RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 DNAH11Q96DT5 4516 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 LYRM9A8MSI8 78 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 H3BRN7 92 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 M0R2Z0 102 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 CCNKO75909 580 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 DUSP14O95147 198 aaKnown RBP8.01□□□□□ -1.13
VPS28-214ENST00000531032 INSP01308 110 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 MBPP02686 304 aaPredicted RBP8.01□□□□□ -1.13
VPS28-214ENST00000531032 OR5G3P0C626 314 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 PVALBP20472 110 aaPredicted RBP8.01□□□□□ -1.13
VPS28-214ENST00000531032 TSPOP30536 169 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 CAV2P51636 162 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 FAM3BP58499 235 aaPredicted RBP8.01□□□□□ -1.13
VPS28-214ENST00000531032 SELENOTP62341 195 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 SPINK13Q1W4C9 94 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 SOHLH1Q5JUK2 328 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 TMEM14EPQ6UXP3 125 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 RNF182Q8N6D2 247 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 C15orf53Q8NAA6 179 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 HIGD1AQ9Y241 93 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 MUC4Q99102 2169 aa8.01□□□□□ -1.13
VPS28-214ENST00000531032 PLAC8L1A1L4L8 177 aa8□□□□□ -1.13
VPS28-214ENST00000531032 ZNF705GA8MUZ8 300 aaPredicted RBP8□□□□□ -1.13
VPS28-214ENST00000531032 HYPMO75409 117 aa8□□□□□ -1.13
VPS28-214ENST00000531032 PRM2P04554 102 aa8□□□□□ -1.13
VPS28-214ENST00000531032 B2MP61769 119 aa8□□□□□ -1.13
VPS28-214ENST00000531032 FGL1Q08830 312 aa8□□□□□ -1.13
VPS28-214ENST00000531032 SLC38A11Q08AI6 406 aa8□□□□□ -1.13
VPS28-214ENST00000531032 C1orf134Q5TEV5 83 aa8□□□□□ -1.13
VPS28-214ENST00000531032 IGFL4Q6B9Z1 124 aa8□□□□□ -1.13
VPS28-214ENST00000531032 TEPPQ6URK8 271 aa8□□□□□ -1.13
VPS28-214ENST00000531032 ZNF546Q86UE3 836 aa8□□□□□ -1.13
VPS28-214ENST00000531032 BAP18Q8IXM2 172 aa8□□□□□ -1.13
VPS28-214ENST00000531032 SHANK2-AS3Q9BTD1 123 aa8□□□□□ -1.13
VPS28-214ENST00000531032 SLC25A39Q9BZJ4 359 aaPredicted RBP8□□□□□ -1.13
VPS28-214ENST00000531032 GPN1Q9HCN4 374 aaPredicted RBP8□□□□□ -1.13
VPS28-214ENST00000531032 NPVFQ9HCQ7 196 aa8□□□□□ -1.13
VPS28-214ENST00000531032 RNF24Q9Y225 148 aa8□□□□□ -1.13
VPS28-214ENST00000531032 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
VPS28-214ENST00000531032 C7orf66A4D0T2 115 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 PMS2P5A8MQ11 134 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 FNDC10F2Z333 226 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 BOLA2-SMG1P6H3BVE0 249 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 K7EPK0 472 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 GOSR2O14653 212 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 UPK1BO75841 260 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 RPL7P18124 248 aaKnown RBP7.99□□□□□ -1.13
VPS28-214ENST00000531032 PLP1P60201 277 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 ASAH1Q13510 395 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 ZNF738Q8NE65 137 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 C2orf50Q96LR7 162 aa7.99□□□□□ -1.13
VPS28-214ENST00000531032 A0A087X0K7 114 aa7.98□□□□□ -1.13
VPS28-214ENST00000531032 COX7A2P2O60397 106 aa7.98□□□□□ -1.13
VPS28-214ENST00000531032 CXCL3P19876 107 aa7.98□□□□□ -1.13
VPS28-214ENST00000531032 RAB31Q13636 194 aa7.98□□□□□ -1.13
VPS28-214ENST00000531032 ZNF575Q86XF7 245 aa7.98□□□□□ -1.13
VPS28-214ENST00000531032 STX12Q86Y82 276 aa7.98□□□□□ -1.13
VPS28-214ENST00000531032 LRRC20Q8TCA0 184 aa7.98□□□□□ -1.13
VPS28-214ENST00000531032 GGACTQ9BVM4 153 aa7.98□□□□□ -1.13
VPS28-214ENST00000531032 ARL6Q9H0F7 186 aa7.98□□□□□ -1.13
VPS28-214ENST00000531032 TRAV12-2A0A075B6T6 113 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 CST7O76096 145 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 DEFB130BP0DP73 79 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 DEFB130AP0DP74 79 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 AZU1P20160 251 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 TMEM256Q8N2U0 113 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 OR8A1Q8NGG7 326 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 UHRF2Q96PU4 802 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 ATG101Q9BSB4 218 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 ARV1Q9H2C2 271 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 RYR1P21817 5038 aa7.97□□□□□ -1.13
VPS28-214ENST00000531032 UBE2L5PA0A1B0GUS4 154 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 FAM24AA6NFZ4 105 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 F5H768 121 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 AGPAT2O15120 278 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 TAS2R60P59551 318 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 DEFA1P59665 94 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 DEFA3P59666 94 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 HBG1P69891 147 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 HBG2P69892 147 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 HIST1H1AQ02539 215 aaPredicted RBP7.96□□□□□ -1.14
VPS28-214ENST00000531032 BAXQ07812 192 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 ARL16Q0P5N6 197 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 RAB32Q13637 225 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 PSG3Q16557 428 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 PXDC1Q5TGL8 231 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 ZNRF2Q8NHG8 242 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 UQCC1Q9NVA1 299 aa7.96□□□□□ -1.14
VPS28-214ENST00000531032 NBDYA0A0U1RRE5 68 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 CBY3A6NI87 242 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 MRPS12O15235 138 aaKnown RBP7.95□□□□□ -1.14
VPS28-214ENST00000531032 PRAF2O60831 178 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 ATP5G1P05496 136 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 CXCL2P19875 107 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 ATP5G3P48201 142 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 CAMLGP49069 296 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 RHOBP62745 196 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 FCN2Q15485 313 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 PATE2Q6UY27 113 aa7.95□□□□□ -1.14
VPS28-214ENST00000531032 Q6ZRG5 221 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms