RNA–Protein interactions for RNA: ENST00000535140.1

OTUB1-205, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-205ENST00000535140 ID3Q02535 119 aa12.89□□□□□ -0.35
OTUB1-205ENST00000535140 MAPKAPK5-AS1Q8N8E1 139 aa12.89□□□□□ -0.35
OTUB1-205ENST00000535140 RPUSD4Q96CM3 377 aaKnown RBP12.89□□□□□ -0.35
OTUB1-205ENST00000535140 ARL6Q9H0F7 186 aa12.89□□□□□ -0.35
OTUB1-205ENST00000535140 NOP10Q9NPE3 64 aaKnown RBP12.89□□□□□ -0.35
OTUB1-205ENST00000535140 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
OTUB1-205ENST00000535140 PMS2P5A8MQ11 134 aa12.88□□□□□ -0.35
OTUB1-205ENST00000535140 CDK2AP2O75956 126 aa12.88□□□□□ -0.35
OTUB1-205ENST00000535140 SNRPCP09234 159 aaKnown RBP12.88□□□□□ -0.35
OTUB1-205ENST00000535140 PLP1P60201 277 aa12.88□□□□□ -0.35
OTUB1-205ENST00000535140 SELENOTP62341 195 aa12.88□□□□□ -0.35
OTUB1-205ENST00000535140 SSX7Q7RTT5 188 aa12.88□□□□□ -0.35
OTUB1-205ENST00000535140 HSPG2P98160 4391 aa12.88□□□□□ -0.35
OTUB1-205ENST00000535140 ANXA7P20073 488 aaKnown RBP12.87□□□□□ -0.35
OTUB1-205ENST00000535140 CDKN1BP46527 198 aa12.87□□□□□ -0.35
OTUB1-205ENST00000535140 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
OTUB1-205ENST00000535140 KIR3DS1Q14943 382 aa12.87□□□□□ -0.35
OTUB1-205ENST00000535140 PATE2Q6UY27 113 aa12.87□□□□□ -0.35
OTUB1-205ENST00000535140 RNASE8Q8TDE3 154 aaKnown RBP12.87□□□□□ -0.35
OTUB1-205ENST00000535140 PARD6GQ9BYG4 376 aaPredicted RBP12.87□□□□□ -0.35
OTUB1-205ENST00000535140 ARV1Q9H2C2 271 aa12.87□□□□□ -0.35
OTUB1-205ENST00000535140 C9orf170A2RU37 121 aa12.86□□□□□ -0.35
OTUB1-205ENST00000535140 METTL15P1P0C7V9 234 aa12.86□□□□□ -0.35
OTUB1-205ENST00000535140 DLK1P80370 383 aa12.86□□□□□ -0.35
OTUB1-205ENST00000535140 OR5I1Q13606 314 aa12.86□□□□□ -0.35
OTUB1-205ENST00000535140 TMEM263Q8WUH6 116 aaKnown RBP12.86□□□□□ -0.35
OTUB1-205ENST00000535140 MRPS12O15235 138 aaKnown RBP12.85□□□□□ -0.35
OTUB1-205ENST00000535140 SCGB1D2O95969 90 aa12.85□□□□□ -0.35
OTUB1-205ENST00000535140 UBE2MP61081 183 aaKnown RBP12.85□□□□□ -0.35
OTUB1-205ENST00000535140 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
OTUB1-205ENST00000535140 DEDD2Q8WXF8 326 aa12.85□□□□□ -0.35
OTUB1-205ENST00000535140 SMIM8Q96KF7 97 aa12.85□□□□□ -0.35
OTUB1-205ENST00000535140 KRTAP1-5Q9BYS1 174 aa12.85□□□□□ -0.35
OTUB1-205ENST00000535140 MGAT4CQ9UBM8 478 aa12.85□□□□□ -0.35
OTUB1-205ENST00000535140 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 A0A0J9YY99 117 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 H3BTX0 84 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 H7BYZ3 331 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 S100A5P33763 92 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 TEPPQ6URK8 271 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 LCN15Q6UWW0 184 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 TMEM14EPQ6UXP3 125 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 SPATA12Q7Z6I5 190 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 S100A7AQ86SG5 101 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 GNPNAT1Q96EK6 184 aaPredicted RBP12.84□□□□□ -0.35
OTUB1-205ENST00000535140 Q9H8V8 135 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 NPVFQ9HCQ7 196 aa12.84□□□□□ -0.35
OTUB1-205ENST00000535140 ZNF331Q9NQX6 463 aaPredicted RBP12.84□□□□□ -0.35
OTUB1-205ENST00000535140 PRAC2D3DTV9 90 aa12.83□□□□□ -0.36
OTUB1-205ENST00000535140 CXCL2P19875 107 aa12.83□□□□□ -0.36
OTUB1-205ENST00000535140 LINC00305Q7Z4B0 112 aa12.83□□□□□ -0.36
OTUB1-205ENST00000535140 CCDC190Q86UF4 302 aa12.83□□□□□ -0.36
OTUB1-205ENST00000535140 OR10P1Q8NGE3 313 aa12.83□□□□□ -0.36
OTUB1-205ENST00000535140 OR10J6PQ8NGY7 276 aa12.83□□□□□ -0.36
OTUB1-205ENST00000535140 SLC50A1Q9BRV3 221 aa12.83□□□□□ -0.36
OTUB1-205ENST00000535140 FLVCR2Q9UPI3 526 aa12.83□□□□□ -0.36
OTUB1-205ENST00000535140 GAGE12BA1L429 117 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 J3KRW8 73 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 K7EPK0 472 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 SLC17A3O00476 420 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 GOSR2O14653 212 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 GAGE7O76087 117 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 GAGE12FP0CL80 117 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 GAGE12GP0CL81 117 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 GAGE12IP0CL82 117 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 GFI1BQ5VTD9 330 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 ZNF546Q86UE3 836 aa12.82□□□□□ -0.36
OTUB1-205ENST00000535140 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 ZNF701M0R085 212 aaPredicted RBP12.81□□□□□ -0.36
OTUB1-205ENST00000535140 NDUFB6O95139 128 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 OR4E1P0C645 316 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 M6PRP20645 277 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 HOXA5P20719 270 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 IAH1Q2TAA2 248 aaPredicted RBP12.81□□□□□ -0.36
OTUB1-205ENST00000535140 TTC32Q5I0X7 151 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 MORN5Q5VZ52 161 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 CCDC28AQ8IWP9 274 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 LINC00612Q8N6U2 182 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 RXFP4Q8TDU9 374 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 C20orf144Q9BQM9 153 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 RNF24Q9Y225 148 aa12.81□□□□□ -0.36
OTUB1-205ENST00000535140 AGPAT2O15120 278 aa12.8□□□□□ -0.36
OTUB1-205ENST00000535140 COX7A2P2O60397 106 aa12.8□□□□□ -0.36
OTUB1-205ENST00000535140 RLN2P04090 185 aa12.8□□□□□ -0.36
OTUB1-205ENST00000535140 INPP1P49441 399 aa12.8□□□□□ -0.36
OTUB1-205ENST00000535140 ARL16Q0P5N6 197 aa12.8□□□□□ -0.36
OTUB1-205ENST00000535140 PXDC1Q5TGL8 231 aa12.8□□□□□ -0.36
OTUB1-205ENST00000535140 BPIFA4PQ86YQ2 179 aa12.8□□□□□ -0.36
OTUB1-205ENST00000535140 GSKIPQ9P0R6 139 aa12.8□□□□□ -0.36
OTUB1-205ENST00000535140 RCL1Q9Y2P8 373 aaKnown RBP12.8□□□□□ -0.36
OTUB1-205ENST00000535140 LINC00854A0A1B0GVQ3 168 aa12.79□□□□□ -0.36
OTUB1-205ENST00000535140 CCDC160A6NGH7 325 aa12.79□□□□□ -0.36
OTUB1-205ENST00000535140 SNURFLB1AK76 121 aa12.79□□□□□ -0.36
OTUB1-205ENST00000535140 TSC22D2O75157 780 aa12.79□□□□□ -0.36
OTUB1-205ENST00000535140 C4orf46Q504U0 113 aa12.79□□□□□ -0.36
OTUB1-205ENST00000535140 SRRQ9GZT4 340 aa12.79□□□□□ -0.36
OTUB1-205ENST00000535140 Q9H3A6 140 aa12.79□□□□□ -0.36
OTUB1-205ENST00000535140 LRP1BQ9NZR2 4599 aa12.79□□□□□ -0.36
OTUB1-205ENST00000535140 OPCMLQ14982 345 aa12.78□□□□□ -0.36
OTUB1-205ENST00000535140 ESRGQ1W209 222 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms