RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 RAXQ9Y2V3 346 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 EML6Q6ZMW3 1958 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 KIAA0100Q14667 2235 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 CNTRLQ7Z7A1 2325 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 IGHV3-43A0A0B4J1X8 118 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 DEFB108AA8MXU0 73 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 C15orf65H3BRN8 121 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 M0R2P5 195 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 IGHV3-43DP0DP04 118 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 ORM2P19652 201 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 MRPL51Q4U2R6 128 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 LINC00305Q7Z4B0 112 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 AMN1Q8IY45 258 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 NFAM1Q8NET5 270 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 OBP2BQ9NPH6 170 aa6.78□□□□□ -1.32
SRGAP1-202ENST00000537556 ZFAND5O76080 213 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 PRCDQ00LT1 54 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 TMEM219Q86XT9 240 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 ODF3Q96PU9 254 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 NXT2Q9NPJ8 142 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 MED12Q93074 2177 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 F5H768 121 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 PSPNO60542 156 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 GFERP55789 205 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 FOXC1Q12948 553 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 HES3Q5TGS1 186 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 C1orf53Q5VUE5 145 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 C1orf162Q8NEQ5 155 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 ONECUT1Q9UBC0 465 aa6.77□□□□□ -1.33
SRGAP1-202ENST00000537556 LTBP2Q14767 1821 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 A0A0J9YW62 118 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 LINC01546A6NGU7 62 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 SS18L1O75177 396 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 PROP1O75360 226 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 MNX1P50219 401 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 HERVK_113P63121 156 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 PATE2Q6UY27 113 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 PRNTQ86SH4 94 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 Q8N1Y9 231 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 BAALCQ8WXS3 180 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 DEFB118Q96PH6 123 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 MRPL35Q9NZE8 188 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 DYSFO75923 2080 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 TET2Q6N021 2002 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 TRBV6-1A0A0K0K1D8 114 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 UQCRQO14949 82 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 DUX1O43812 170 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 SPINK2P20155 84 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 C6orf15Q6UXA7 325 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 RPS19BP1Q86WX3 136 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 MYOZ3Q8TDC0 251 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 FLYWCH2Q96CP2 140 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 DUX5Q96PT3 197 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 Q9H3A6 140 aa6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 TNRC6BQ9UPQ9 1833 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-202ENST00000537556 ZNF474Q6S9Z5 364 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 SRXN1Q9BYN0 137 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 GNG12Q9UBI6 72 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 IGHV3OR15-7A0A075B7D8 119 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 LILRA5A6NI73 299 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 LGALS1P09382 135 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 CECR9P0C854 216 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 RPL13AP40429 203 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 NPIPB3Q92617 1050 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 TIMD4Q96H15 378 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 MRPL20Q9BYC9 149 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 FSTL3O95633 263 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 IGLC6P0CF74 106 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 MLANAQ16655 118 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 TMEM155Q4W5P6 130 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 NDUFA11Q86Y39 141 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 IMUPQ9GZP8 106 aa6.75□□□□□ -1.33
SRGAP1-202ENST00000537556 CABIN1Q9Y6J0 2220 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 DNAH14Q0VDD8 3507 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 TRBV7-7A0A0K0K1E9 115 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 OOSP1A8MZH6 123 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 TIMM23O14925 209 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 CD7P09564 240 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 SUB1P53999 127 aaKnown RBP eCLIP6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 TNFAIP6P98066 277 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 SCGB1D4Q6XE38 83 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 SLC25A39Q9BZJ4 359 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 OTORQ9NRC9 128 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 ASCC3Q8N3C0 2202 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 CEP192Q8TEP8 1941 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 RNASE2P10153 161 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 UCNP55089 124 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 LYZL1Q6UWQ5 148 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 SLC22A18ASQ8N1D0 253 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 OR4C13Q8NGP0 309 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 ZNRF2Q8NHG8 242 aa6.74□□□□□ -1.33
SRGAP1-202ENST00000537556 ZNF785A8K8V0 405 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 PLAUP00749 431 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 HLA-DMBP28068 263 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 ERHP84090 104 aaKnown RBP6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 RPL39P5Q59GN2 51 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms