RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 RLN2P04090 185 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 CXCL3P19876 107 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 PSG3Q16557 428 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 ATP6V1FQ16864 119 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 C1orf158Q8N1D5 194 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 TMEM37Q8WXS4 190 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 PPP1R14DQ9NXH3 145 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 IGSF23A1L1A6 192 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 INMT-MINDY4F8WBC2 141 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 MRPS12O15235 138 aaKnown RBP12.37□□□□□ -0.43
PHRF1-204ENST00000532550 PRAF2O60831 178 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 IFITM3Q01628 133 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 BAXQ07812 192 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 MIC13Q5XKP0 118 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 AMTNQ6UX39 209 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 OR11H7Q8NGC8 314 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 OR1L4Q8NGR5 311 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 IGF2BP2-AS1Q96M15 143 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 APLNQ9ULZ1 77 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 WDR83OSQ9Y284 106 aa12.37□□□□□ -0.43
PHRF1-204ENST00000532550 DEFB131BA0A096LNP1 70 aa12.36□□□□□ -0.43
PHRF1-204ENST00000532550 SIX6O95475 246 aa12.36□□□□□ -0.43
PHRF1-204ENST00000532550 CXCL2P19875 107 aa12.36□□□□□ -0.43
PHRF1-204ENST00000532550 RHOBP62745 196 aa12.36□□□□□ -0.43
PHRF1-204ENST00000532550 HIST1H1AQ02539 215 aaPredicted RBP12.36□□□□□ -0.43
PHRF1-204ENST00000532550 SPINK13Q1W4C9 94 aa12.36□□□□□ -0.43
PHRF1-204ENST00000532550 RRN3P1Q2M238 152 aa12.36□□□□□ -0.43
PHRF1-204ENST00000532550 VWC2Q2TAL6 325 aa12.36□□□□□ -0.43
PHRF1-204ENST00000532550 LCN15Q6UWW0 184 aa12.36□□□□□ -0.43
PHRF1-204ENST00000532550 PFDN5Q99471 154 aa12.36□□□□□ -0.43
PHRF1-204ENST00000532550 UBE2L5PA0A1B0GUS4 154 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 M0R2Z0 102 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 SNRPCP09234 159 aaKnown RBP12.35□□□□□ -0.43
PHRF1-204ENST00000532550 RPL29P47914 159 aaKnown RBP12.35□□□□□ -0.43
PHRF1-204ENST00000532550 DEFA1P59665 94 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 DEFA3P59666 94 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 PRR20EP86478 221 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 PRR20CP86479 221 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 PRR20DP86480 221 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 PRR20BP86481 221 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 PRR20AP86496 221 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 CYCSP99999 105 aaKnown RBP12.35□□□□□ -0.43
PHRF1-204ENST00000532550 OPCMLQ14982 345 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 OR8A1Q8NGG7 326 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 RPUSD4Q96CM3 377 aaKnown RBP12.35□□□□□ -0.43
PHRF1-204ENST00000532550 SLC50A1Q9BRV3 221 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 RNF126Q9BV68 326 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 NMES1Q9C002 83 aa12.35□□□□□ -0.43
PHRF1-204ENST00000532550 IGHV4-4A0A075B6R2 117 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 TEX48A0A1B0GUV7 120 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 LOC102723971A0A1B0GUV8 181 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 E5RGE8 158 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 INSP01308 110 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 FGF7P21781 194 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 B2MP61769 119 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 RPP25LQ8N5L8 163 aaKnown RBP12.34□□□□□ -0.43
PHRF1-204ENST00000532550 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 ZNF331Q9NQX6 463 aaPredicted RBP12.34□□□□□ -0.43
PHRF1-204ENST00000532550 BATF3Q9NR55 127 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 SLC39A9Q9NUM3 307 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 KMT2AQ03164 3969 aa12.34□□□□□ -0.43
PHRF1-204ENST00000532550 NHLH2Q02577 135 aa12.33□□□□□ -0.44
PHRF1-204ENST00000532550 FAM222AQ5U5X8 452 aa12.33□□□□□ -0.44
PHRF1-204ENST00000532550 MORN5Q5VZ52 161 aa12.33□□□□□ -0.44
PHRF1-204ENST00000532550 CHAC2Q8WUX2 184 aa12.33□□□□□ -0.44
PHRF1-204ENST00000532550 MARVELD1Q9BSK0 173 aa12.33□□□□□ -0.44
PHRF1-204ENST00000532550 DKK2Q9UBU2 259 aa12.33□□□□□ -0.44
PHRF1-204ENST00000532550 TRAV5A0A0B4J249 113 aa12.32□□□□□ -0.44
PHRF1-204ENST00000532550 H3BTX0 84 aa12.32□□□□□ -0.44
PHRF1-204ENST00000532550 BOLA2-SMG1P6H3BVE0 249 aa12.32□□□□□ -0.44
PHRF1-204ENST00000532550 CRXO43186 299 aaPredicted RBP12.32□□□□□ -0.44
PHRF1-204ENST00000532550 MPDU1O75352 247 aa12.32□□□□□ -0.44
PHRF1-204ENST00000532550 LRRC37A5PQ49AS3 106 aa12.32□□□□□ -0.44
PHRF1-204ENST00000532550 NIPSNAP3BQ9BS92 247 aa12.32□□□□□ -0.44
PHRF1-204ENST00000532550 YTHDF2Q9Y5A9 579 aaKnown RBP12.32□□□□□ -0.44
PHRF1-204ENST00000532550 PXMP4Q9Y6I8 212 aa12.32□□□□□ -0.44
PHRF1-204ENST00000532550 TRAV12-2A0A075B6T6 113 aa12.31□□□□□ -0.44
PHRF1-204ENST00000532550 SSNA1O43805 119 aa12.31□□□□□ -0.44
PHRF1-204ENST00000532550 IGLC2P0DOY2 106 aa12.31□□□□□ -0.44
PHRF1-204ENST00000532550 GUK1Q16774 197 aa12.31□□□□□ -0.44
PHRF1-204ENST00000532550 BAP18Q8IXM2 172 aa12.31□□□□□ -0.44
PHRF1-204ENST00000532550 OR5C1Q8NGR4 320 aa12.31□□□□□ -0.44
PHRF1-204ENST00000532550 LINC01587Q99440 93 aa12.31□□□□□ -0.44
PHRF1-204ENST00000532550 NDUFAF3Q9BU61 184 aa12.31□□□□□ -0.44
PHRF1-204ENST00000532550 EPPK1P58107 5090 aaKnown RBP12.3□□□□□ -0.44
PHRF1-204ENST00000532550 ZNF705GA8MUZ8 300 aaPredicted RBP12.3□□□□□ -0.44
PHRF1-204ENST00000532550 H3BQ15 152 aa12.3□□□□□ -0.44
PHRF1-204ENST00000532550 PRB4P10163 310 aaPredicted RBP12.3□□□□□ -0.44
PHRF1-204ENST00000532550 OR10J6PQ8NGY7 276 aa12.3□□□□□ -0.44
PHRF1-204ENST00000532550 SAT2Q96F10 170 aaPredicted RBP12.3□□□□□ -0.44
PHRF1-204ENST00000532550 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
PHRF1-204ENST00000532550 OR5AC2Q9NZP5 309 aa12.3□□□□□ -0.44
PHRF1-204ENST00000532550 SLC17A3O00476 420 aa12.29□□□□□ -0.44
PHRF1-204ENST00000532550 CDKN1BP46527 198 aa12.29□□□□□ -0.44
PHRF1-204ENST00000532550 OXA1LQ15070 435 aa12.29□□□□□ -0.44
PHRF1-204ENST00000532550 TMEM256Q8N2U0 113 aa12.29□□□□□ -0.44
PHRF1-204ENST00000532550 NPCDR1Q9BY65 106 aa12.29□□□□□ -0.44
PHRF1-204ENST00000532550 H0YIZ8 118 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms