RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 IL36BQ9NZH7 164 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 ZFP30Q9Y2G7 519 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 MPC1Q9Y5U8 109 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 KIAA1549Q9HCM3 1950 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 DNAH12Q6ZR08 3092 aa3.01□□□□□ -1.93
USP47-209ENST00000530041 CHD3Q12873 2000 aaKnown RBP3□□□□□ -1.93
USP47-209ENST00000530041 TRBV20OR9-2A0A075B6H5 130 aa3□□□□□ -1.93
USP47-209ENST00000530041 TRGV10A0A0A0MS01 117 aa3□□□□□ -1.93
USP47-209ENST00000530041 MDFIC2A0A1B0GVS7 189 aa3□□□□□ -1.93
USP47-209ENST00000530041 ODAMA1E959 279 aa3□□□□□ -1.93
USP47-209ENST00000530041 C9JCJ5 164 aa3□□□□□ -1.93
USP47-209ENST00000530041 K7EP13 123 aa3□□□□□ -1.93
USP47-209ENST00000530041 CDIPTO14735 213 aa3□□□□□ -1.93
USP47-209ENST00000530041 SERF1AO75920 110 aa3□□□□□ -1.93
USP47-209ENST00000530041 GPX1P07203 203 aa3□□□□□ -1.93
USP47-209ENST00000530041 COX6A1P12074 109 aa3□□□□□ -1.93
USP47-209ENST00000530041 CRISP2P16562 243 aa3□□□□□ -1.93
USP47-209ENST00000530041 LOXP28300 417 aaPredicted RBP3□□□□□ -1.93
USP47-209ENST00000530041 PFN2P35080 140 aa3□□□□□ -1.93
USP47-209ENST00000530041 OPRK1P41145 380 aa3□□□□□ -1.93
USP47-209ENST00000530041 ATP5G3P48201 142 aa3□□□□□ -1.93
USP47-209ENST00000530041 KLF3P57682 345 aaPredicted RBP3□□□□□ -1.93
USP47-209ENST00000530041 RPL30P62888 115 aaKnown RBP3□□□□□ -1.93
USP47-209ENST00000530041 GNG3P63215 75 aa3□□□□□ -1.93
USP47-209ENST00000530041 TDRG1Q3Y452 100 aa3□□□□□ -1.93
USP47-209ENST00000530041 OR10J3Q5JRS4 329 aa3□□□□□ -1.93
USP47-209ENST00000530041 TOMM20LQ6UXN7 152 aa3□□□□□ -1.93
USP47-209ENST00000530041 Q6ZT83 130 aa3□□□□□ -1.93
USP47-209ENST00000530041 Q8IYB0 196 aa3□□□□□ -1.93
USP47-209ENST00000530041 DEFB119Q8N690 84 aa3□□□□□ -1.93
USP47-209ENST00000530041 ZNF645Q8N7E2 425 aa3□□□□□ -1.93
USP47-209ENST00000530041 ZNF709Q8N972 641 aa3□□□□□ -1.93
USP47-209ENST00000530041 NKAPP1Q8N9T2 125 aa3□□□□□ -1.93
USP47-209ENST00000530041 OR1N2Q8NGR9 330 aa3□□□□□ -1.93
USP47-209ENST00000530041 OR1L1Q8NH94 360 aa3□□□□□ -1.93
USP47-209ENST00000530041 SGMS2Q8NHU3 365 aa3□□□□□ -1.93
USP47-209ENST00000530041 NEK7Q8TDX7 302 aa3□□□□□ -1.93
USP47-209ENST00000530041 DTD1Q8TEA8 209 aa3□□□□□ -1.93
USP47-209ENST00000530041 ZNF488Q96MN9 340 aa3□□□□□ -1.93
USP47-209ENST00000530041 HSPB9Q9BQS6 159 aa3□□□□□ -1.93
USP47-209ENST00000530041 VAMP8Q9BV40 100 aa3□□□□□ -1.93
USP47-209ENST00000530041 SFXN3Q9BWM7 321 aa3□□□□□ -1.93
USP47-209ENST00000530041 GNB1LQ9BYB4 327 aa3□□□□□ -1.93
USP47-209ENST00000530041 ZDHHC11Q9H8X9 412 aa3□□□□□ -1.93
USP47-209ENST00000530041 ARL2-SNX15V9GYD0 113 aa3□□□□□ -1.93
USP47-209ENST00000530041 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 IGHV2OR16-5A0A0B4J2B6 119 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 IGHV5-10-1A0A0J9YXX1 117 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 C20orf202A1L168 122 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 C17orf98A8MV24 154 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 HMGB3O15347 200 aaKnown RBP2.99□□□□□ -1.93
USP47-209ENST00000530041 HYPMO75409 117 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 CXorf1O96002 111 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 IGHV3-48P01763 117 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 MT-ND6P03923 174 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 OR5AL1P0C617 328 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 IGLC2P0DOY2 106 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 IGLC3P0DOY3 106 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 COX7A1P24310 79 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 GCHFRP30047 84 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 RPS20P60866 119 aaKnown RBP2.99□□□□□ -1.93
USP47-209ENST00000530041 RBX1P62877 108 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 PSG7Q13046 419 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 CATR1Q13166 79 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 KIAA0087Q14695 138 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 PSG5Q15238 335 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 IGFBP7Q16270 282 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 HLA-DRB5Q30154 266 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 TIMM23BQ5SRD1 257 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 TMEM136Q6ZRR5 245 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 TCF23Q7RTU1 214 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 OR5T1Q8NG75 326 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 OR10W1Q8NGF6 305 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 OR2D3Q8NGH3 330 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 OR10J6PQ8NGY7 276 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 OR10D3Q8NH80 312 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 LRRC29Q8WV35 223 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 SLC35E1Q96K37 410 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 RASL11BQ9BPW5 248 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 DERL1Q9BUN8 251 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 HES4Q9HCC6 221 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 OSTCQ9NRP0 149 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 ZNF586Q9NXT0 402 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 UQCR10Q9UDW1 63 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 MRPS16Q9Y3D3 137 aaKnown RBP2.99□□□□□ -1.93
USP47-209ENST00000530041 U3KQA8 63 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 V9GYV3 84 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 EML6Q6ZMW3 1958 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 UNC13CQ8NB66 2214 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 ASXL3Q9C0F0 2248 aa2.99□□□□□ -1.93
USP47-209ENST00000530041 MED12Q93074 2177 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 KNL1Q8NG31 2342 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 YLPM1P49750 1951 aaKnown RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 CEP350Q5VT06 3117 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 IGHV2-26A0A0B4J1V2 119 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 A0A0G2JMM0 328 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 FAM240AA0A1B0GVK7 77 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 A0A1W2PPB8 328 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 A0A1W2PRS3 328 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 TMEM30CPA0ZSE6 113 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms