RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 C1orf194Q5T5A4 169 aa16.84■□□□□ 0.29
AP004608.1-202ENST00000533390 LCNL1Q6ZST4 164 aa16.84■□□□□ 0.29
AP004608.1-202ENST00000533390 SIGLECL1Q8N7X8 197 aa16.84■□□□□ 0.29
AP004608.1-202ENST00000533390 BIN3Q9NQY0 253 aa16.84■□□□□ 0.29
AP004608.1-202ENST00000533390 NBPF19A0A087WUL8 3843 aa16.83■□□□□ 0.29
AP004608.1-202ENST00000533390 TRBV12-3P01733 135 aa16.83■□□□□ 0.28
AP004608.1-202ENST00000533390 S100A6P06703 90 aa16.83■□□□□ 0.28
AP004608.1-202ENST00000533390 RPEL1Q2QD12 228 aa16.83■□□□□ 0.28
AP004608.1-202ENST00000533390 ZNF785A8K8V0 405 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 ZNF253O75346 499 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 LTAP01374 205 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 TRGC2P03986 189 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 PSMB8P28062 276 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 CSN1S1P47710 185 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 SLC35B1P78383 322 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 FAM209BQ5JX69 171 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 SMAD5-AS1Q9Y6J3 95 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 ZANQ9Y493 2812 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 ZNF207O43670 478 aaKnown RBP16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 ZNF702PQ9H963 129 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 SERTAD4Q9NUC0 356 aa16.82■□□□□ 0.28
AP004608.1-202ENST00000533390 ZNF320A2RRD8 509 aa16.81■□□□□ 0.28
AP004608.1-202ENST00000533390 PRR27Q6MZM9 219 aa16.81■□□□□ 0.28
AP004608.1-202ENST00000533390 FAM231DQ6ZW35 169 aa16.81■□□□□ 0.28
AP004608.1-202ENST00000533390 TMEM75Q8N9X5 138 aa16.81■□□□□ 0.28
AP004608.1-202ENST00000533390 TRAV9-1A0A075B6T8 112 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 A0A087X0K7 114 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 IGHV3-66A0A0C4DH42 116 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 ZNF705GA8MUZ8 300 aaPredicted RBP16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 DIRC3C9JPN6 131 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 Q86TA4 180 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 U3KQE9 123 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 TRBV6-1A0A0K0K1D8 114 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 SERTM2A0A1B0GWG4 89 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 M0R3E3 92 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 CD5LO43866 347 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 TYMSP04818 313 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 ARL6IP6Q8N6S5 226 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 MLST8Q9BVC4 326 aa16.8■□□□□ 0.28
AP004608.1-202ENST00000533390 IGHV3OR16-13A0A075B7E8 117 aa16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 TRAV8-1A0A0A6YYK1 113 aa16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 IGHV3-74A0A0B4J1X5 117 aa16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 GATCO43716 136 aaKnown RBP16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 APOHP02749 345 aaPredicted RBP16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 PRNTQ86SH4 94 aa16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 TMEM86BQ8N661 226 aa16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 SAV1Q9H4B6 383 aaPredicted RBP16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 PEF1Q9UBV8 284 aaKnown RBP16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 ITPR3Q14573 2671 aa16.79■□□□□ 0.28
AP004608.1-202ENST00000533390 IGHV3-49A0A0A0MS15 119 aa16.78■□□□□ 0.28
AP004608.1-202ENST00000533390 PSG3Q16557 428 aa16.78■□□□□ 0.28
AP004608.1-202ENST00000533390 DUX5Q96PT3 197 aa16.78■□□□□ 0.28
AP004608.1-202ENST00000533390 IGLV2-11P01706 119 aa16.78■□□□□ 0.28
AP004608.1-202ENST00000533390 TMEM183AQ8IXX5 376 aa16.78■□□□□ 0.28
AP004608.1-202ENST00000533390 NUDT10Q8NFP7 164 aa16.78■□□□□ 0.28
AP004608.1-202ENST00000533390 NUDT11Q96G61 164 aa16.78■□□□□ 0.28
AP004608.1-202ENST00000533390 SLC50A1Q9BRV3 221 aa16.78■□□□□ 0.28
AP004608.1-202ENST00000533390 ZNF331Q9NQX6 463 aaPredicted RBP16.78■□□□□ 0.28
AP004608.1-202ENST00000533390 TEX15Q9BXT5 2789 aa16.77■□□□□ 0.28
AP004608.1-202ENST00000533390 MEOX2P50222 304 aa16.77■□□□□ 0.27
AP004608.1-202ENST00000533390 RPL19P84098 196 aaKnown RBP16.77■□□□□ 0.27
AP004608.1-202ENST00000533390 UNQ9165/PRO28630Q6UXU0 137 aa16.77■□□□□ 0.27
AP004608.1-202ENST00000533390 YAE1D1Q9NRH1 226 aa16.77■□□□□ 0.27
AP004608.1-202ENST00000533390 ELANEP08246 267 aa16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 C10orf99Q6UWK7 81 aa16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 PSG8Q9UQ74 426 aa16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 ZFP30Q9Y2G7 519 aa16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 SNRPEP62304 92 aaKnown RBP16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 KRTAP1-1Q07627 177 aa16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 FOXE3Q13461 319 aa16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 C16orf54Q6UWD8 224 aa16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 GRAMD2BQ96HH9 432 aa16.76■□□□□ 0.27
AP004608.1-202ENST00000533390 PDZD2O15018 2839 aa16.75■□□□□ 0.27
AP004608.1-202ENST00000533390 A0A1W2PS18 150 aa16.75■□□□□ 0.27
AP004608.1-202ENST00000533390 DAZAP1Q96EP5 407 aaKnown RBP16.75■□□□□ 0.27
AP004608.1-202ENST00000533390 ZNF492Q9P255 531 aa16.75■□□□□ 0.27
AP004608.1-202ENST00000533390 Q8N2B8 174 aa16.74■□□□□ 0.27
AP004608.1-202ENST00000533390 FRZBQ92765 325 aa16.74■□□□□ 0.27
AP004608.1-202ENST00000533390 CHEK1O14757 476 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST1H2BKO60814 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 RPLP1P05386 114 aaKnown RBP16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST1H2BJP06899 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 TRGC1P0CF51 173 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST1H2BOP23527 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST1H2BBP33778 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST1H2BDP58876 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST1H2BCP62807 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST2H2BEQ16778 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 FAM106AQ4KMX7 169 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST1H2BHQ93079 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST1H2BNQ99877 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 HIST1H2BMQ99879 126 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 CCDC168Q8NDH2 2452 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 SMIM27A0A1W2PRY6 76 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 C5orf52A6NGY3 159 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 FBLL1A6NHQ2 334 aaKnown RBP16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 GLMPQ8WWB7 406 aa16.73■□□□□ 0.27
AP004608.1-202ENST00000533390 P01737 135 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms