RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 MRPL32Q9BYC8 188 aaKnown RBP12.26□□□□□ -0.45
PKP3-209ENST00000533069 TEX46H3BTG2 121 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 HYPMO75409 117 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 RAB14P61106 215 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 RHOBP62745 196 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 BLOC1S1P78537 153 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 LEMD1Q68G75 181 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 SIGLEC15Q6ZMC9 328 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 TMEM182Q6ZP80 229 aaPredicted RBP12.25□□□□□ -0.45
PKP3-209ENST00000533069 PBDC1Q9BVG4 233 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 DNAJC4Q9NNZ3 241 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 CSMD3Q7Z407 3707 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 STARD9Q9P2P6 4700 aa12.25□□□□□ -0.45
PKP3-209ENST00000533069 COX7A2P2O60397 106 aa12.24□□□□□ -0.45
PKP3-209ENST00000533069 ZNF688P0C7X2 276 aa12.24□□□□□ -0.45
PKP3-209ENST00000533069 STHQ8IWL8 128 aa12.24□□□□□ -0.45
PKP3-209ENST00000533069 OR10G4Q8NGN3 311 aa12.24□□□□□ -0.45
PKP3-209ENST00000533069 OR10G9Q8NGN4 311 aa12.24□□□□□ -0.45
PKP3-209ENST00000533069 OR10G7Q8NGN6 311 aa12.24□□□□□ -0.45
PKP3-209ENST00000533069 ACTR3CQ9C0K3 210 aaPredicted RBP12.24□□□□□ -0.45
PKP3-209ENST00000533069 SEPSECSQ9HD40 501 aaKnown RBP12.24□□□□□ -0.45
PKP3-209ENST00000533069 NRN1Q9NPD7 142 aa12.24□□□□□ -0.45
PKP3-209ENST00000533069 A0A1W2PPV4 95 aa12.23□□□□□ -0.45
PKP3-209ENST00000533069 ATF4P18848 351 aaPredicted RBP12.23□□□□□ -0.45
PKP3-209ENST00000533069 TAS2R45P59539 299 aa12.23□□□□□ -0.45
PKP3-209ENST00000533069 RAB2AP61019 212 aa12.23□□□□□ -0.45
PKP3-209ENST00000533069 C1orf194Q5T5A4 169 aa12.23□□□□□ -0.45
PKP3-209ENST00000533069 C10orf113Q5VZT2 155 aa12.23□□□□□ -0.45
PKP3-209ENST00000533069 HIGD1AQ9Y241 93 aa12.23□□□□□ -0.45
PKP3-209ENST00000533069 A0A0J9YWU9 116 aa12.22□□□□□ -0.45
PKP3-209ENST00000533069 CA1P00915 261 aaPredicted RBP12.22□□□□□ -0.45
PKP3-209ENST00000533069 OR5G3P0C626 314 aa12.22□□□□□ -0.45
PKP3-209ENST00000533069 LYZP61626 148 aa12.22□□□□□ -0.45
PKP3-209ENST00000533069 SNRPD3P62318 126 aaKnown RBP12.22□□□□□ -0.45
PKP3-209ENST00000533069 IFITM2Q01629 132 aa12.22□□□□□ -0.45
PKP3-209ENST00000533069 TRPT1Q86TN4 253 aaKnown RBP12.22□□□□□ -0.45
PKP3-209ENST00000533069 RPRMQ9NS64 109 aa12.22□□□□□ -0.45
PKP3-209ENST00000533069 DYNC2H1Q8NCM8 4307 aaKnown RBP12.21□□□□□ -0.45
PKP3-209ENST00000533069 LCE6AA0A183 80 aa12.21□□□□□ -0.45
PKP3-209ENST00000533069 CTXND1A0A1B0GTU2 59 aa12.21□□□□□ -0.45
PKP3-209ENST00000533069 ZNF705EA8MWA4 302 aaPredicted RBP12.21□□□□□ -0.45
PKP3-209ENST00000533069 HBE1P02100 147 aa12.21□□□□□ -0.45
PKP3-209ENST00000533069 ORM2P19652 201 aa12.21□□□□□ -0.45
PKP3-209ENST00000533069 CDC34P49427 236 aaPredicted RBP12.21□□□□□ -0.45
PKP3-209ENST00000533069 MORN3Q6PF18 240 aaPredicted RBP12.21□□□□□ -0.45
PKP3-209ENST00000533069 OR1B1Q8NGR6 318 aa12.21□□□□□ -0.45
PKP3-209ENST00000533069 FUT9Q9Y231 359 aa12.21□□□□□ -0.45
PKP3-209ENST00000533069 GATA2P23769 480 aaPredicted RBP12.2□□□□□ -0.46
PKP3-209ENST00000533069 PSMG4Q5JS54 123 aa12.2□□□□□ -0.46
PKP3-209ENST00000533069 FAM78BQ5VT40 261 aa12.2□□□□□ -0.46
PKP3-209ENST00000533069 RPP25LQ8N5L8 163 aaKnown RBP12.2□□□□□ -0.46
PKP3-209ENST00000533069 FAM213BQ8TBF2 198 aa12.2□□□□□ -0.46
PKP3-209ENST00000533069 GPR82Q96P67 336 aa12.2□□□□□ -0.46
PKP3-209ENST00000533069 RARRES2Q99969 163 aa12.2□□□□□ -0.46
PKP3-209ENST00000533069 TRAV1-1A0A0B4J248 108 aa12.19□□□□□ -0.46
PKP3-209ENST00000533069 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
PKP3-209ENST00000533069 KHDC3LQ587J8 217 aa12.19□□□□□ -0.46
PKP3-209ENST00000533069 ACTL10Q5JWF8 245 aa12.19□□□□□ -0.46
PKP3-209ENST00000533069 PQLC2Q6ZP29 291 aa12.19□□□□□ -0.46
PKP3-209ENST00000533069 LINC00305Q7Z4B0 112 aa12.19□□□□□ -0.46
PKP3-209ENST00000533069 MBD3L1Q8WWY6 194 aa12.19□□□□□ -0.46
PKP3-209ENST00000533069 TMEM37Q8WXS4 190 aa12.19□□□□□ -0.46
PKP3-209ENST00000533069 RYR2Q92736 4967 aa12.19□□□□□ -0.46
PKP3-209ENST00000533069 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
PKP3-209ENST00000533069 CLLU1Q5K131 121 aa12.18□□□□□ -0.46
PKP3-209ENST00000533069 FAM74A1Q5RGS3 127 aa12.18□□□□□ -0.46
PKP3-209ENST00000533069 SAMD13Q5VXD3 122 aa12.18□□□□□ -0.46
PKP3-209ENST00000533069 FAM122CQ6P4D5 195 aa12.18□□□□□ -0.46
PKP3-209ENST00000533069 OR11H2Q8NH07 326 aa12.18□□□□□ -0.46
PKP3-209ENST00000533069 SHANK2-AS3Q9BTD1 123 aa12.18□□□□□ -0.46
PKP3-209ENST00000533069 SLC25A39Q9BZJ4 359 aaPredicted RBP12.18□□□□□ -0.46
PKP3-209ENST00000533069 C11orf68Q9H3H3 251 aaKnown RBP12.18□□□□□ -0.46
PKP3-209ENST00000533069 TENM2Q9NT68 2774 aa12.18□□□□□ -0.46
PKP3-209ENST00000533069 CXorf65A6NEN9 183 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 H3BRN7 92 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 CXorf1O96002 111 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 ID1P41134 155 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 PPT1P50897 306 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 PATE2Q6UY27 113 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 OR8I2Q8N0Y5 310 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 RAB24Q969Q5 203 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 DOK5Q9P104 306 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 RFNGQ9Y644 331 aa12.17□□□□□ -0.46
PKP3-209ENST00000533069 NUPR2A6NF83 97 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 STAG3L2P0CL84 134 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 STAG3L3P0CL85 134 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 RPL7P18124 248 aaKnown RBP12.16□□□□□ -0.46
PKP3-209ENST00000533069 PSMB3P49720 205 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 MEOX2P50222 304 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 GCSAMLQ5JQS6 135 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 BPIFA4PQ86YQ2 179 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 LYPD6BQ8NI32 183 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 PLA2G2EQ9NZK7 142 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 TMEM14CQ9P0S9 112 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 LYSTQ99698 3801 aa12.16□□□□□ -0.46
PKP3-209ENST00000533069 MAP1LC3B2A6NCE7 125 aa12.15□□□□□ -0.46
PKP3-209ENST00000533069 NMBP08949 121 aa12.15□□□□□ -0.46
PKP3-209ENST00000533069 TAGLN2P37802 199 aaKnown RBP12.15□□□□□ -0.46
PKP3-209ENST00000533069 GALR1P47211 349 aa12.15□□□□□ -0.46
PKP3-209ENST00000533069 NUTF2P61970 127 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms