RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 LINC00052Q96N35 136 aa3.67□□□□□ -1.82
ATM-224ENST00000534625 TRGV9Q99603 122 aa3.67□□□□□ -1.82
ATM-224ENST00000534625 PBDC1Q9BVG4 233 aa3.67□□□□□ -1.82
ATM-224ENST00000534625 SAV1Q9H4B6 383 aaPredicted RBP3.67□□□□□ -1.82
ATM-224ENST00000534625 KIAA1109Q2LD37 5005 aa3.67□□□□□ -1.82
ATM-224ENST00000534625 NACAE9PAV3 2078 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 IGHV3OR16-12A0A075B7B8 117 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 A0A0J9YX75 114 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 A0A1B0GVY2 172 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 DUXBA0A1W2PPF3 345 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 TMEM189A5PLL7 270 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 SMIM9A6NGZ8 99 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 PRSS46E5RG02 174 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 F6UB75 175 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 ISLRO14498 428 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 RTL8CO15255 209 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 FABP1P07148 127 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 SPART-AS1P0CW21 52 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 ID1P41134 155 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 AMTP48728 403 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 PSMB3P49720 205 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 EMP1P54849 157 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 PAX9P55771 341 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 RAB11AP62491 216 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 PSG9Q00887 426 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 TMEM128Q5BJH2 165 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 FAM78BQ5VT40 261 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 SPATA31B1PQ5VZV4 182 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 TMEM182Q6ZP80 229 aaPredicted RBP3.66□□□□□ -1.82
ATM-224ENST00000534625 TMED4Q7Z7H5 227 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 OR8I2Q8N0Y5 310 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 C1orf158Q8N1D5 194 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 LRTM2Q8N967 370 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 OR4B1Q8NGF8 309 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 MCFD2Q8NI22 146 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 TMED6Q8WW62 240 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 SLC35E1Q96K37 410 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 NDUFAF3Q9BU61 184 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 SLC35B3Q9H1N7 401 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 RFNGQ9Y644 331 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 V9GYH0 126 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 PKD1P98161 4303 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 DNAH11Q96DT5 4516 aa3.66□□□□□ -1.82
ATM-224ENST00000534625 DYNC1H1Q14204 4646 aaKnown RBP3.65□□□□□ -1.82
ATM-224ENST00000534625 PIGBOS1A0A0B4J2F0 54 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 ZNF98A6NK75 572 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 A8MTW9 85 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 WRBO00258 174 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 SYNGR2O43760 224 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 MED6O75586 246 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 SFT2D2O95562 160 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 P0DMU3 169 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 FAM231AP0DMU4 169 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 FAM231CP0DMU5 169 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 GATA2P23769 480 aaPredicted RBP3.65□□□□□ -1.83
ATM-224ENST00000534625 FAUP35544 74 aaKnown RBP3.65□□□□□ -1.83
ATM-224ENST00000534625 AP3S2P59780 193 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 PPP1R1AQ13522 171 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 OXA1LQ15070 435 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 PYDC2Q56P42 97 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 FAM222AQ5U5X8 452 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 GGNBP1Q5YKI7 109 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 EBLN2Q6P2I7 272 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 AMTNQ6UX39 209 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 LINC00336Q6ZUF6 198 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 TOMM5Q8N4H5 51 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 COQ8AQ8NI60 647 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 PPP1R14BQ96C90 147 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 CIB3Q96Q77 187 aaPredicted RBP3.65□□□□□ -1.83
ATM-224ENST00000534625 SLC25A21Q9BQT8 299 aaPredicted RBP3.65□□□□□ -1.83
ATM-224ENST00000534625 NIPSNAP3BQ9BS92 247 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 RSG1Q9BU20 258 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 MAGT1Q9H0U3 335 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 PAIP2BQ9ULR5 123 aaKnown RBP3.65□□□□□ -1.83
ATM-224ENST00000534625 TMED3Q9Y3Q3 217 aa3.65□□□□□ -1.83
ATM-224ENST00000534625 IGLV5-52A0A0A0MRZ9 124 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 TRAV8-2A0A0B4J237 113 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 M0R2N4 97 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 CRXO43186 299 aaPredicted RBP3.64□□□□□ -1.83
ATM-224ENST00000534625 CFDP00746 253 aaPredicted RBP3.64□□□□□ -1.83
ATM-224ENST00000534625 HBE1P02100 147 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 PRM2P04554 102 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 HOXB5P09067 269 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 ORM2P19652 201 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 GALR1P47211 349 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 PCP4P48539 62 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 MEOX2P50222 304 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 RPP30P78346 268 aaKnown RBP3.64□□□□□ -1.83
ATM-224ENST00000534625 LGALS9BQ3B8N2 356 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 SPANXN5Q5MJ07 72 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 SAMD13Q5VXD3 122 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 Q6ZR54 194 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 TMEM144Q7Z5S9 345 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 CCDC190Q86UF4 302 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 BPIFCQ8NFQ6 507 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 OR4D5Q8NGN0 318 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 OR1B1Q8NGR6 318 aa3.64□□□□□ -1.83
ATM-224ENST00000534625 DEDD2Q8WXF8 326 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms