RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SIGLEC15Q6ZMC9 328 aa13.13□□□□□ -0.31
TNFRSF1A-209ENST00000536717 HYDINQ4G0P3 5121 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 SERF2P84101 59 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 ACOT6Q3I5F7 207 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 GCSAMLQ5JQS6 135 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 C9orf62Q8N4C0 152 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 IL17DQ8TAD2 202 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 GPR82Q96P67 336 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 SH3BGRL3Q9H299 93 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 RFNGQ9Y644 331 aa13.12□□□□□ -0.31
TNFRSF1A-209ENST00000536717 RPL7P18124 248 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-209ENST00000536717 GALR1P47211 349 aa13.11□□□□□ -0.31
TNFRSF1A-209ENST00000536717 FAM78BQ5VT40 261 aa13.11□□□□□ -0.31
TNFRSF1A-209ENST00000536717 SLC25A32Q9H2D1 315 aa13.11□□□□□ -0.31
TNFRSF1A-209ENST00000536717 A0A0J9YWU9 116 aa13.1□□□□□ -0.31
TNFRSF1A-209ENST00000536717 MBP02144 154 aa13.1□□□□□ -0.31
TNFRSF1A-209ENST00000536717 M6PRP20645 277 aa13.1□□□□□ -0.31
TNFRSF1A-209ENST00000536717 ZNF688P0C7X2 276 aa13.09□□□□□ -0.31
TNFRSF1A-209ENST00000536717 TPT1P13693 172 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-209ENST00000536717 RHOBP62745 196 aa13.09□□□□□ -0.31
TNFRSF1A-209ENST00000536717 MRPL32Q9BYC8 188 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-209ENST00000536717 LCE6AA0A183 80 aa13.08□□□□□ -0.31
TNFRSF1A-209ENST00000536717 NKX2-5P52952 324 aaPredicted RBP13.08□□□□□ -0.31
TNFRSF1A-209ENST00000536717 MORN5Q5VZ52 161 aa13.08□□□□□ -0.31
TNFRSF1A-209ENST00000536717 BPIFA4PQ86YQ2 179 aa13.08□□□□□ -0.31
TNFRSF1A-209ENST00000536717 BAP18Q8IXM2 172 aa13.08□□□□□ -0.31
TNFRSF1A-209ENST00000536717 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.31
TNFRSF1A-209ENST00000536717 NRN1Q9NPD7 142 aa13.08□□□□□ -0.31
TNFRSF1A-209ENST00000536717 ALMS1Q8TCU4 4167 aa13.08□□□□□ -0.32
TNFRSF1A-209ENST00000536717 SPP1P10451 314 aa13.08□□□□□ -0.32
TNFRSF1A-209ENST00000536717 RAB2AP61019 212 aa13.08□□□□□ -0.32
TNFRSF1A-209ENST00000536717 OR10G4Q8NGN3 311 aa13.08□□□□□ -0.32
TNFRSF1A-209ENST00000536717 OR10G9Q8NGN4 311 aa13.08□□□□□ -0.32
TNFRSF1A-209ENST00000536717 OR10G7Q8NGN6 311 aa13.08□□□□□ -0.32
TNFRSF1A-209ENST00000536717 STOML3Q8TAV4 291 aa13.08□□□□□ -0.32
TNFRSF1A-209ENST00000536717 FUT9Q9Y231 359 aa13.08□□□□□ -0.32
TNFRSF1A-209ENST00000536717 A0A1W2PPV4 95 aa13.07□□□□□ -0.32
TNFRSF1A-209ENST00000536717 ATF4P18848 351 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-209ENST00000536717 AKR1C8PQ5T2L2 129 aa13.07□□□□□ -0.32
TNFRSF1A-209ENST00000536717 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-209ENST00000536717 SLC51BQ86UW2 128 aa13.07□□□□□ -0.32
TNFRSF1A-209ENST00000536717 STHQ8IWL8 128 aa13.07□□□□□ -0.32
TNFRSF1A-209ENST00000536717 TRAV5A0A0B4J249 113 aa13.06□□□□□ -0.32
TNFRSF1A-209ENST00000536717 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
TNFRSF1A-209ENST00000536717 CA1P00915 261 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-209ENST00000536717 SEC11BP0C7V7 166 aa13.06□□□□□ -0.32
TNFRSF1A-209ENST00000536717 TMEM41BQ5BJD5 291 aa13.06□□□□□ -0.32
TNFRSF1A-209ENST00000536717 FAM122CQ6P4D5 195 aa13.06□□□□□ -0.32
TNFRSF1A-209ENST00000536717 MIR17HGQ75NE6 70 aa13.06□□□□□ -0.32
TNFRSF1A-209ENST00000536717 MEOX2P50222 304 aa13.05□□□□□ -0.32
TNFRSF1A-209ENST00000536717 TAS2R45P59539 299 aa13.05□□□□□ -0.32
TNFRSF1A-209ENST00000536717 SPATA31B1PQ5VZV4 182 aa13.05□□□□□ -0.32
TNFRSF1A-209ENST00000536717 EIF5AL1Q6IS14 154 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-209ENST00000536717 GIG44P09565 113 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-209ENST00000536717 CDC34P49427 236 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-209ENST00000536717 KHDC3LQ587J8 217 aa13.04□□□□□ -0.32
TNFRSF1A-209ENST00000536717 PSMG4Q5JS54 123 aa13.04□□□□□ -0.32
TNFRSF1A-209ENST00000536717 SAMD13Q5VXD3 122 aa13.04□□□□□ -0.32
TNFRSF1A-209ENST00000536717 RARRES2Q99969 163 aa13.04□□□□□ -0.32
TNFRSF1A-209ENST00000536717 SLC25A2Q9BXI2 301 aa13.04□□□□□ -0.32
TNFRSF1A-209ENST00000536717 RPRMQ9NS64 109 aa13.04□□□□□ -0.32
TNFRSF1A-209ENST00000536717 MRPS12O15235 138 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 ACTL10Q5JWF8 245 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 RPP25LQ8N5L8 163 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 OR11H2Q8NH07 326 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 ACTR3CQ9C0K3 210 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 TMEM14CQ9P0S9 112 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 A0A087X0K7 114 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 UMAD1C9J7I0 102 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 OR7C2O60412 319 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 TMED6Q8WW62 240 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 HRH4Q9H3N8 390 aa13.03□□□□□ -0.32
TNFRSF1A-209ENST00000536717 IGLC2P0DOY2 106 aa13.02□□□□□ -0.33
TNFRSF1A-209ENST00000536717 ID1P41134 155 aa13.02□□□□□ -0.33
TNFRSF1A-209ENST00000536717 SNRPD3P62318 126 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-209ENST00000536717 PMS2P11Q13670 270 aa13.02□□□□□ -0.33
TNFRSF1A-209ENST00000536717 GUK1Q16774 197 aa13.02□□□□□ -0.33
TNFRSF1A-209ENST00000536717 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.02□□□□□ -0.33
TNFRSF1A-209ENST00000536717 LRRC20Q8TCA0 184 aa13.02□□□□□ -0.33
TNFRSF1A-209ENST00000536717 C16orf92Q96LL3 132 aa13.02□□□□□ -0.33
TNFRSF1A-209ENST00000536717 PAXXQ9BUH6 204 aa13.02□□□□□ -0.33
TNFRSF1A-209ENST00000536717 PYYP10082 97 aa13.01□□□□□ -0.33
TNFRSF1A-209ENST00000536717 MORN3Q6PF18 240 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-209ENST00000536717 LCN15Q6UWW0 184 aa13.01□□□□□ -0.33
TNFRSF1A-209ENST00000536717 PQLC2Q6ZP29 291 aa13.01□□□□□ -0.33
TNFRSF1A-209ENST00000536717 RAB24Q969Q5 203 aa13.01□□□□□ -0.33
TNFRSF1A-209ENST00000536717 BOLA1Q9Y3E2 137 aa13.01□□□□□ -0.33
TNFRSF1A-209ENST00000536717 CXorf65A6NEN9 183 aa13□□□□□ -0.33
TNFRSF1A-209ENST00000536717 ISLRO14498 428 aa13□□□□□ -0.33
TNFRSF1A-209ENST00000536717 SNRPCP09234 159 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-209ENST00000536717 HIST1H1EP10412 219 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-209ENST00000536717 PSMB3P49720 205 aa13□□□□□ -0.33
TNFRSF1A-209ENST00000536717 C17orf77Q96MU5 243 aa13□□□□□ -0.33
TNFRSF1A-209ENST00000536717 CTXND1A0A1B0GTU2 59 aa12.99□□□□□ -0.33
TNFRSF1A-209ENST00000536717 H3BQ15 152 aa12.99□□□□□ -0.33
TNFRSF1A-209ENST00000536717 SOCS3O14543 225 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms