RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 LINC00854A0A1B0GVQ3 168 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 CCDC160A6NGH7 325 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 F5H768 121 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 NUDT3O95989 172 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 SNRPCP09234 159 aaKnown RBP5.93□□□□□ -1.46
USP28-203ENST00000537490 OR4E1P0C645 316 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 ANXA7P20073 488 aaKnown RBP5.93□□□□□ -1.46
USP28-203ENST00000537490 SELENOTP62341 195 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 SLC38A11Q08AI6 406 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 ARL16Q0P5N6 197 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 SOHLH1Q5JUK2 328 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 LRRC20Q8TCA0 184 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 ATG101Q9BSB4 218 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 ARL6Q9H0F7 186 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 ARV1Q9H2C2 271 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 NPVFQ9HCQ7 196 aa5.93□□□□□ -1.46
USP28-203ENST00000537490 NACAE9PAV3 2078 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 NAP1L6A6NFF2 107 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 CBY3A6NI87 242 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 FNDC10F2Z333 226 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 K7EPK0 472 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 SCGB1D2O95969 90 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 ATP5G1P05496 136 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 HTN1P15515 57 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 ATP5G3P48201 142 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 FAM3BP58499 235 aaPredicted RBP5.92□□□□□ -1.46
USP28-203ENST00000537490 TAS2R60P59551 318 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 TNP2Q05952 138 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 KIR3DS1Q14943 382 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 IAH1Q2TAA2 248 aaPredicted RBP5.92□□□□□ -1.46
USP28-203ENST00000537490 OR10P1Q8NGE3 313 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 ZNRF2Q8NHG8 242 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 RPUSD4Q96CM3 377 aaKnown RBP5.92□□□□□ -1.46
USP28-203ENST00000537490 SDHCQ99643 169 aaPredicted RBP5.92□□□□□ -1.46
USP28-203ENST00000537490 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 RBM38Q9H0Z9 239 aaKnown RBP5.92□□□□□ -1.46
USP28-203ENST00000537490 PPP1R14DQ9NXH3 145 aa5.92□□□□□ -1.46
USP28-203ENST00000537490 NBDYA0A0U1RRE5 68 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 PRAC2D3DTV9 90 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 H3BTX0 84 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 GOSR2O14653 212 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 AGPAT2O15120 278 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 BTCP35070 178 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 CDKN1BP46527 198 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 INPP1P49441 399 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 TAS2R30P59541 319 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 C4orf46Q504U0 113 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 SPANXN2Q5MJ10 180 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 MORN5Q5VZ52 161 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 TRIQKQ629K1 86 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 TEPPQ6URK8 271 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 LINC00305Q7Z4B0 112 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 TMEM256Q8N2U0 113 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 ZBTB8BQ8NAP8 495 aaPredicted RBP5.91□□□□□ -1.46
USP28-203ENST00000537490 RNF141Q8WVD5 230 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 TMEM37Q8WXS4 190 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 C16orf74Q96GX8 76 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 PARD6GQ9BYG4 376 aaPredicted RBP5.91□□□□□ -1.46
USP28-203ENST00000537490 NOP10Q9NPE3 64 aaKnown RBP5.91□□□□□ -1.46
USP28-203ENST00000537490 ZNF331Q9NQX6 463 aaPredicted RBP5.91□□□□□ -1.46
USP28-203ENST00000537490 GSKIPQ9P0R6 139 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 MGAT4CQ9UBM8 478 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 RCL1Q9Y2P8 373 aaKnown RBP5.91□□□□□ -1.46
USP28-203ENST00000537490 LINC00588Q9Y4M8 146 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 TIMM8BQ9Y5J9 83 aaPredicted RBP5.91□□□□□ -1.46
USP28-203ENST00000537490 MUC4Q99102 2169 aa5.91□□□□□ -1.46
USP28-203ENST00000537490 C7orf66A4D0T2 115 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 SLC17A3O00476 420 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 TSC22D2O75157 780 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 MBPP02686 304 aaPredicted RBP5.9□□□□□ -1.46
USP28-203ENST00000537490 CXCL2P19875 107 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 CCL18P55774 89 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 PXDC1Q5TGL8 231 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 LCN15Q6UWW0 184 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 ZNF493Q6ZR52 646 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 S100A7AQ86SG5 101 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 ZNF546Q86UE3 836 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 C6orf223Q8N319 242 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 RNASE8Q8TDE3 154 aaKnown RBP5.9□□□□□ -1.46
USP28-203ENST00000537490 MGST2Q99735 147 aa5.9□□□□□ -1.46
USP28-203ENST00000537490 TRAV5A0A0B4J249 113 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 H3BQ15 152 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 H7BYZ3 331 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 CCSO14618 274 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 COX7A2P2O60397 106 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 OR5I1Q13606 314 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 OPCMLQ14982 345 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 GFI1BQ5VTD9 330 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 SSX7Q7RTT5 188 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 BPIFA4PQ86YQ2 179 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 LINC00612Q8N6U2 182 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 TMEM263Q8WUH6 116 aaKnown RBP5.89□□□□□ -1.47
USP28-203ENST00000537490 MITD1Q8WV92 249 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 SAT2Q96F10 170 aaPredicted RBP5.89□□□□□ -1.47
USP28-203ENST00000537490 SLC50A1Q9BRV3 221 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 GGACTQ9BVM4 153 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 RNF24Q9Y225 148 aa5.89□□□□□ -1.47
USP28-203ENST00000537490 PKD1P98161 4303 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 PKHD1P08F94 4074 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 CENPXA8MT69 81 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms