RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 OR2T35Q8NGX2 323 aa14.48□□□□□ -0.09
CPSF1-209ENST00000532725 SAT2Q96F10 170 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-209ENST00000532725 RARRES2Q99969 163 aa14.48□□□□□ -0.09
CPSF1-209ENST00000532725 KCNIP2Q9NS61 270 aa14.48□□□□□ -0.09
CPSF1-209ENST00000532725 HLA-DMBP28068 263 aa14.47□□□□□ -0.09
CPSF1-209ENST00000532725 NUTF2P61970 127 aaKnown RBP14.47□□□□□ -0.09
CPSF1-209ENST00000532725 FAM78BQ5VT40 261 aa14.47□□□□□ -0.09
CPSF1-209ENST00000532725 LCN15Q6UWW0 184 aa14.47□□□□□ -0.09
CPSF1-209ENST00000532725 OR11H2Q8NH07 326 aa14.47□□□□□ -0.09
CPSF1-209ENST00000532725 LRRC20Q8TCA0 184 aa14.47□□□□□ -0.09
CPSF1-209ENST00000532725 ZNF331Q9NQX6 463 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-209ENST00000532725 G3V3Q6 166 aa14.46□□□□□ -0.09
CPSF1-209ENST00000532725 IGKV3-20P01619 116 aa14.46□□□□□ -0.09
CPSF1-209ENST00000532725 PSG3Q16557 428 aa14.46□□□□□ -0.09
CPSF1-209ENST00000532725 OR4B1Q8NGF8 309 aa14.46□□□□□ -0.09
CPSF1-209ENST00000532725 CLEC5AQ9NY25 188 aa14.46□□□□□ -0.09
CPSF1-209ENST00000532725 TMEM14CQ9P0S9 112 aa14.46□□□□□ -0.09
CPSF1-209ENST00000532725 RFNGQ9Y644 331 aa14.46□□□□□ -0.09
CPSF1-209ENST00000532725 A0A0J9YWU9 116 aa14.45□□□□□ -0.1
CPSF1-209ENST00000532725 A8MTW9 85 aa14.45□□□□□ -0.1
CPSF1-209ENST00000532725 H3BTX0 84 aa14.45□□□□□ -0.1
CPSF1-209ENST00000532725 MIR17HGQ75NE6 70 aa14.45□□□□□ -0.1
CPSF1-209ENST00000532725 FAM167A-AS1Q96KT0 104 aa14.45□□□□□ -0.1
CPSF1-209ENST00000532725 SLC50A1Q9BRV3 221 aa14.45□□□□□ -0.1
CPSF1-209ENST00000532725 ZNF586Q9NXT0 402 aa14.45□□□□□ -0.1
CPSF1-209ENST00000532725 SLC17A3O00476 420 aa14.44□□□□□ -0.1
CPSF1-209ENST00000532725 PSG9Q00887 426 aa14.44□□□□□ -0.1
CPSF1-209ENST00000532725 GUK1Q16774 197 aa14.44□□□□□ -0.1
CPSF1-209ENST00000532725 ZNF738Q8NE65 137 aa14.44□□□□□ -0.1
CPSF1-209ENST00000532725 SLC25A2Q9BXI2 301 aa14.44□□□□□ -0.1
CPSF1-209ENST00000532725 C1QTNF4Q9BXJ3 329 aa14.44□□□□□ -0.1
CPSF1-209ENST00000532725 XCL2Q9UBD3 114 aa14.44□□□□□ -0.1
CPSF1-209ENST00000532725 TNFSF18Q9UNG2 199 aa14.44□□□□□ -0.1
CPSF1-209ENST00000532725 RNF222A6NCQ9 220 aa14.43□□□□□ -0.1
CPSF1-209ENST00000532725 ZNF705DP0CH99 300 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-209ENST00000532725 ZNF705BP0CI00 300 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-209ENST00000532725 HIST1H1EP10412 219 aaKnown RBP14.43□□□□□ -0.1
CPSF1-209ENST00000532725 FFAR4Q5NUL3 377 aa14.43□□□□□ -0.1
CPSF1-209ENST00000532725 CASC10Q5T4H9 136 aa14.43□□□□□ -0.1
CPSF1-209ENST00000532725 AMTNQ6UX39 209 aa14.43□□□□□ -0.1
CPSF1-209ENST00000532725 INO80EQ8NBZ0 244 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-209ENST00000532725 TRBV19A0A075B6N1 114 aa14.42□□□□□ -0.1
CPSF1-209ENST00000532725 FXYD6-FXYD2A0A087WZ82 144 aa14.42□□□□□ -0.1
CPSF1-209ENST00000532725 ZNF705EA8MWA4 302 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-209ENST00000532725 ZNF253O75346 499 aa14.42□□□□□ -0.1
CPSF1-209ENST00000532725 DUSP14O95147 198 aaKnown RBP14.42□□□□□ -0.1
CPSF1-209ENST00000532725 PYYP10082 97 aa14.42□□□□□ -0.1
CPSF1-209ENST00000532725 CNN1P51911 297 aaKnown RBP14.42□□□□□ -0.1
CPSF1-209ENST00000532725 FXYD7P58549 80 aa14.42□□□□□ -0.1
CPSF1-209ENST00000532725 MRPL32Q9BYC8 188 aaKnown RBP14.42□□□□□ -0.1
CPSF1-209ENST00000532725 SLC35B3Q9H1N7 401 aa14.42□□□□□ -0.1
CPSF1-209ENST00000532725 FUT9Q9Y231 359 aa14.42□□□□□ -0.1
CPSF1-209ENST00000532725 TIMM9Q9Y5J7 89 aa14.42□□□□□ -0.1
CPSF1-209ENST00000532725 ZNF705FA8MVS1 300 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-209ENST00000532725 ZNF266Q14584 549 aa14.41□□□□□ -0.1
CPSF1-209ENST00000532725 OR8A1Q8NGG7 326 aa14.41□□□□□ -0.1
CPSF1-209ENST00000532725 RPUSD4Q96CM3 377 aaKnown RBP14.41□□□□□ -0.1
CPSF1-209ENST00000532725 X6R8D5 127 aa14.41□□□□□ -0.1
CPSF1-209ENST00000532725 NDUFB4O95168 129 aa14.4□□□□□ -0.1
CPSF1-209ENST00000532725 IL17DQ8TAD2 202 aa14.4□□□□□ -0.1
CPSF1-209ENST00000532725 OR51M1Q9H341 326 aa14.4□□□□□ -0.1
CPSF1-209ENST00000532725 SMLR1H3BR10 107 aa14.39□□□□□ -0.11
CPSF1-209ENST00000532725 PRB4P10163 310 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-209ENST00000532725 ZFAND6Q6FIF0 208 aa14.39□□□□□ -0.11
CPSF1-209ENST00000532725 ZNF503Q96F45 646 aa14.39□□□□□ -0.11
CPSF1-209ENST00000532725 MFFQ9GZY8 342 aa14.39□□□□□ -0.11
CPSF1-209ENST00000532725 PRAC2D3DTV9 90 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 NBEAP1P0C6P0 100 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 M6PRP20645 277 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 RHOBP62745 196 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 HIST1H1AQ02539 215 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-209ENST00000532725 PDE6HQ13956 83 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 ZNF705AQ6ZN79 300 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-209ENST00000532725 Q8NAQ8 132 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 HSD17B11Q8NBQ5 300 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 FXYD5Q96DB9 178 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 PAXXQ9BUH6 204 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 C11orf68Q9H3H3 251 aaKnown RBP14.38□□□□□ -0.11
CPSF1-209ENST00000532725 CSMD3Q7Z407 3707 aa14.38□□□□□ -0.11
CPSF1-209ENST00000532725 DEFB4AO15263 64 aa14.37□□□□□ -0.11
CPSF1-209ENST00000532725 RBMY1A1P0DJD3 496 aaKnown RBP14.37□□□□□ -0.11
CPSF1-209ENST00000532725 RBMY1CP0DJD4 496 aa14.37□□□□□ -0.11
CPSF1-209ENST00000532725 MIFP14174 115 aa14.37□□□□□ -0.11
CPSF1-209ENST00000532725 ATP6V0CP27449 155 aa14.37□□□□□ -0.11
CPSF1-209ENST00000532725 RBMY1FQ15415 496 aaKnown RBP14.37□□□□□ -0.11
CPSF1-209ENST00000532725 ACOT6Q3I5F7 207 aaPredicted RBP14.37□□□□□ -0.11
CPSF1-209ENST00000532725 OR2G3Q8NGZ4 309 aa14.37□□□□□ -0.11
CPSF1-209ENST00000532725 BLNKQ8WV28 456 aa14.37□□□□□ -0.11
CPSF1-209ENST00000532725 RNF141Q8WVD5 230 aa14.37□□□□□ -0.11
CPSF1-209ENST00000532725 PSMG3Q9BT73 122 aaPredicted RBP14.37□□□□□ -0.11
CPSF1-209ENST00000532725 IGHV4-28A0A0C4DH34 117 aa14.36□□□□□ -0.11
CPSF1-209ENST00000532725 ARPC5O15511 151 aa14.36□□□□□ -0.11
CPSF1-209ENST00000532725 RPL7L1Q6DKI1 246 aaKnown RBP14.36□□□□□ -0.11
CPSF1-209ENST00000532725 CRXO43186 299 aaPredicted RBP14.35□□□□□ -0.11
CPSF1-209ENST00000532725 OR10J4P0C629 311 aa14.35□□□□□ -0.11
CPSF1-209ENST00000532725 RAB2AP61019 212 aa14.35□□□□□ -0.11
CPSF1-209ENST00000532725 Q6ZNX1 250 aa14.35□□□□□ -0.11
CPSF1-209ENST00000532725 C1orf158Q8N1D5 194 aa14.35□□□□□ -0.11
CPSF1-209ENST00000532725 OR11H4Q8NGC9 324 aa14.35□□□□□ -0.11
CPSF1-209ENST00000532725 MRPL53Q96EL3 112 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms