RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 PHLDA1Q8WV24 401 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-222ENST00000532285 PPP1R1CQ8WVI7 109 aa16.63■□□□□ 0.25
CAPN1-222ENST00000532285 PFDN5Q99471 154 aa16.63■□□□□ 0.25
CAPN1-222ENST00000532285 A8MTW9 85 aa16.62■□□□□ 0.25
CAPN1-222ENST00000532285 DUSP14O95147 198 aaKnown RBP16.62■□□□□ 0.25
CAPN1-222ENST00000532285 CXCL2P19875 107 aa16.62■□□□□ 0.25
CAPN1-222ENST00000532285 B2MP61769 119 aa16.62■□□□□ 0.25
CAPN1-222ENST00000532285 OPCMLQ14982 345 aa16.62■□□□□ 0.25
CAPN1-222ENST00000532285 SLC35B3Q9H1N7 401 aa16.62■□□□□ 0.25
CAPN1-222ENST00000532285 HRH4Q9H3N8 390 aa16.62■□□□□ 0.25
CAPN1-222ENST00000532285 SLC39A9Q9NUM3 307 aa16.62■□□□□ 0.25
CAPN1-222ENST00000532285 LCN15Q6UWW0 184 aa16.61■□□□□ 0.25
CAPN1-222ENST00000532285 ZNF738Q8NE65 137 aa16.61■□□□□ 0.25
CAPN1-222ENST00000532285 OR5C1Q8NGR4 320 aa16.61■□□□□ 0.25
CAPN1-222ENST00000532285 PET100P0DJ07 73 aa16.6■□□□□ 0.25
CAPN1-222ENST00000532285 CXCL3P19876 107 aa16.6■□□□□ 0.25
CAPN1-222ENST00000532285 PSG3Q16557 428 aa16.6■□□□□ 0.25
CAPN1-222ENST00000532285 MORN5Q5VZ52 161 aa16.6■□□□□ 0.25
CAPN1-222ENST00000532285 ZNF705AQ6ZN79 300 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-222ENST00000532285 NEU1Q99519 415 aa16.6■□□□□ 0.25
CAPN1-222ENST00000532285 PXMP4Q9Y6I8 212 aa16.6■□□□□ 0.25
CAPN1-222ENST00000532285 ZNF705FA8MVS1 300 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-222ENST00000532285 PTTG1O95997 202 aa16.59■□□□□ 0.25
CAPN1-222ENST00000532285 ZNF705DP0CH99 300 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-222ENST00000532285 ZNF705BP0CI00 300 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-222ENST00000532285 CNN1P51911 297 aaKnown RBP16.59■□□□□ 0.25
CAPN1-222ENST00000532285 SLC50A1Q9BRV3 221 aa16.59■□□□□ 0.25
CAPN1-222ENST00000532285 RNF126Q9BV68 326 aa16.59■□□□□ 0.25
CAPN1-222ENST00000532285 NPCDR1Q9BY65 106 aa16.59■□□□□ 0.25
CAPN1-222ENST00000532285 SMIM9A6NGZ8 99 aa16.58■□□□□ 0.24
CAPN1-222ENST00000532285 MPC2O95563 127 aa16.58■□□□□ 0.24
CAPN1-222ENST00000532285 AMTNQ6UX39 209 aa16.58■□□□□ 0.24
CAPN1-222ENST00000532285 ZNF331Q9NQX6 463 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-222ENST00000532285 PLECQ15149 4684 aaKnown RBP16.58■□□□□ 0.24
CAPN1-222ENST00000532285 RYR2Q92736 4967 aa16.57■□□□□ 0.24
CAPN1-222ENST00000532285 AMBPP02760 352 aa16.57■□□□□ 0.24
CAPN1-222ENST00000532285 HLA-DMBP28068 263 aa16.57■□□□□ 0.24
CAPN1-222ENST00000532285 CLINT1Q14677 625 aa16.57■□□□□ 0.24
CAPN1-222ENST00000532285 THAP6Q8TBB0 222 aa16.57■□□□□ 0.24
CAPN1-222ENST00000532285 GOLT1BQ9Y3E0 138 aa16.57■□□□□ 0.24
CAPN1-222ENST00000532285 ALG5Q9Y673 324 aa16.57■□□□□ 0.24
CAPN1-222ENST00000532285 IGHV3OR16-12A0A075B7B8 117 aa16.56■□□□□ 0.24
CAPN1-222ENST00000532285 TRAV5A0A0B4J249 113 aa16.56■□□□□ 0.24
CAPN1-222ENST00000532285 IGLC2P0DOY2 106 aa16.56■□□□□ 0.24
CAPN1-222ENST00000532285 OR11H7Q8NGC8 314 aa16.56■□□□□ 0.24
CAPN1-222ENST00000532285 OR8A1Q8NGG7 326 aa16.56■□□□□ 0.24
CAPN1-222ENST00000532285 C11orf94C9JXX5 98 aa16.55■□□□□ 0.24
CAPN1-222ENST00000532285 SNRPCP09234 159 aaKnown RBP16.55■□□□□ 0.24
CAPN1-222ENST00000532285 GUK1Q16774 197 aa16.55■□□□□ 0.24
CAPN1-222ENST00000532285 RPUSD4Q96CM3 377 aaKnown RBP16.55■□□□□ 0.24
CAPN1-222ENST00000532285 DNAH1Q9P2D7 4330 aa16.54■□□□□ 0.24
CAPN1-222ENST00000532285 TMEM189A5PLL7 270 aa16.54■□□□□ 0.24
CAPN1-222ENST00000532285 H3BQ15 152 aa16.54■□□□□ 0.24
CAPN1-222ENST00000532285 HIST1H1AQ02539 215 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-222ENST00000532285 C1orf158Q8N1D5 194 aa16.54■□□□□ 0.24
CAPN1-222ENST00000532285 SAT2Q96F10 170 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-222ENST00000532285 IGF2BP2-AS1Q96M15 143 aa16.54■□□□□ 0.24
CAPN1-222ENST00000532285 KCNIP2Q9NS61 270 aa16.54■□□□□ 0.24
CAPN1-222ENST00000532285 HSPB11Q9Y547 144 aa16.54■□□□□ 0.24
CAPN1-222ENST00000532285 RFNGQ9Y644 331 aa16.54■□□□□ 0.24
CAPN1-222ENST00000532285 WDR61Q9GZS3 305 aaKnown RBP16.53■□□□□ 0.24
CAPN1-222ENST00000532285 MBD2Q9UBB5 411 aa16.53■□□□□ 0.24
CAPN1-222ENST00000532285 ALMS1Q8TCU4 4167 aa16.53■□□□□ 0.24
CAPN1-222ENST00000532285 H3BTX0 84 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 M0R2Z0 102 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 SLC17A3O00476 420 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 RPL12P30050 165 aaKnown RBP16.52■□□□□ 0.24
CAPN1-222ENST00000532285 RHOBP62745 196 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 SPINK13Q1W4C9 94 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 C2CD4CQ8TF44 421 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 LINC00476Q8WZB0 136 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 ATP5SQ99766 215 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 PPP1R14DQ9NXH3 145 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 TMEM14CQ9P0S9 112 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 CELA1Q9UNI1 258 aa16.52■□□□□ 0.24
CAPN1-222ENST00000532285 C17orf112F2Z3M2 114 aa16.51■□□□□ 0.23
CAPN1-222ENST00000532285 BOLA2-SMG1P6H3BVE0 249 aa16.51■□□□□ 0.23
CAPN1-222ENST00000532285 ZNF253O75346 499 aa16.51■□□□□ 0.23
CAPN1-222ENST00000532285 TMEM208Q9BTX3 173 aa16.51■□□□□ 0.23
CAPN1-222ENST00000532285 ZNF586Q9NXT0 402 aa16.51■□□□□ 0.23
CAPN1-222ENST00000532285 CRXO43186 299 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-222ENST00000532285 INSP01308 110 aa16.5■□□□□ 0.23
CAPN1-222ENST00000532285 HBE1P02100 147 aa16.5■□□□□ 0.23
CAPN1-222ENST00000532285 GCSAMLQ5JQS6 135 aa16.5■□□□□ 0.23
CAPN1-222ENST00000532285 Q6ZTC4 211 aa16.5■□□□□ 0.23
CAPN1-222ENST00000532285 TRAV10A0A0B4J240 114 aa16.49■□□□□ 0.23
CAPN1-222ENST00000532285 LY6G6CO95867 125 aa16.49■□□□□ 0.23
CAPN1-222ENST00000532285 RRN3P1Q2M238 152 aa16.49■□□□□ 0.23
CAPN1-222ENST00000532285 C12orf74Q32Q52 190 aa16.49■□□□□ 0.23
CAPN1-222ENST00000532285 MED28Q9H204 178 aa16.49■□□□□ 0.23
CAPN1-222ENST00000532285 TRBV19A0A075B6N1 114 aa16.48■□□□□ 0.23
CAPN1-222ENST00000532285 IFNA5P01569 189 aa16.48■□□□□ 0.23
CAPN1-222ENST00000532285 SPART-AS1P0CW21 52 aa16.48■□□□□ 0.23
CAPN1-222ENST00000532285 HIST1H1EP10412 219 aaKnown RBP16.48■□□□□ 0.23
CAPN1-222ENST00000532285 EMP1P54849 157 aa16.48■□□□□ 0.23
CAPN1-222ENST00000532285 TCTAP57738 103 aa16.48■□□□□ 0.23
CAPN1-222ENST00000532285 OR10J6PQ8NGY7 276 aa16.48■□□□□ 0.23
CAPN1-222ENST00000532285 PRB4P10163 310 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-222ENST00000532285 BAP18Q8IXM2 172 aa16.47■□□□□ 0.23
CAPN1-222ENST00000532285 SCGB1C1Q8TD33 95 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms