1Q13065 139 aa13.55□□□□□ -0.24
SCARB1-205ENST00000538291 GAGE4Q13068 117 aa13.55□□□□□ -0.24
SCARB1-205ENST00000538291 GAGE5Q13069 117 aa13.55□□□□□ -0.24
SCARB1-205ENST00000538291 AMN1Q8IY45 258 aa13.55□□□□□ -0.24
SCARB1-205ENST00000538291 ZNRD1Q9P1U0 126 aa13.54□□□□□ -0.24
SCARB1-205ENST00000538291 A0A0G2JRQ6 117 aa13.54□□□□□ -0.24
SCARB1-205ENST00000538291 G3V318 75 aa13.54□□□□□ -0.24
SCARB1-205ENST00000538291 SPXQ9BT56 116 aa13.54□□□□□ -0.24
SCARB1-205ENST00000538291 GUSBP1Q15486 140 aa13.54□□□□□ -0.24
SCARB1-205ENST00000538291 USF3Q68DE3 2245 aa13.54□□□□□ -0.24
SCARB1-205ENST00000538291 Q71RC1 249 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-205ENST00000538291 LMO1P25800 156 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 HEATR1Q9H583 2144 aaKnown RBP13.53□□□□□ -0.24
SCARB1-205ENST00000538291 NCOR1P1Q9H4R4 102 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 TRBV25-1A0A075B6N4 114 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 SMKR1H3BMG3 65 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 CFHR3Q02985 330 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 HAPLN4Q86UW8 402 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 Q6ZRM9 215 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 PLA2G2CQ5R387 149 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 C1orf194Q5T5A4 169 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 C1orf122Q6ZSJ8 110 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 GFRA4Q9GZZ7 299 aa13.53□□□□□ -0.24
SCARB1-205ENST00000538291 TCTEX1D4Q5JR98 221 aa13.52□□□□□ -0.24
SCARB1-205ENST00000538291 PKDREJQ9NTG1 2253 aa13.52□□□□□ -0.24
SCARB1-205ENST00000538291 DNAJC30Q96LL9 226 aa13.52□□□□□ -0.24
SCARB1-205ENST00000538291 KLF12Q9Y4X4 402 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms