RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ZNF705BP0CI00 300 aaPredicted RBP13.07□□□□□ -0.32
DDX55-204ENST00000536079 HLA-DRB4P13762 266 aa13.07□□□□□ -0.32
DDX55-204ENST00000536079 Q6ZWC4 215 aa13.07□□□□□ -0.32
DDX55-204ENST00000536079 INO80EQ8NBZ0 244 aaPredicted RBP13.07□□□□□ -0.32
DDX55-204ENST00000536079 RNF183Q96D59 192 aa13.07□□□□□ -0.32
DDX55-204ENST00000536079 SAT2Q96F10 170 aaPredicted RBP13.07□□□□□ -0.32
DDX55-204ENST00000536079 EDA2RQ9HAV5 297 aa13.07□□□□□ -0.32
DDX55-204ENST00000536079 HLA-DRB4X5D2U9 266 aa13.07□□□□□ -0.32
DDX55-204ENST00000536079 A0A0J9YX75 114 aa13.06□□□□□ -0.32
DDX55-204ENST00000536079 ARPC5O15511 151 aa13.06□□□□□ -0.32
DDX55-204ENST00000536079 SPRY2O43597 315 aa13.06□□□□□ -0.32
DDX55-204ENST00000536079 RPL7L1Q6DKI1 246 aaKnown RBP13.06□□□□□ -0.32
DDX55-204ENST00000536079 FOXI2Q6ZQN5 318 aa13.06□□□□□ -0.32
DDX55-204ENST00000536079 HSD17B11Q8NBQ5 300 aa13.06□□□□□ -0.32
DDX55-204ENST00000536079 ST6GAL2Q96JF0 529 aa13.06□□□□□ -0.32
DDX55-204ENST00000536079 HRH4Q9H3N8 390 aa13.06□□□□□ -0.32
DDX55-204ENST00000536079 ZNF331Q9NQX6 463 aaPredicted RBP13.06□□□□□ -0.32
DDX55-204ENST00000536079 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
DDX55-204ENST00000536079 FXYD7P58549 80 aa13.05□□□□□ -0.32
DDX55-204ENST00000536079 ZNF503Q96F45 646 aa13.05□□□□□ -0.32
DDX55-204ENST00000536079 WWC2-AS2Q96NR7 200 aa13.05□□□□□ -0.32
DDX55-204ENST00000536079 SH3BGRL3Q9H299 93 aa13.05□□□□□ -0.32
DDX55-204ENST00000536079 KCNIP2Q9NS61 270 aa13.05□□□□□ -0.32
DDX55-204ENST00000536079 TMEM14CQ9P0S9 112 aa13.05□□□□□ -0.32
DDX55-204ENST00000536079 FUT9Q9Y231 359 aa13.05□□□□□ -0.32
DDX55-204ENST00000536079 ZNF705FA8MVS1 300 aaPredicted RBP13.04□□□□□ -0.32
DDX55-204ENST00000536079 NDUFB4O95168 129 aa13.04□□□□□ -0.32
DDX55-204ENST00000536079 ATP6V0CP27449 155 aa13.04□□□□□ -0.32
DDX55-204ENST00000536079 RAB2AP61019 212 aa13.04□□□□□ -0.32
DDX55-204ENST00000536079 SAMD13Q5VXD3 122 aa13.04□□□□□ -0.32
DDX55-204ENST00000536079 CYTL1Q9NRR1 136 aa13.04□□□□□ -0.32
DDX55-204ENST00000536079 RPRMQ9NS64 109 aa13.04□□□□□ -0.32
DDX55-204ENST00000536079 RNF24Q9Y225 148 aa13.04□□□□□ -0.32
DDX55-204ENST00000536079 TP53TG1Q9Y2A0 90 aa13.04□□□□□ -0.32
DDX55-204ENST00000536079 hCG_2014768A0A024R1R8 64 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 TRBV19A0A075B6N1 114 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 SPP1P10451 314 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 ZNF266Q14584 549 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 PSG3Q16557 428 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 LCN15Q6UWW0 184 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 CSNK1G2-AS1Q8NCQ2 148 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 ZNF738Q8NE65 137 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 OR4B1Q8NGF8 309 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 MFFQ9GZY8 342 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
DDX55-204ENST00000536079 PRAC2D3DTV9 90 aa13.02□□□□□ -0.33
DDX55-204ENST00000536079 OR10J4P0C629 311 aa13.02□□□□□ -0.33
DDX55-204ENST00000536079 HIST1H1EP10412 219 aaKnown RBP13.02□□□□□ -0.33
DDX55-204ENST00000536079 CXCL2P19875 107 aa13.02□□□□□ -0.33
DDX55-204ENST00000536079 MORN3Q6PF18 240 aaPredicted RBP13.02□□□□□ -0.33
DDX55-204ENST00000536079 AMTNQ6UX39 209 aa13.02□□□□□ -0.33
DDX55-204ENST00000536079 LRRC20Q8TCA0 184 aa13.02□□□□□ -0.33
DDX55-204ENST00000536079 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
DDX55-204ENST00000536079 FXYD5Q96DB9 178 aa13.02□□□□□ -0.33
DDX55-204ENST00000536079 MRPL32Q9BYC8 188 aaKnown RBP13.02□□□□□ -0.33
DDX55-204ENST00000536079 SLC35B3Q9H1N7 401 aa13.02□□□□□ -0.33
DDX55-204ENST00000536079 A0A1B0GVG6 124 aa13.01□□□□□ -0.33
DDX55-204ENST00000536079 A8MTW9 85 aa13.01□□□□□ -0.33
DDX55-204ENST00000536079 CNN1P51911 297 aaKnown RBP13.01□□□□□ -0.33
DDX55-204ENST00000536079 EBLN2Q6P2I7 272 aa13.01□□□□□ -0.33
DDX55-204ENST00000536079 SLC50A1Q9BRV3 221 aa13.01□□□□□ -0.33
DDX55-204ENST00000536079 OR51M1Q9H341 326 aa13.01□□□□□ -0.33
DDX55-204ENST00000536079 XCL2Q9UBD3 114 aa13.01□□□□□ -0.33
DDX55-204ENST00000536079 M6PRP20645 277 aa13□□□□□ -0.33
DDX55-204ENST00000536079 ACOT6Q3I5F7 207 aaPredicted RBP13□□□□□ -0.33
DDX55-204ENST00000536079 FAM122CQ6P4D5 195 aa13□□□□□ -0.33
DDX55-204ENST00000536079 OR2G3Q8NGZ4 309 aa13□□□□□ -0.33
DDX55-204ENST00000536079 RPUSD4Q96CM3 377 aaKnown RBP13□□□□□ -0.33
DDX55-204ENST00000536079 CLUHP3Q96NS8 147 aa13□□□□□ -0.33
DDX55-204ENST00000536079 PAXXQ9BUH6 204 aa13□□□□□ -0.33
DDX55-204ENST00000536079 HMGB3O15347 200 aaKnown RBP12.99□□□□□ -0.33
DDX55-204ENST00000536079 RHOBP62745 196 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 PSG9Q00887 426 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 CD300CQ08708 224 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 GUK1Q16774 197 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 KCNRGQ8N5I3 272 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 RPP25LQ8N5L8 163 aaKnown RBP12.99□□□□□ -0.33
DDX55-204ENST00000536079 OR8A1Q8NGG7 326 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 OR10G4Q8NGN3 311 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 OR10G9Q8NGN4 311 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 OR10G7Q8NGN6 311 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 OR11H2Q8NH07 326 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 RNF141Q8WVD5 230 aa12.99□□□□□ -0.33
DDX55-204ENST00000536079 PSMG3Q9BT73 122 aaPredicted RBP12.99□□□□□ -0.33
DDX55-204ENST00000536079 A0A0J9YWU9 116 aa12.98□□□□□ -0.33
DDX55-204ENST00000536079 HMSDA8MTL9 139 aa12.98□□□□□ -0.33
DDX55-204ENST00000536079 M0R3E3 92 aa12.98□□□□□ -0.33
DDX55-204ENST00000536079 NBEAP1P0C6P0 100 aa12.98□□□□□ -0.33
DDX55-204ENST00000536079 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
DDX55-204ENST00000536079 SSX7Q7RTT5 188 aa12.98□□□□□ -0.33
DDX55-204ENST00000536079 PHYHIPLQ96FC7 376 aa12.98□□□□□ -0.33
DDX55-204ENST00000536079 RARRES2Q99969 163 aa12.98□□□□□ -0.33
DDX55-204ENST00000536079 X6R8D5 127 aa12.98□□□□□ -0.33
DDX55-204ENST00000536079 BORCS7-ASMTA0A0B4J1R7 106 aa12.97□□□□□ -0.33
DDX55-204ENST00000536079 DEFB4AO15263 64 aa12.97□□□□□ -0.33
DDX55-204ENST00000536079 OR7C2O60412 319 aa12.97□□□□□ -0.33
DDX55-204ENST00000536079 ZNF253O75346 499 aa12.97□□□□□ -0.33
DDX55-204ENST00000536079 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
DDX55-204ENST00000536079 STARD9Q9P2P6 4700 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms