RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 ZNF709Q8N972 641 aa11.72□□□□□ -0.53
TSPAN4-218ENST00000529566 SAT2Q96F10 170 aaPredicted RBP11.72□□□□□ -0.53
TSPAN4-218ENST00000529566 SMIM3Q9BZL3 60 aa11.72□□□□□ -0.53
TSPAN4-218ENST00000529566 HRH4Q9H3N8 390 aa11.72□□□□□ -0.53
TSPAN4-218ENST00000529566 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
TSPAN4-218ENST00000529566 ZNF705EA8MWA4 302 aaPredicted RBP11.71□□□□□ -0.53
TSPAN4-218ENST00000529566 IGKV3-20P01619 116 aa11.71□□□□□ -0.53
TSPAN4-218ENST00000529566 CXCL2P19875 107 aa11.71□□□□□ -0.53
TSPAN4-218ENST00000529566 EBLN2Q6P2I7 272 aa11.71□□□□□ -0.53
TSPAN4-218ENST00000529566 PARD6GQ9BYG4 376 aaPredicted RBP11.71□□□□□ -0.53
TSPAN4-218ENST00000529566 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.53
TSPAN4-218ENST00000529566 XCL2Q9UBD3 114 aa11.71□□□□□ -0.53
TSPAN4-218ENST00000529566 DYNC2H1Q8NCM8 4307 aaKnown RBP11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 G3V3Q6 166 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 SLC17A3O00476 420 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 NUTF2P61970 127 aaKnown RBP11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 PSG3Q16557 428 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 ZFAND6Q6FIF0 208 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 LCN15Q6UWW0 184 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 AMTNQ6UX39 209 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 IL17DQ8TAD2 202 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 FAM167A-AS1Q96KT0 104 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 AQP10Q96PS8 301 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 ZNF586Q9NXT0 402 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 TMEM14CQ9P0S9 112 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 X6R8D5 127 aa11.7□□□□□ -0.54
TSPAN4-218ENST00000529566 H3BTX0 84 aa11.69□□□□□ -0.54
TSPAN4-218ENST00000529566 PSG9Q00887 426 aa11.69□□□□□ -0.54
TSPAN4-218ENST00000529566 Q8NAQ8 132 aa11.69□□□□□ -0.54
TSPAN4-218ENST00000529566 OR4B1Q8NGF8 309 aa11.69□□□□□ -0.54
TSPAN4-218ENST00000529566 SLC25A2Q9BXI2 301 aa11.69□□□□□ -0.54
TSPAN4-218ENST00000529566 SLC35B3Q9H1N7 401 aa11.69□□□□□ -0.54
TSPAN4-218ENST00000529566 KCNIP2Q9NS61 270 aa11.69□□□□□ -0.54
TSPAN4-218ENST00000529566 RFNGQ9Y644 331 aa11.69□□□□□ -0.54
TSPAN4-218ENST00000529566 C17orf112F2Z3M2 114 aa11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 IFNA5P01569 189 aa11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 ZNF705DP0CH99 300 aaPredicted RBP11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 ZNF705BP0CI00 300 aaPredicted RBP11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 CNN1P51911 297 aaKnown RBP11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 FXYD7P58549 80 aa11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 MIR17HGQ75NE6 70 aa11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 ZNF738Q8NE65 137 aa11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 LRRC20Q8TCA0 184 aa11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 SLC50A1Q9BRV3 221 aa11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 C1QTNF4Q9BXJ3 329 aa11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 C11orf68Q9H3H3 251 aaKnown RBP11.68□□□□□ -0.54
TSPAN4-218ENST00000529566 RBMY1A1P0DJD3 496 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-218ENST00000529566 RBMY1CP0DJD4 496 aa11.67□□□□□ -0.54
TSPAN4-218ENST00000529566 PRB4P10163 310 aaPredicted RBP11.67□□□□□ -0.54
TSPAN4-218ENST00000529566 RBMY1FQ15415 496 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-218ENST00000529566 GUK1Q16774 197 aa11.67□□□□□ -0.54
TSPAN4-218ENST00000529566 ZNF705AQ6ZN79 300 aaPredicted RBP11.67□□□□□ -0.54
TSPAN4-218ENST00000529566 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
TSPAN4-218ENST00000529566 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
TSPAN4-218ENST00000529566 SCGB1C1Q8TD33 95 aa11.67□□□□□ -0.54
TSPAN4-218ENST00000529566 TENM2Q9NT68 2774 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 TRBV19A0A075B6N1 114 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 DEFB4AO15263 64 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 ZNF253O75346 499 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 DUSP14O95147 198 aaKnown RBP11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 NDUFB4O95168 129 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 PYYP10082 97 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 HIST1H1EP10412 219 aaKnown RBP11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 FFAR4Q5NUL3 377 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 RPUSD4Q96CM3 377 aaKnown RBP11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 TNFSF18Q9UNG2 199 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 LYSTQ99698 3801 aa11.66□□□□□ -0.54
TSPAN4-218ENST00000529566 IGHV4-28A0A0C4DH34 117 aa11.65□□□□□ -0.54
TSPAN4-218ENST00000529566 PRAC2D3DTV9 90 aa11.65□□□□□ -0.54
TSPAN4-218ENST00000529566 MIFP14174 115 aa11.65□□□□□ -0.54
TSPAN4-218ENST00000529566 MRPL32Q9BYC8 188 aaKnown RBP11.65□□□□□ -0.54
TSPAN4-218ENST00000529566 MFFQ9GZY8 342 aa11.65□□□□□ -0.54
TSPAN4-218ENST00000529566 FUT9Q9Y231 359 aa11.65□□□□□ -0.54
TSPAN4-218ENST00000529566 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
TSPAN4-218ENST00000529566 C1orf158Q8N1D5 194 aa11.64□□□□□ -0.55
TSPAN4-218ENST00000529566 ZNF503Q96F45 646 aa11.64□□□□□ -0.55
TSPAN4-218ENST00000529566 NEU1Q99519 415 aa11.64□□□□□ -0.55
TSPAN4-218ENST00000529566 TIMM9Q9Y5J7 89 aa11.64□□□□□ -0.55
TSPAN4-218ENST00000529566 PLECQ15149 4684 aaKnown RBP11.64□□□□□ -0.55
TSPAN4-218ENST00000529566 RYR3Q15413 4870 aa11.63□□□□□ -0.55
TSPAN4-218ENST00000529566 SACSQ9NZJ4 4579 aa11.63□□□□□ -0.55
TSPAN4-218ENST00000529566 FXYD6-FXYD2A0A087WZ82 144 aa11.63□□□□□ -0.55
TSPAN4-218ENST00000529566 HIST1H1AQ02539 215 aaPredicted RBP11.63□□□□□ -0.55
TSPAN4-218ENST00000529566 PDE6HQ13956 83 aa11.63□□□□□ -0.55
TSPAN4-218ENST00000529566 INO80EQ8NBZ0 244 aaPredicted RBP11.63□□□□□ -0.55
TSPAN4-218ENST00000529566 FXYD5Q96DB9 178 aa11.63□□□□□ -0.55
TSPAN4-218ENST00000529566 OR51M1Q9H341 326 aa11.63□□□□□ -0.55
TSPAN4-218ENST00000529566 M0R2Z0 102 aa11.62□□□□□ -0.55
TSPAN4-218ENST00000529566 ZNF266Q14584 549 aa11.62□□□□□ -0.55
TSPAN4-218ENST00000529566 MRPL53Q96EL3 112 aaKnown RBP11.62□□□□□ -0.55
TSPAN4-218ENST00000529566 IGF2BP2-AS1Q96M15 143 aa11.62□□□□□ -0.55
TSPAN4-218ENST00000529566 PAXXQ9BUH6 204 aa11.62□□□□□ -0.55
TSPAN4-218ENST00000529566 SMLR1H3BR10 107 aa11.61□□□□□ -0.55
TSPAN4-218ENST00000529566 NBEAP1P0C6P0 100 aa11.61□□□□□ -0.55
TSPAN4-218ENST00000529566 M6PRP20645 277 aa11.61□□□□□ -0.55
TSPAN4-218ENST00000529566 NANOS2P60321 138 aaKnown RBP11.61□□□□□ -0.55
TSPAN4-218ENST00000529566 RHOBP62745 196 aa11.61□□□□□ -0.55
TSPAN4-218ENST00000529566 SPINK13Q1W4C9 94 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms