RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ZNF680Q8NEM1 530 aa11.19□□□□□ -0.62
CPSF1-210ENST00000532935 PHYHIPLQ96FC7 376 aa11.19□□□□□ -0.62
CPSF1-210ENST00000532935 C20orf173Q96LM9 149 aa11.19□□□□□ -0.62
CPSF1-210ENST00000532935 CLEC5AQ9NY25 188 aa11.19□□□□□ -0.62
CPSF1-210ENST00000532935 DNAH1Q9P2D7 4330 aa11.19□□□□□ -0.62
CPSF1-210ENST00000532935 ALMS1Q8TCU4 4167 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 UBE2L5PA0A1B0GUS4 154 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 COX7A2P2O60397 106 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 NUTF2P61970 127 aaKnown RBP11.18□□□□□ -0.62
CPSF1-210ENST00000532935 BAXQ07812 192 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 ATP6V1FQ16864 119 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 CSNK1G2-AS1Q8NCQ2 148 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 STOML3Q8TAV4 291 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 C11orf68Q9H3H3 251 aaKnown RBP11.18□□□□□ -0.62
CPSF1-210ENST00000532935 RPRMQ9NS64 109 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 RNF24Q9Y225 148 aa11.18□□□□□ -0.62
CPSF1-210ENST00000532935 ELOA3CA0A087WX78 387 aaPredicted RBP11.17□□□□□ -0.62
CPSF1-210ENST00000532935 CXorf65A6NEN9 183 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 F6UB75 175 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 PMS2P11Q13670 270 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 MIC13Q5XKP0 118 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 EBLN2Q6P2I7 272 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 TMEM37Q8WXS4 190 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 XCL2Q9UBD3 114 aa11.17□□□□□ -0.62
CPSF1-210ENST00000532935 A0A087X0K7 114 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 A0A0J9YX75 114 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 ZNF705EA8MWA4 302 aaPredicted RBP11.16□□□□□ -0.62
CPSF1-210ENST00000532935 JTBO76095 146 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 PRR20EP86478 221 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 PRR20CP86479 221 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 PRR20DP86480 221 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 PRR20BP86481 221 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 PRR20AP86496 221 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 NHLH2Q02577 135 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 C10orf113Q5VZT2 155 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 IGFL4Q6B9Z1 124 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 Q6ZRG5 221 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 Q8NAQ8 132 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 OR4B1Q8NGF8 309 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 DNAJC4Q9NNZ3 241 aa11.16□□□□□ -0.62
CPSF1-210ENST00000532935 HYDINQ4G0P3 5121 aa11.15□□□□□ -0.62
CPSF1-210ENST00000532935 LCE6AA0A183 80 aa11.15□□□□□ -0.62
CPSF1-210ENST00000532935 MRPS12O15235 138 aaKnown RBP11.15□□□□□ -0.62
CPSF1-210ENST00000532935 DEFB4AO15263 64 aa11.15□□□□□ -0.62
CPSF1-210ENST00000532935 TPT1P13693 172 aaKnown RBP11.15□□□□□ -0.62
CPSF1-210ENST00000532935 FGF7P21781 194 aa11.15□□□□□ -0.62
CPSF1-210ENST00000532935 RPL29P47914 159 aaKnown RBP11.15□□□□□ -0.62
CPSF1-210ENST00000532935 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
CPSF1-210ENST00000532935 EIF5AL1Q6IS14 154 aaKnown RBP11.15□□□□□ -0.62
CPSF1-210ENST00000532935 RNF182Q8N6D2 247 aa11.15□□□□□ -0.62
CPSF1-210ENST00000532935 OR5C1Q8NGR4 320 aa11.15□□□□□ -0.62
CPSF1-210ENST00000532935 ZNF471Q9BX82 626 aaPredicted RBP11.15□□□□□ -0.62
CPSF1-210ENST00000532935 X6R8D5 127 aa11.15□□□□□ -0.62
CPSF1-210ENST00000532935 IGHV4-28A0A0C4DH34 117 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 MPDU1O75352 247 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 MIFP14174 115 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 FXYD7P58549 80 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 RAB14P61106 215 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 B2MP61769 119 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 MORN5Q5VZ52 161 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 ZNF709Q8N972 641 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 OR1L4Q8NGR5 311 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 LRRC20Q8TCA0 184 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 PFDN5Q99471 154 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 CYTL1Q9NRR1 136 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 SLC39A9Q9NUM3 307 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 PXMP4Q9Y6I8 212 aa11.14□□□□□ -0.63
CPSF1-210ENST00000532935 BORCS7-ASMTA0A0B4J1R7 106 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 NUPR2A6NF83 97 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
CPSF1-210ENST00000532935 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 PSG9Q00887 426 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
CPSF1-210ENST00000532935 CLLU1Q5K131 121 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 BPIFA4PQ86YQ2 179 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 BAP18Q8IXM2 172 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 ZNF738Q8NE65 137 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 C11orf45Q8TAV5 145 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 NPCDR1Q9BY65 106 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 SLC35B3Q9H1N7 401 aa11.13□□□□□ -0.63
CPSF1-210ENST00000532935 A8MTW9 85 aa11.12□□□□□ -0.63
CPSF1-210ENST00000532935 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
CPSF1-210ENST00000532935 NANOS2P60321 138 aaKnown RBP11.12□□□□□ -0.63
CPSF1-210ENST00000532935 ZNF266Q14584 549 aa11.12□□□□□ -0.63
CPSF1-210ENST00000532935 CLINT1Q14677 625 aa11.12□□□□□ -0.63
CPSF1-210ENST00000532935 CEMP1Q6PRD7 247 aaPredicted RBP11.12□□□□□ -0.63
CPSF1-210ENST00000532935 TRAV5A0A0B4J249 113 aa11.11□□□□□ -0.63
CPSF1-210ENST00000532935 DUSP14O95147 198 aaKnown RBP11.11□□□□□ -0.63
CPSF1-210ENST00000532935 SNRPCP09234 159 aaKnown RBP11.11□□□□□ -0.63
CPSF1-210ENST00000532935 PSG3Q16557 428 aa11.11□□□□□ -0.63
CPSF1-210ENST00000532935 LCN15Q6UWW0 184 aa11.11□□□□□ -0.63
CPSF1-210ENST00000532935 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
CPSF1-210ENST00000532935 ZNF705AQ6ZN79 300 aaPredicted RBP11.11□□□□□ -0.63
CPSF1-210ENST00000532935 PHLDA1Q8WV24 401 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms