RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CTSDP07339 412 aaPredicted RBP2.04□□□□□ -2.08
C11orf88-204ENST00000529661 RAB5CP51148 216 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 SELENOWP63302 87 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 NNATQ16517 81 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 TMEM155Q4W5P6 130 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 TNS3Q68CZ2 1445 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 ZNF518AQ6AHZ1 1483 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 AAED1Q7RTV5 226 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 TEX29Q8N6K0 151 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 BRK1Q8WUW1 75 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 DIRC1Q969H9 104 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 AP1S3Q96PC3 154 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 BCL2L10Q9HD36 194 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 NDUFB11Q9NX14 153 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 SCN3AQ9NY46 2000 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 DSPPQ9NZW4 1301 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 MYO9BQ13459 2157 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 COL5A1P20908 1838 aaPredicted RBP2.03□□□□□ -2.08
C11orf88-204ENST00000529661 FAM135BQ49AJ0 1406 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 SMG6Q86US8 1419 aaKnown RBP2.03□□□□□ -2.08
C11orf88-204ENST00000529661 KIAA1107Q9UPP5 1409 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 A0A1B0GVG6 124 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 J3QR89 54 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 ZNF705BP0CI00 300 aaPredicted RBP2.03□□□□□ -2.08
C11orf88-204ENST00000529661 CRYGSP22914 178 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 RRAS2P62070 204 aaPredicted RBP2.03□□□□□ -2.08
C11orf88-204ENST00000529661 RPS25P62851 125 aaKnown RBP2.03□□□□□ -2.08
C11orf88-204ENST00000529661 QRFPP83859 136 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 KLRD1Q13241 179 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 WHAMMP3Q1A5X7 153 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 ZNF826PQ6ZT77 177 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 MMGT1Q8N4V1 131 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 MORN4Q8NDC4 146 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 WFDC11Q8NEX6 87 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 OR4B1Q8NGF8 309 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 OR5H6Q8NGV6 325 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 PRELID3AQ96N28 172 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 TAF9BQ9HBM6 251 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 TAS2R4Q9NYW5 299 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 PRO2289Q9P1D8 64 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 MPDZO75970 2070 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 ATG2AQ2TAZ0 1938 aa2.03□□□□□ -2.08
C11orf88-204ENST00000529661 DLC1Q96QB1 1528 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 FAM135AQ9P2D6 1515 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 MICAL3Q7RTP6 2002 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 KIAA1549Q9HCM3 1950 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 J3QRE1 110 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 GPX1P07203 203 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 TRGC1P0CF51 173 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 IGLC6P0CF74 106 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 TMEM258P61165 79 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 RELAQ04206 551 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 ESRGQ1W209 222 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 ZNF791Q3KP31 576 aaPredicted RBP2.02□□□□□ -2.09
C11orf88-204ENST00000529661 SPANXN5Q5MJ07 72 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 ZNF418Q8TF45 676 aaPredicted RBP2.02□□□□□ -2.09
C11orf88-204ENST00000529661 ARL11Q969Q4 196 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 TMEM203Q969S6 136 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 TP53RKQ96S44 253 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 LINC00470Q9BZP3 86 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 LPAR5Q9H1C0 372 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 PLXNA4Q9HCM2 1894 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 COL11A1P12107 1806 aaPredicted RBP2.02□□□□□ -2.09
C11orf88-204ENST00000529661 ADAMTS7Q9UKP4 1686 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 KDM5CP41229 1560 aa2.02□□□□□ -2.09
C11orf88-204ENST00000529661 BCL9LQ86UU0 1499 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 PTPRGP23470 1445 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 TMSB15BA0A087X1C1 80 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 FAM92AA1XBS5 289 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 OR2T8A6NH00 312 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 HMSDA8MTL9 139 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 ZNF727A8MUV8 499 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 F8W036 122 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 UQCRQO14949 82 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 OR1I1O60431 355 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 SMIM24O75264 130 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 PMP2P02689 132 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 MT-ND6P03923 174 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 BAALC-AS2P0C853 105 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 PEBP1P30086 187 aaKnown RBP2.01□□□□□ -2.09
C11orf88-204ENST00000529661 FOXA3P55318 350 aaPredicted RBP2.01□□□□□ -2.09
C11orf88-204ENST00000529661 MRPS36P82909 103 aaKnown RBP2.01□□□□□ -2.09
C11orf88-204ENST00000529661 ERHP84090 104 aaKnown RBP2.01□□□□□ -2.09
C11orf88-204ENST00000529661 ZNF345Q14585 488 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 ZNF181Q2M3W8 571 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 HSD17B12Q53GQ0 312 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 CTAGE3PQ8IX95 158 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 FAM216BQ8N7L0 139 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 OR8B3Q8NGG8 313 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 OR10AC1Q8NH08 325 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 CCL26Q9Y258 94 aa2.01□□□□□ -2.09
C11orf88-204ENST00000529661 DIDO1Q9BTC0 2240 aaKnown RBP2.01□□□□□ -2.09
C11orf88-204ENST00000529661 IGKV1D-42A0A075B6H8 117 aa2□□□□□ -2.09
C11orf88-204ENST00000529661 C17orf112F2Z3M2 114 aa2□□□□□ -2.09
C11orf88-204ENST00000529661 K7ERU9 68 aa2□□□□□ -2.09
C11orf88-204ENST00000529661 TCRAP04437 139 aa2□□□□□ -2.09
C11orf88-204ENST00000529661 LINC00694P0DN24 101 aa2□□□□□ -2.09
C11orf88-204ENST00000529661 CSRP1P21291 193 aaKnown RBP2□□□□□ -2.09
C11orf88-204ENST00000529661 MAXP61244 160 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms