RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 PPP1R14DQ9NXH3 145 aa11.53□□□□□ -0.56
CLSTN3-204ENST00000535313 PLA2G2EQ9NZK7 142 aa11.53□□□□□ -0.56
CLSTN3-204ENST00000535313 A0A087X0K7 114 aa11.52□□□□□ -0.57
CLSTN3-204ENST00000535313 L7N2F9 121 aa11.52□□□□□ -0.57
CLSTN3-204ENST00000535313 MBPP02686 304 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-204ENST00000535313 B2MP61769 119 aa11.52□□□□□ -0.57
CLSTN3-204ENST00000535313 DAD1P61803 113 aa11.52□□□□□ -0.57
CLSTN3-204ENST00000535313 VAMP2P63027 116 aa11.52□□□□□ -0.57
CLSTN3-204ENST00000535313 ENKURQ8TC29 256 aa11.52□□□□□ -0.57
CLSTN3-204ENST00000535313 GGACTQ9BVM4 153 aa11.52□□□□□ -0.57
CLSTN3-204ENST00000535313 C7orf66A4D0T2 115 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 ZNF705GA8MUZ8 300 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 FAM25EA8MYX2 175 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 BOLA2-SMG1P6H3BVE0 249 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 CXCL3P19876 107 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 RHOBP62745 196 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 HIST1H1AQ02539 215 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 PSG3Q16557 428 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 LINC00336Q6ZUF6 198 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 UBE2DNLQ8IWF7 75 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 OR8A1Q8NGG7 326 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 MARVELD1Q9BSK0 173 aa11.51□□□□□ -0.57
CLSTN3-204ENST00000535313 CCSO14618 274 aa11.5□□□□□ -0.57
CLSTN3-204ENST00000535313 AGPAT2O15120 278 aa11.5□□□□□ -0.57
CLSTN3-204ENST00000535313 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-204ENST00000535313 BCAP31P51572 246 aa11.5□□□□□ -0.57
CLSTN3-204ENST00000535313 ARL16Q0P5N6 197 aa11.5□□□□□ -0.57
CLSTN3-204ENST00000535313 PATE2Q6UY27 113 aa11.5□□□□□ -0.57
CLSTN3-204ENST00000535313 LINC00305Q7Z4B0 112 aa11.5□□□□□ -0.57
CLSTN3-204ENST00000535313 BAP18Q8IXM2 172 aa11.5□□□□□ -0.57
CLSTN3-204ENST00000535313 TRAV12-2A0A075B6T6 113 aa11.49□□□□□ -0.57
CLSTN3-204ENST00000535313 C5orf51A6NDU8 294 aa11.49□□□□□ -0.57
CLSTN3-204ENST00000535313 COX7A2P2O60397 106 aa11.49□□□□□ -0.57
CLSTN3-204ENST00000535313 CXCL2P19875 107 aa11.49□□□□□ -0.57
CLSTN3-204ENST00000535313 RAB31Q13636 194 aa11.49□□□□□ -0.57
CLSTN3-204ENST00000535313 RPUSD4Q96CM3 377 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-204ENST00000535313 LSM5Q9Y4Y9 91 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-204ENST00000535313 LYRM9A8MSI8 78 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 M0R2N4 97 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 PRM2P04554 102 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 TSPOP30536 169 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 CAV2P51636 162 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 DEFA1P59665 94 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 DEFA3P59666 94 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 TMEM88Q6PEY1 159 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 LCN15Q6UWW0 184 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 BPIFA4PQ86YQ2 179 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 TMEM256Q8N2U0 113 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 ZNF431Q8TF32 576 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 LINC01587Q99440 93 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 DNAH2Q9P225 4427 aa11.48□□□□□ -0.57
CLSTN3-204ENST00000535313 INMT-MINDY4F8WBC2 141 aa11.47□□□□□ -0.57
CLSTN3-204ENST00000535313 MRPS12O15235 138 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-204ENST00000535313 PTTG1O95997 202 aa11.47□□□□□ -0.57
CLSTN3-204ENST00000535313 C10orf113Q5VZT2 155 aa11.47□□□□□ -0.57
CLSTN3-204ENST00000535313 Q6ZRG5 221 aa11.47□□□□□ -0.57
CLSTN3-204ENST00000535313 MGST2Q99735 147 aa11.47□□□□□ -0.57
CLSTN3-204ENST00000535313 SLC50A1Q9BRV3 221 aa11.47□□□□□ -0.57
CLSTN3-204ENST00000535313 DEFB130BP0DP73 79 aa11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 DEFB130AP0DP74 79 aa11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 PVALBP20472 110 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 CAMLGP49069 296 aa11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 LGALS9BQ3B8N2 356 aa11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 RNF212Q495C1 297 aa11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 C12orf45Q8N5I9 185 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 TMEM37Q8WXS4 190 aa11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 C2orf50Q96LR7 162 aa11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 ZNF331Q9NQX6 463 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-204ENST00000535313 FAT2Q9NYQ8 4349 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 DNAH17Q9UFH2 4485 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 CST7O76096 145 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 SNRPCP09234 159 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 HTN1P15515 57 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 CDKN1BP46527 198 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 TAS2R60P59551 318 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 C15orf53Q8NAA6 179 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 DNAJC4Q9NNZ3 241 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 UQCC1Q9NVA1 299 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 HERC2O95714 4834 aa11.45□□□□□ -0.58
CLSTN3-204ENST00000535313 IGLV2-18A0A075B6J9 118 aa11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 FAM24AA6NFZ4 105 aa11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 PRB4P10163 310 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 AZU1P20160 251 aa11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 S100A10P60903 97 aa11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 OPCMLQ14982 345 aa11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 OR1L4Q8NGR5 311 aa11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 OR10J6PQ8NGY7 276 aa11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 C16orf74Q96GX8 76 aa11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 PXMP4Q9Y6I8 212 aa11.44□□□□□ -0.58
CLSTN3-204ENST00000535313 PRSS29PA6NIE9 313 aa11.43□□□□□ -0.58
CLSTN3-204ENST00000535313 H3BTX0 84 aa11.43□□□□□ -0.58
CLSTN3-204ENST00000535313 MORN5Q5VZ52 161 aa11.43□□□□□ -0.58
CLSTN3-204ENST00000535313 MIC13Q5XKP0 118 aa11.43□□□□□ -0.58
CLSTN3-204ENST00000535313 STX12Q86Y82 276 aa11.43□□□□□ -0.58
CLSTN3-204ENST00000535313 PFDN5Q99471 154 aa11.43□□□□□ -0.58
CLSTN3-204ENST00000535313 WDR83OSQ9Y284 106 aa11.43□□□□□ -0.58
CLSTN3-204ENST00000535313 PLAC8L1A1L4L8 177 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 F5H768 121 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 H7BYZ3 331 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 SLC17A3O00476 420 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms