RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TRRAPQ9Y4A5 3859 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 IGHV1-18A0A0C4DH31 117 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 SH2D7A6NKC9 451 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-216ENST00000536548 K7EP34 96 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 CIDEAO60543 219 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 IGHV3-13P01766 116 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 IGHV3-7P01780 117 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 IGHG3P01860 377 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 TCRAP04437 139 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 NBEAP1P0C6P0 100 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 SMIM17P0DL12 118 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 GATA4P43694 442 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 GNG5P63218 68 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 C3orf36Q3SXR2 165 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 VMA21Q3ZAQ7 101 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 MORN5Q5VZ52 161 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 ALKBH2Q6NS38 261 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 UFSP1Q6NVU6 142 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 PATE2Q6UY27 113 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 C1orf229Q6ZS94 237 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-216ENST00000536548 CNEP1R1Q8N9A8 125 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 FER1L6-AS1Q8NA97 138 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 FAM57AQ8TBR7 257 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 NPIPB3Q92617 1050 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 LEAP2Q969E1 77 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 FLYWCH2Q96CP2 140 aaKnown RBP6.22□□□□□ -1.41
CPSF7-216ENST00000536548 MEGF9Q9H1U4 602 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 AP5S1Q9NUS5 200 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 BEX4Q9NWD9 120 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-216ENST00000536548 FZR1Q9UM11 496 aa6.22□□□□□ -1.41
CPSF7-216ENST00000536548 CHTOPQ9Y3Y2 248 aaKnown RBP6.22□□□□□ -1.41
CPSF7-216ENST00000536548 MGAM2Q2M2H8 2515 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 A0A087X0K7 114 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 TRAV8-6A0A0B4J262 113 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 A0A1B0GUT8 65 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 A0A1W2PPR1 153 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 VWC2LB2RUY7 222 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 K7EQM0 130 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 FSTL3O95633 263 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 PLP1P60201 277 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 MEF2CQ06413 473 aaPredicted RBP6.21□□□□□ -1.42
CPSF7-216ENST00000536548 MLANAQ16655 118 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 LGALS9BQ3B8N2 356 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 LGALS9CQ6DKI2 356 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 HIST2H2BDQ6DRA6 164 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 C16orf54Q6UWD8 224 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 ZNF841Q6ZN19 808 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 LINC00173Q6ZV60 143 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 C2orf91Q6ZV80 131 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 BHLHA15Q7RTS1 189 aaPredicted RBP6.21□□□□□ -1.42
CPSF7-216ENST00000536548 Q86TA4 180 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 MAPK1IP1LQ8NDC0 245 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 OR10W1Q8NGF6 305 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 OR4C13Q8NGP0 309 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 PRSS3P2Q8NHM4 247 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 BLNKQ8WV28 456 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 GTSF1Q8WW33 167 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 ITLN1Q8WWA0 313 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 SARAFQ96BY9 339 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 ZNF747Q9BV97 191 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 Q9H3A6 140 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 TMEM14CQ9P0S9 112 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 RPH3ALQ9UNE2 315 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 PROCRQ9UNN8 238 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 LINC00312Q9Y6C7 94 aa6.21□□□□□ -1.42
CPSF7-216ENST00000536548 ZNF407Q9C0G0 2248 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 IGKV1D-37A0A075B6S9 117 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 G3V4G9 280 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 APOHP02749 345 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-216ENST00000536548 CRYGCP07315 174 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 CT45A10P0DMU9 189 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 SCGB1A1P11684 91 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 MC5RP33032 325 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 GLRXP35754 106 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 KIR2DL2P43627 348 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-216ENST00000536548 ZNF137PP52743 207 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 HOXA4Q00056 320 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-216ENST00000536548 ERASQ7Z444 233 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 C8orf31Q8N9H6 132 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 TEX45Q8NA69 505 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 OR1B1Q8NGR6 318 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 OR2K2Q8NGT1 345 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 C8orf46Q8TAG6 207 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 TMEM186Q96B77 213 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 GAFA1Q96PS6 74 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 MRPL20Q9BYC9 149 aaKnown RBP6.2□□□□□ -1.42
CPSF7-216ENST00000536548 PLSCR4Q9NRQ2 329 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 JKAMPQ9P055 326 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 HIGD1AQ9Y241 93 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 MED12Q93074 2177 aa6.2□□□□□ -1.42
CPSF7-216ENST00000536548 ABCA1O95477 2261 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 A0A0G2JLM5 398 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 A0A0G2JNJ9 132 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 H0Y8G0 127 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 SPRY3O43610 288 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 IGKV1-16P04430 117 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 GP9P14770 177 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 ORM2P19652 201 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 APOBEC3AP31941 199 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms