RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 RNF2Q99496 336 aa4.43□□□□□ -1.7
CHKA-208ENST00000533910 MRPL32Q9BYC8 188 aaKnown RBP4.43□□□□□ -1.7
CHKA-208ENST00000533910 SLC35B3Q9H1N7 401 aa4.43□□□□□ -1.7
CHKA-208ENST00000533910 MANBALQ9NQG1 85 aa4.43□□□□□ -1.7
CHKA-208ENST00000533910 ZNF580Q9UK33 172 aa4.43□□□□□ -1.7
CHKA-208ENST00000533910 FUT9Q9Y231 359 aa4.43□□□□□ -1.7
CHKA-208ENST00000533910 SOX21Q9Y651 276 aaPredicted RBP4.43□□□□□ -1.7
CHKA-208ENST00000533910 HECTD1Q9ULT8 2610 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 TRBV9A0A0B4J1U6 114 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 MDFIC2A0A1B0GVS7 189 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 ZFP92A6NM28 416 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 F8W036 122 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 EIF3GO75821 320 aaKnown RBP eCLIP4.42□□□□□ -1.7
CHKA-208ENST00000533910 NDUFA7O95182 113 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 CXorf1O96002 111 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 IGKV1-17P01599 117 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 IGHV3-48P01763 117 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 IGF1P05019 195 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 SRP19P09132 144 aaKnown RBP4.42□□□□□ -1.7
CHKA-208ENST00000533910 ARL14EPLP0DKL9 152 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 HIST1H1BP16401 226 aaKnown RBP4.42□□□□□ -1.7
CHKA-208ENST00000533910 MEF2BQ02080 365 aaPredicted RBP4.42□□□□□ -1.7
CHKA-208ENST00000533910 ZNF90Q03938 601 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 KRTAP1-1Q07627 177 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 HAGHQ16775 308 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 COX19Q49B96 90 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 C10orf25Q5T742 122 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 CYB5R2Q6BCY4 276 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 RBMS3Q6XE24 437 aaKnown RBP4.42□□□□□ -1.7
CHKA-208ENST00000533910 SPNS3Q6ZMD2 512 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 ZNF575Q86XF7 245 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 SVBPQ8N300 66 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 OR5R1Q8NH85 324 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 PRSS3P2Q8NHM4 247 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 NANPQ8TBE9 248 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 GATAD1Q8WUU5 269 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 TMEM37Q8WXS4 190 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 URB1-AS1Q96HZ7 61 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 PFDN5Q99471 154 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 RARRES2Q99969 163 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 EIF5A2Q9GZV4 153 aaKnown RBP4.42□□□□□ -1.7
CHKA-208ENST00000533910 TNFRSF19Q9NS68 423 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 GNG13Q9P2W3 67 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 VAX2Q9UIW0 290 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 ARL2-SNX15V9GYD0 113 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 FASNP49327 2511 aaKnown RBP4.42□□□□□ -1.7
CHKA-208ENST00000533910 TEX15Q9BXT5 2789 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 SVEP1Q4LDE5 3571 aa4.42□□□□□ -1.7
CHKA-208ENST00000533910 CSMD1Q96PZ7 3565 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 IGHV3-21A0A0B4J1V1 117 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 M0QZ24 198 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 M0R036 132 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 HMGB3O15347 200 aaKnown RBP4.41□□□□□ -1.7
CHKA-208ENST00000533910 IGHG2P01859 326 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 APOC3P02656 99 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 GATA2P23769 480 aaPredicted RBP4.41□□□□□ -1.7
CHKA-208ENST00000533910 GCHFRP30047 84 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 CD81P60033 236 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 GUCA2BQ16661 112 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 ECSCRQ19T08 205 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 DEFB112Q30KQ8 113 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 FAM78BQ5VT40 261 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 SPATA31B1PQ5VZV4 182 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 KCNIP4Q6PIL6 250 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 UNQ5815/PRO19632Q6UWF5 114 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 PATE2Q6UY27 113 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 MIR17HGQ75NE6 70 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 SLC35E3Q7Z769 313 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 CIARTQ8N365 385 aaPredicted RBP4.41□□□□□ -1.7
CHKA-208ENST00000533910 TEX29Q8N6K0 151 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 CYB561D1Q8N8Q1 229 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 VN1R17PQ8TDU5 208 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 RXFP4Q8TDU9 374 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 FAM167A-AS1Q96KT0 104 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 C21orf62Q9NYP8 219 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 TECRQ9NZ01 308 aaKnown RBP4.41□□□□□ -1.7
CHKA-208ENST00000533910 THYN1Q9P016 225 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 COX11Q9Y6N1 276 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 MXRA5Q9NR99 2828 aa4.41□□□□□ -1.7
CHKA-208ENST00000533910 TLN2Q9Y4G6 2542 aa4.4□□□□□ -1.7
CHKA-208ENST00000533910 TRAV30A0A087WSZ9 112 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 TRAV41A0A0B4J266 112 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 G3V318 75 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 TMEM250H0YL14 139 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 H3BUA1 57 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 SNAI2O43623 268 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 COX7A2P2O60397 106 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 OR2J3O76001 311 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 TOMM40O96008 361 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 IGHV4-59P01825 116 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 C8orf88P0DMB2 117 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 TAS2R45P59539 299 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 YPEL3P61236 119 aaPredicted RBP4.4□□□□□ -1.71
CHKA-208ENST00000533910 LY6EQ16553 131 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 TIGITQ495A1 244 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 SOHLH1Q5JUK2 328 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 MORN5Q5VZ52 161 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 C10orf113Q5VZT2 155 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 ATRAIDQ6UW56 229 aa4.4□□□□□ -1.71
CHKA-208ENST00000533910 SIGLEC15Q6ZMC9 328 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms