RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 SMCO3A2RU48 225 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 MRPS12O15235 138 aaKnown RBP7.71□□□□□ -1.18
CCDC60-202ENST00000535685 IGKV3-20P01619 116 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 CXCL2P19875 107 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 B2MP61769 119 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 ARL16Q0P5N6 197 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 IL15RAQ13261 267 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 PATE2Q6UY27 113 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 ZNF546Q86UE3 836 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 ZNF431Q8TF32 576 aaPredicted RBP7.71□□□□□ -1.18
CCDC60-202ENST00000535685 GSKIPQ9P0R6 139 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 DKK2Q9UBU2 259 aa7.71□□□□□ -1.18
CCDC60-202ENST00000535685 HBE1P02100 147 aa7.7□□□□□ -1.18
CCDC60-202ENST00000535685 OR5G3P0C626 314 aa7.7□□□□□ -1.18
CCDC60-202ENST00000535685 CXCL3P19876 107 aa7.7□□□□□ -1.18
CCDC60-202ENST00000535685 FXYD7P58549 80 aa7.7□□□□□ -1.18
CCDC60-202ENST00000535685 RRAS2P62070 204 aaPredicted RBP7.7□□□□□ -1.18
CCDC60-202ENST00000535685 ZNF846Q147U1 533 aa7.7□□□□□ -1.18
CCDC60-202ENST00000535685 OR11H7Q8NGC8 314 aa7.7□□□□□ -1.18
CCDC60-202ENST00000535685 SVIPQ8NHG7 77 aa7.7□□□□□ -1.18
CCDC60-202ENST00000535685 C2orf50Q96LR7 162 aa7.7□□□□□ -1.18
CCDC60-202ENST00000535685 ARV1Q9H2C2 271 aa7.7□□□□□ -1.18
CCDC60-202ENST00000535685 GOSR2O14653 212 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 AGPAT2O15120 278 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 CRXO43186 299 aaPredicted RBP7.69□□□□□ -1.18
CCDC60-202ENST00000535685 TSPOP30536 169 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 CNN1P51911 297 aaKnown RBP7.69□□□□□ -1.18
CCDC60-202ENST00000535685 SLC38A11Q08AI6 406 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 PSG3Q16557 428 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 RRN3P1Q2M238 152 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 VWC2Q2TAL6 325 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 C12orf45Q8N5I9 185 aaPredicted RBP7.69□□□□□ -1.18
CCDC60-202ENST00000535685 UHRF2Q96PU4 802 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 NIPSNAP3BQ9BS92 247 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 NDUFAF3Q9BU61 184 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 ARL6Q9H0F7 186 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 NUDT15Q9NV35 164 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.69□□□□□ -1.18
CCDC60-202ENST00000535685 NACAE9PAV3 2078 aa7.69□□□□□ -1.18
CCDC60-202ENST00000535685 TRAV6A0A075B6T7 132 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 LOC102723971A0A1B0GUV8 181 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 L7N2F9 121 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 P0DMU3 169 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 FAM231AP0DMU4 169 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 FAM231CP0DMU5 169 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 VAMP2P63027 116 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 FAM222AQ5U5X8 452 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 LCN15Q6UWW0 184 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 GSG1LQ6UXU4 331 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 OR8A1Q8NGG7 326 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 S100ZQ8WXG8 99 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 MGST2Q99735 147 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 SEC22CQ9BRL7 303 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 SLC50A1Q9BRV3 221 aa7.68□□□□□ -1.18
CCDC60-202ENST00000535685 IGHV3OR16-12A0A075B7B8 117 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 FAM240BA0A1B0GVZ2 78 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 C5orf51A6NDU8 294 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 BOLA2-SMG1P6H3BVE0 249 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 CCSO14618 274 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 INSP01308 110 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 PLA2G1BP04054 148 aaKnown RBP7.67□□□□□ -1.18
CCDC60-202ENST00000535685 PVALBP20472 110 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-202ENST00000535685 FGL1Q08830 312 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 ASAH1Q13510 395 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 RAB31Q13636 194 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 MZT2BQ6NZ67 158 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 ZNF767PQ75MW2 155 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 LINC00305Q7Z4B0 112 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 BPIFA4PQ86YQ2 179 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 TMEM256Q8N2U0 113 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 RNF182Q8N6D2 247 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 POM121L12Q8N7R1 296 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 ZNF738Q8NE65 137 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 TMEM37Q8WXS4 190 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 ZNF331Q9NQX6 463 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-202ENST00000535685 LYRM2Q9NU23 88 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-202ENST00000535685 WDR83OSQ9Y284 106 aa7.67□□□□□ -1.18
CCDC60-202ENST00000535685 YTHDF2Q9Y5A9 579 aaKnown RBP7.67□□□□□ -1.18
CCDC60-202ENST00000535685 LYRM9A8MSI8 78 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 M0R2Z0 102 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 S100A11P31949 105 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 RPL29P47914 159 aaKnown RBP7.66□□□□□ -1.18
CCDC60-202ENST00000535685 CAMLGP49069 296 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 SULT1A1P50225 295 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 EMP1P54849 157 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 ATP6V1FQ16864 119 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 SPINK13Q1W4C9 94 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 IGFL4Q6B9Z1 124 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 C20orf144Q9BQM9 153 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 DNAJC4Q9NNZ3 241 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 UQCC1Q9NVA1 299 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 LSM5Q9Y4Y9 91 aaKnown RBP7.66□□□□□ -1.18
CCDC60-202ENST00000535685 DNAH17Q9UFH2 4485 aa7.66□□□□□ -1.18
CCDC60-202ENST00000535685 FAM24AA6NFZ4 105 aa7.65□□□□□ -1.18
CCDC60-202ENST00000535685 FAM25EA8MYX2 175 aa7.65□□□□□ -1.18
CCDC60-202ENST00000535685 COX7A2P2O60397 106 aa7.65□□□□□ -1.18
CCDC60-202ENST00000535685 ZNF253O75346 499 aa7.65□□□□□ -1.18
CCDC60-202ENST00000535685 IGLC2P0DOY2 106 aa7.65□□□□□ -1.18
CCDC60-202ENST00000535685 BCAP31P51572 246 aa7.65□□□□□ -1.18
CCDC60-202ENST00000535685 CAV2P51636 162 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms