RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 LRRC37A5PQ49AS3 106 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 Q6ZQT7 251 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 Q6ZTC4 211 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 LINC00305Q7Z4B0 112 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 OR11H7Q8NGC8 314 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 OR4B1Q8NGF8 309 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 PPP1R1CQ8WVI7 109 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 ZNF503Q96F45 646 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 FAM167A-AS1Q96KT0 104 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 C16orf92Q96LL3 132 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 TMEM147Q9BVK8 224 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 GGACTQ9BVM4 153 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 NMES1Q9C002 83 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 ZNF331Q9NQX6 463 aaPredicted RBP3.62□□□□□ -1.83
USH1C-210ENST00000534556 ZNF586Q9NXT0 402 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 MGAT4CQ9UBM8 478 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 FBXL17Q9UF56 701 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 ALG5Q9Y673 324 aa3.62□□□□□ -1.83
USH1C-210ENST00000534556 DYNC1H1Q14204 4646 aaKnown RBP3.62□□□□□ -1.83
USH1C-210ENST00000534556 TRAV12-2A0A075B6T6 113 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 PLAC8L1A1L4L8 177 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 G3V3Q6 166 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 M0R3E3 92 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 PRAF2O60831 178 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 MPC2O95563 127 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 FABP1P07148 127 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 PYYP10082 97 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 MIFP14174 115 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 FGF7P21781 194 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 GALR1P47211 349 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 RPL29P47914 159 aaKnown RBP3.61□□□□□ -1.83
USH1C-210ENST00000534556 RAP2BP61225 183 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 SNRPD3P62318 126 aaKnown RBP3.61□□□□□ -1.83
USH1C-210ENST00000534556 PSG9Q00887 426 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 FCN2Q15485 313 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 PSG3Q16557 428 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 SPINK13Q1W4C9 94 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 MIR17HGQ75NE6 70 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 ZNF546Q86UE3 836 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 BAP18Q8IXM2 172 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 RPP25LQ8N5L8 163 aaKnown RBP3.61□□□□□ -1.83
USH1C-210ENST00000534556 OR8A1Q8NGG7 326 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 OR5C1Q8NGR4 320 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 C11orf45Q8TAV5 145 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 THAP6Q8TBB0 222 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 CHAC2Q8WUX2 184 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 MFFQ9GZY8 342 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 GPN1Q9HCN4 374 aaPredicted RBP3.61□□□□□ -1.83
USH1C-210ENST00000534556 DNAJC4Q9NNZ3 241 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 RPRMQ9NS64 109 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 SLC39A9Q9NUM3 307 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 UQCC1Q9NVA1 299 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 APLNQ9ULZ1 77 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 PXMP4Q9Y6I8 212 aa3.61□□□□□ -1.83
USH1C-210ENST00000534556 IGHV3OR16-12A0A075B7B8 117 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 ZNF705GA8MUZ8 300 aaPredicted RBP3.6□□□□□ -1.83
USH1C-210ENST00000534556 E5RGE8 158 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 COX7A2P2O60397 106 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 CT45A10P0DMU9 189 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 RPL7P18124 248 aaKnown RBP3.6□□□□□ -1.83
USH1C-210ENST00000534556 S100A11P31949 105 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 NUP62P37198 522 aaPredicted RBP3.6□□□□□ -1.83
USH1C-210ENST00000534556 ID1P41134 155 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 MEOX2P50222 304 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 B2MP61769 119 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 BAXQ07812 192 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 ERCC8Q13216 396 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 CLINT1Q14677 625 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 C10orf113Q5VZT2 155 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 ZNF738Q8NE65 137 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 RPUSD4Q96CM3 377 aaKnown RBP3.6□□□□□ -1.83
USH1C-210ENST00000534556 IGF2BP2-AS1Q96M15 143 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 GPR82Q96P67 336 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 NEU1Q99519 415 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 SLC25A2Q9BXI2 301 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 NPCDR1Q9BY65 106 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 SMIM3Q9BZL3 60 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 WDR61Q9GZS3 305 aaKnown RBP3.6□□□□□ -1.83
USH1C-210ENST00000534556 HRH4Q9H3N8 390 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 MBD2Q9UBB5 411 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 HSPB11Q9Y547 144 aa3.6□□□□□ -1.83
USH1C-210ENST00000534556 TRBV19A0A075B6N1 114 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 NUPR2A6NF83 97 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 SSNA1O43805 119 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 LY6G6CO95867 125 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 PVALBP20472 110 aaPredicted RBP3.59□□□□□ -1.83
USH1C-210ENST00000534556 RPL12P30050 165 aaKnown RBP3.59□□□□□ -1.83
USH1C-210ENST00000534556 EMP1P54849 157 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 HIST1H1AQ02539 215 aaPredicted RBP3.59□□□□□ -1.83
USH1C-210ENST00000534556 ATP6V1FQ16864 119 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 TMEM41BQ5BJD5 291 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 PRR9Q5T870 116 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 PXDC1Q5TGL8 231 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 FAM222AQ5U5X8 452 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 EBLN2Q6P2I7 272 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 LCN15Q6UWW0 184 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 BPIFA4PQ86YQ2 179 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 EXOC3-AS1Q8N2X6 119 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 FXYD5Q96DB9 178 aa3.59□□□□□ -1.83
USH1C-210ENST00000534556 PHYHIPLQ96FC7 376 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms