RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 RNF141Q8WVD5 230 aa11.8□□□□□ -0.52
CAPRIN1-216ENST00000534042 ARL6Q9H0F7 186 aa11.8□□□□□ -0.52
CAPRIN1-216ENST00000534042 RNF24Q9Y225 148 aa11.8□□□□□ -0.52
CAPRIN1-216ENST00000534042 LINC00588Q9Y4M8 146 aa11.8□□□□□ -0.52
CAPRIN1-216ENST00000534042 C9orf170A2RU37 121 aa11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 PMS2P5A8MQ11 134 aa11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 SSSCA1O60232 199 aa11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 PRB4P10163 310 aaPredicted RBP11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 ANXA7P20073 488 aaKnown RBP11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 CDKN1BP46527 198 aa11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 RRAS2P62070 204 aaPredicted RBP11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 DLK1P80370 383 aa11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 ZNF493Q6ZR52 646 aa11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 RPUSD4Q96CM3 377 aaKnown RBP11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 SMIM8Q96KF7 97 aa11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 NPVFQ9HCQ7 196 aa11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 NOP10Q9NPE3 64 aaKnown RBP11.79□□□□□ -0.52
CAPRIN1-216ENST00000534042 CCNKO75909 580 aa11.78□□□□□ -0.52
CAPRIN1-216ENST00000534042 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
CAPRIN1-216ENST00000534042 S100A5P33763 92 aa11.78□□□□□ -0.52
CAPRIN1-216ENST00000534042 TMEM263Q8WUH6 116 aaKnown RBP11.78□□□□□ -0.52
CAPRIN1-216ENST00000534042 FNDC10F2Z333 226 aa11.77□□□□□ -0.53
CAPRIN1-216ENST00000534042 METTL15P1P0C7V9 234 aa11.77□□□□□ -0.53
CAPRIN1-216ENST00000534042 PATE2Q6UY27 113 aa11.77□□□□□ -0.53
CAPRIN1-216ENST00000534042 SSX7Q7RTT5 188 aa11.77□□□□□ -0.53
CAPRIN1-216ENST00000534042 OR10P1Q8NGE3 313 aa11.77□□□□□ -0.53
CAPRIN1-216ENST00000534042 OR10J6PQ8NGY7 276 aa11.77□□□□□ -0.53
CAPRIN1-216ENST00000534042 RNASE8Q8TDE3 154 aaKnown RBP11.77□□□□□ -0.53
CAPRIN1-216ENST00000534042 ARV1Q9H2C2 271 aa11.77□□□□□ -0.53
CAPRIN1-216ENST00000534042 MGAT4CQ9UBM8 478 aa11.77□□□□□ -0.53
CAPRIN1-216ENST00000534042 H7BYZ3 331 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 K7EPK0 472 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 MRPS12O15235 138 aaKnown RBP11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 CXCL2P19875 107 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 SLC38A11Q08AI6 406 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 OR5I1Q13606 314 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 PXDC1Q5TGL8 231 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 TEPPQ6URK8 271 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 LCN15Q6UWW0 184 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 TMEM14EPQ6UXP3 125 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 C20orf144Q9BQM9 153 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 SLC50A1Q9BRV3 221 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 Q9H8V8 135 aa11.76□□□□□ -0.53
CAPRIN1-216ENST00000534042 GOSR2O14653 212 aa11.75□□□□□ -0.53
CAPRIN1-216ENST00000534042 SCGB1D2O95969 90 aa11.75□□□□□ -0.53
CAPRIN1-216ENST00000534042 CCDC190Q86UF4 302 aa11.75□□□□□ -0.53
CAPRIN1-216ENST00000534042 CCDC28AQ8IWP9 274 aa11.75□□□□□ -0.53
CAPRIN1-216ENST00000534042 MAPKAPK5-AS1Q8N8E1 139 aa11.75□□□□□ -0.53
CAPRIN1-216ENST00000534042 GNPNAT1Q96EK6 184 aaPredicted RBP11.75□□□□□ -0.53
CAPRIN1-216ENST00000534042 ZNF331Q9NQX6 463 aaPredicted RBP11.75□□□□□ -0.53
CAPRIN1-216ENST00000534042 ABCA13Q86UQ4 5058 aa11.74□□□□□ -0.53
CAPRIN1-216ENST00000534042 NDUFB6O95139 128 aa11.74□□□□□ -0.53
CAPRIN1-216ENST00000534042 SNRPCP09234 159 aaKnown RBP11.74□□□□□ -0.53
CAPRIN1-216ENST00000534042 INPP1P49441 399 aa11.74□□□□□ -0.53
CAPRIN1-216ENST00000534042 LINC00305Q7Z4B0 112 aa11.74□□□□□ -0.53
CAPRIN1-216ENST00000534042 ZNF546Q86UE3 836 aa11.74□□□□□ -0.53
CAPRIN1-216ENST00000534042 TRAV26-1A0A087WT03 109 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 NAP1L6A6NFF2 107 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 AGPAT2O15120 278 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 TSC22D2O75157 780 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 OR4E1P0C645 316 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 M6PRP20645 277 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 TAS2R30P59541 319 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 KIR3DS1Q14943 382 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 TTC32Q5I0X7 151 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 BPIFA4PQ86YQ2 179 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 RXFP4Q8TDU9 374 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 PARD6GQ9BYG4 376 aaPredicted RBP11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 FLVCR2Q9UPI3 526 aa11.73□□□□□ -0.53
CAPRIN1-216ENST00000534042 CCDC160A6NGH7 325 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 ZNF701M0R085 212 aaPredicted RBP11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 COX7A2P2O60397 106 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 RLN2P04090 185 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 IAH1Q2TAA2 248 aaPredicted RBP11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 C4orf46Q504U0 113 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 SPANXN2Q5MJ10 180 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 SPATA12Q7Z6I5 190 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 ZNF503Q96F45 646 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 SRRQ9GZT4 340 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 GSKIPQ9P0R6 139 aa11.72□□□□□ -0.53
CAPRIN1-216ENST00000534042 A0A0J9YY99 117 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 GAGE12BA1L429 117 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 SNURFLB1AK76 121 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 H3BTX0 84 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 GAGE7O76087 117 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 GAGE12FP0CL80 117 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 GAGE12GP0CL81 117 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 GAGE12IP0CL82 117 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 GFI1BQ5VTD9 330 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 GGACTQ9BVM4 153 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 PXMP4Q9Y6I8 212 aa11.71□□□□□ -0.53
CAPRIN1-216ENST00000534042 PRAC2D3DTV9 90 aa11.7□□□□□ -0.54
CAPRIN1-216ENST00000534042 J3KRW8 73 aa11.7□□□□□ -0.54
CAPRIN1-216ENST00000534042 SLC17A3O00476 420 aa11.7□□□□□ -0.54
CAPRIN1-216ENST00000534042 ARL16Q0P5N6 197 aa11.7□□□□□ -0.54
CAPRIN1-216ENST00000534042 C10orf113Q5VZT2 155 aa11.7□□□□□ -0.54
CAPRIN1-216ENST00000534042 TRIQKQ629K1 86 aa11.7□□□□□ -0.54
CAPRIN1-216ENST00000534042 ZBTB8BQ8NAP8 495 aaPredicted RBP11.7□□□□□ -0.54
CAPRIN1-216ENST00000534042 TMEM37Q8WXS4 190 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms