RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 TRAV5A0A0B4J249 113 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 NUPR2A6NF83 97 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 MPDU1O75352 247 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 JTBO76095 146 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 MIFP14174 115 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 ZNF709Q8N972 641 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 Q8NAQ8 132 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 CSNK1G2-AS1Q8NCQ2 148 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 SMIM3Q9BZL3 60 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 MED28Q9H204 178 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 MBD2Q9UBB5 411 aa11.54□□□□□ -0.56
PAX6-230ENST00000534390 HIST1H1AQ02539 215 aaPredicted RBP11.53□□□□□ -0.56
PAX6-230ENST00000534390 LCN15Q6UWW0 184 aa11.53□□□□□ -0.56
PAX6-230ENST00000534390 RNF126Q9BV68 326 aa11.53□□□□□ -0.56
PAX6-230ENST00000534390 PPP1R14DQ9NXH3 145 aa11.53□□□□□ -0.56
PAX6-230ENST00000534390 X6R8D5 127 aa11.53□□□□□ -0.56
PAX6-230ENST00000534390 CSMD3Q7Z407 3707 aa11.52□□□□□ -0.56
PAX6-230ENST00000534390 LCE6AA0A183 80 aa11.52□□□□□ -0.57
PAX6-230ENST00000534390 ZNF705EA8MWA4 302 aaPredicted RBP11.52□□□□□ -0.57
PAX6-230ENST00000534390 MRPS12O15235 138 aaKnown RBP11.52□□□□□ -0.57
PAX6-230ENST00000534390 DUSP14O95147 198 aaKnown RBP11.52□□□□□ -0.57
PAX6-230ENST00000534390 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.57
PAX6-230ENST00000534390 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.57
PAX6-230ENST00000534390 CXCL3P19876 107 aa11.52□□□□□ -0.57
PAX6-230ENST00000534390 RPL12P30050 165 aaKnown RBP11.52□□□□□ -0.57
PAX6-230ENST00000534390 CNN1P51911 297 aaKnown RBP11.52□□□□□ -0.57
PAX6-230ENST00000534390 RHOBP62745 196 aa11.52□□□□□ -0.57
PAX6-230ENST00000534390 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
PAX6-230ENST00000534390 PHLDA1Q8WV24 401 aaPredicted RBP11.52□□□□□ -0.57
PAX6-230ENST00000534390 ATP5SQ99766 215 aa11.52□□□□□ -0.57
PAX6-230ENST00000534390 HSPB11Q9Y547 144 aa11.52□□□□□ -0.57
PAX6-230ENST00000534390 CXCL2P19875 107 aa11.51□□□□□ -0.57
PAX6-230ENST00000534390 EMP1P54849 157 aa11.51□□□□□ -0.57
PAX6-230ENST00000534390 FCN2Q15485 313 aa11.51□□□□□ -0.57
PAX6-230ENST00000534390 PSG3Q16557 428 aa11.51□□□□□ -0.57
PAX6-230ENST00000534390 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
PAX6-230ENST00000534390 CEMP1Q6PRD7 247 aaPredicted RBP11.51□□□□□ -0.57
PAX6-230ENST00000534390 RPUSD4Q96CM3 377 aaKnown RBP11.51□□□□□ -0.57
PAX6-230ENST00000534390 SLC50A1Q9BRV3 221 aa11.51□□□□□ -0.57
PAX6-230ENST00000534390 TMEM208Q9BTX3 173 aa11.51□□□□□ -0.57
PAX6-230ENST00000534390 KCNIP2Q9NS61 270 aa11.51□□□□□ -0.57
PAX6-230ENST00000534390 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
PAX6-230ENST00000534390 GOLT1BQ9Y3E0 138 aa11.51□□□□□ -0.57
PAX6-230ENST00000534390 TENM2Q9NT68 2774 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 C17orf112F2Z3M2 114 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 M0R2Z0 102 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 SLC17A3O00476 420 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 IFNA5P01569 189 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 SPINK13Q1W4C9 94 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 OR8A1Q8NGG7 326 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 SCGB1C1Q8TD33 95 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 CHAC2Q8WUX2 184 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 CLUHP3Q96NS8 147 aa11.5□□□□□ -0.57
PAX6-230ENST00000534390 WDR61Q9GZS3 305 aaKnown RBP11.5□□□□□ -0.57
PAX6-230ENST00000534390 ZNF331Q9NQX6 463 aaPredicted RBP11.5□□□□□ -0.57
PAX6-230ENST00000534390 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
PAX6-230ENST00000534390 H3BQ15 152 aa11.49□□□□□ -0.57
PAX6-230ENST00000534390 IGLC2P0DOY2 106 aa11.49□□□□□ -0.57
PAX6-230ENST00000534390 RGS21Q2M5E4 152 aa11.49□□□□□ -0.57
PAX6-230ENST00000534390 OR11H7Q8NGC8 314 aa11.49□□□□□ -0.57
PAX6-230ENST00000534390 HRH4Q9H3N8 390 aa11.49□□□□□ -0.57
PAX6-230ENST00000534390 INSP01308 110 aa11.48□□□□□ -0.57
PAX6-230ENST00000534390 AMTNQ6UX39 209 aa11.48□□□□□ -0.57
PAX6-230ENST00000534390 ZNF705AQ6ZN79 300 aaPredicted RBP11.48□□□□□ -0.57
PAX6-230ENST00000534390 BLNKQ8WV28 456 aa11.48□□□□□ -0.57
PAX6-230ENST00000534390 TRAV12-2A0A075B6T6 113 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 BOLA2-SMG1P6H3BVE0 249 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 HBE1P02100 147 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 PYYP10082 97 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 GUK1Q16774 197 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 FFAR4Q5NUL3 377 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 ZNF767PQ75MW2 155 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 MIR17HGQ75NE6 70 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 BAP18Q8IXM2 172 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 OR10J6PQ8NGY7 276 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 ZNF586Q9NXT0 402 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 CELA1Q9UNI1 258 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 TIMM9Q9Y5J7 89 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 RFNGQ9Y644 331 aa11.47□□□□□ -0.57
PAX6-230ENST00000534390 AMBPP02760 352 aa11.46□□□□□ -0.57
PAX6-230ENST00000534390 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
PAX6-230ENST00000534390 SLC25A2Q9BXI2 301 aa11.46□□□□□ -0.57
PAX6-230ENST00000534390 RYR3Q15413 4870 aa11.45□□□□□ -0.58
PAX6-230ENST00000534390 SMIM9A6NGZ8 99 aa11.45□□□□□ -0.58
PAX6-230ENST00000534390 A8MTW9 85 aa11.45□□□□□ -0.58
PAX6-230ENST00000534390 PRAC2D3DTV9 90 aa11.45□□□□□ -0.58
PAX6-230ENST00000534390 C1orf158Q8N1D5 194 aa11.45□□□□□ -0.58
PAX6-230ENST00000534390 NEU1Q99519 415 aa11.45□□□□□ -0.58
PAX6-230ENST00000534390 TMEM14CQ9P0S9 112 aa11.45□□□□□ -0.58
PAX6-230ENST00000534390 TRBV19A0A075B6N1 114 aa11.44□□□□□ -0.58
PAX6-230ENST00000534390 LOC102723971A0A1B0GUV8 181 aa11.44□□□□□ -0.58
PAX6-230ENST00000534390 TMEM189A5PLL7 270 aa11.44□□□□□ -0.58
PAX6-230ENST00000534390 OR7C2O60412 319 aa11.44□□□□□ -0.58
PAX6-230ENST00000534390 LY6G6CO95867 125 aa11.44□□□□□ -0.58
PAX6-230ENST00000534390 OR10J4P0C629 311 aa11.44□□□□□ -0.58
PAX6-230ENST00000534390 HIST1H1EP10412 219 aaKnown RBP11.44□□□□□ -0.58
PAX6-230ENST00000534390 RRN3P1Q2M238 152 aa11.44□□□□□ -0.58
PAX6-230ENST00000534390 Q6ZTC4 211 aa11.44□□□□□ -0.58
PAX6-230ENST00000534390 C2CD4CQ8TF44 421 aa11.44□□□□□ -0.58
PAX6-230ENST00000534390 SAT2Q96F10 170 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms