RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 IGKV3-20P01619 116 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 RNASE4P34096 147 aaKnown RBP5.89□□□□□ -1.47
CTNND1-218ENST00000528232 LAGE3Q14657 143 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 ZNF672Q499Z4 452 aaPredicted RBP5.89□□□□□ -1.47
CTNND1-218ENST00000528232 SLC25A39Q9BZJ4 359 aaPredicted RBP5.89□□□□□ -1.47
CTNND1-218ENST00000528232 RNASE7Q9H1E1 156 aaKnown RBP5.89□□□□□ -1.47
CTNND1-218ENST00000528232 ALPK2Q86TB3 2170 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 H0YJW9 148 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 PYYP10082 97 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 C20orf204Q6ZNR8 217 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 ANKRD29Q8N6D5 301 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 MBNL3Q9NUK0 354 aaKnown RBP5.89□□□□□ -1.47
CTNND1-218ENST00000528232 CRIM1Q9NZV1 1036 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 KIAA1549LQ6ZVL6 1849 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 DOPEY2Q9Y3R5 2298 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 OOSP1A8MZH6 123 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 VWC2LB2RUY7 222 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 SFTA2Q6UW10 78 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 DPH3P1Q9H4G8 78 aa5.89□□□□□ -1.47
CTNND1-218ENST00000528232 IGHV1-3A0A0C4DH29 117 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 IGHV3-66A0A0C4DH42 116 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 LYNX1G3V0Z9 82 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 LYNX1P0DP58 116 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 NUP35Q8NFH5 326 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 SPATA25Q9BR10 227 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 PLA2G2CQ5R387 149 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 ZNF474Q6S9Z5 364 aaPredicted RBP5.88□□□□□ -1.47
CTNND1-218ENST00000528232 C8orf86Q6ZUL3 223 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 C5orf24Q7Z6I8 188 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 TRGV9Q99603 122 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 C7orf69Q9H7B7 122 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 IGLV3-1P01715 115 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 LMO1P25800 156 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 SPATA31B1PQ5VZV4 182 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 Q6ZWC4 215 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 MRAPQ8TCY5 172 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 M0R1W7 72 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 HERV-K104P63124 156 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 MINOS1Q5TGZ0 78 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 RNF166Q96A37 237 aaPredicted RBP5.88□□□□□ -1.47
CTNND1-218ENST00000528232 MINOS1-NBL1R4GNA1 71 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 IGHV3OR16-13A0A075B7E8 117 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 IGHV3-74A0A0B4J1X5 117 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 TRAV3A0A0B4J244 114 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 KNCNA6PVL3 124 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 FABP5P3A8MUU1 101 aa5.88□□□□□ -1.47
CTNND1-218ENST00000528232 LRRK1Q38SD2 2015 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 RBMY1FQ15415 496 aaKnown RBP5.87□□□□□ -1.47
CTNND1-218ENST00000528232 RPP25LQ8N5L8 163 aaKnown RBP5.87□□□□□ -1.47
CTNND1-218ENST00000528232 IGKV1-6A0A0C4DH72 117 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 A0A0G2JRQ6 117 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 C15orf62A8K5M9 175 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 CRPP02741 224 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 MRPL23Q16540 153 aaKnown RBP5.87□□□□□ -1.47
CTNND1-218ENST00000528232 VMO1Q7Z5L0 202 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 TMEM86BQ8N661 226 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 Q8TCH9 128 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 HAX1O00165 279 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 SOCS3O14543 225 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 CEP290O15078 2479 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 EFNA4P52798 201 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 LCN12Q6JVE5 192 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 IGFL3Q6UXB1 125 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 JMJD8Q96S16 334 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 LINC01587Q99440 93 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 PSG8Q9UQ74 426 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 H3BMG7 143 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 HLA-DMBP28068 263 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 PRB3Q04118 309 aaPredicted RBP5.87□□□□□ -1.47
CTNND1-218ENST00000528232 MRPL55Q7Z7F7 128 aaKnown RBP5.87□□□□□ -1.47
CTNND1-218ENST00000528232 DMRTC2Q8IXT2 367 aaPredicted RBP5.87□□□□□ -1.47
CTNND1-218ENST00000528232 C15orf53Q8NAA6 179 aa5.87□□□□□ -1.47
CTNND1-218ENST00000528232 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
CTNND1-218ENST00000528232 COL4A4P53420 1690 aaPredicted RBP5.87□□□□□ -1.47
CTNND1-218ENST00000528232 IGHV3-49A0A0A0MS15 119 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 A0A1W2PPI3 338 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 SYNJ2BPP57105 145 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 NPC2P61916 151 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 HS3ST6Q96QI5 342 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 TRIOBPQ9H2D6 2365 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 IGKV3D-20A0A0C4DH25 116 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 CD28P10747 220 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 GATA4P43694 442 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 DSCR9P59020 149 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 CEND1Q8N111 149 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 RNF138Q8WVD3 245 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 C2orf16Q68DN1 1984 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 HEATR5AQ86XA9 2040 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 BUB1B-PAK6H3BSN5 160 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 PF4P02776 101 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 IGLC1P0CG04 106 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 IGLL1P15814 213 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 SHISA9B4DS77 424 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 NTF4P34130 210 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 GTSCR1Q86UQ5 136 aa5.86□□□□□ -1.47
CTNND1-218ENST00000528232 ITLN2Q8WWU7 325 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-218ENST00000528232 WNT2P09544 360 aa5.85□□□□□ -1.47
CTNND1-218ENST00000528232 Q6ZRM9 215 aa5.85□□□□□ -1.47
CTNND1-218ENST00000528232 SRSF8Q9BRL6 282 aaKnown RBP5.85□□□□□ -1.47
CTNND1-218ENST00000528232 ZNF492Q9P255 531 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms