RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 FCGR2BP31994 310 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-214ENST00000528165 MRPL51Q4U2R6 128 aaKnown RBP11.6□□□□□ -0.55
CAPN1-214ENST00000528165 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
CAPN1-214ENST00000528165 WFDC3Q8IUB2 231 aa11.6□□□□□ -0.55
CAPN1-214ENST00000528165 CKS2P33552 79 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 DHRS13Q6UX07 377 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 C8orf31Q8N9H6 132 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 C8orf49Q96NF6 230 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 GOSR1O95249 250 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 FXYD2P54710 66 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 PAX8Q06710 450 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 ZNF474Q6S9Z5 364 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-214ENST00000528165 LYPD1Q8N2G4 141 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 FDCSPQ8NFU4 85 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 AZU1P20160 251 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 SIGMAR1Q99720 223 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 SHANK2-AS3Q9BTD1 123 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 GTSF1LQ9H1H1 148 aa11.59□□□□□ -0.55
CAPN1-214ENST00000528165 NPYP01303 97 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 SEM1Q6ZVN7 128 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 C1orf210Q8IVY1 113 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 TNFRSF14Q92956 283 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 C18orf15Q96N68 181 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 TRAV17A0A0B4J275 112 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 SMKR1H3BMG3 65 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 M0R3E3 92 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 SCGB1A1P11684 91 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 CNTFRP26992 372 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 C3orf36Q3SXR2 165 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 PSMG4Q5JS54 123 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 VGLL1Q99990 258 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 ARRDC1-AS1Q9H2J1 176 aa11.58□□□□□ -0.56
CAPN1-214ENST00000528165 NDUFB3O43676 98 aa11.57□□□□□ -0.56
CAPN1-214ENST00000528165 FCN3O75636 299 aa11.57□□□□□ -0.56
CAPN1-214ENST00000528165 CHAC1Q9BUX1 264 aa11.57□□□□□ -0.56
CAPN1-214ENST00000528165 HIGD1BQ9P298 99 aa11.57□□□□□ -0.56
CAPN1-214ENST00000528165 SIGLEC9Q9Y336 463 aa11.57□□□□□ -0.56
CAPN1-214ENST00000528165 MBD3L4A6NDZ8 208 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-214ENST00000528165 MBD3L3A6NE82 208 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-214ENST00000528165 FBLL1A6NHQ2 334 aaKnown RBP11.57□□□□□ -0.56
CAPN1-214ENST00000528165 MBD3L5A6NJ08 208 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-214ENST00000528165 C19orf67A6NJJ6 358 aa11.57□□□□□ -0.56
CAPN1-214ENST00000528165 K7EM74 188 aa11.57□□□□□ -0.56
CAPN1-214ENST00000528165 K7ERJ3 54 aa11.57□□□□□ -0.56
CAPN1-214ENST00000528165 SMAGPQ0VAQ4 97 aa11.57□□□□□ -0.56
CAPN1-214ENST00000528165 MBD3L2Q8NHZ7 208 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-214ENST00000528165 ZDBF2Q9HCK1 2354 aa11.56□□□□□ -0.56
CAPN1-214ENST00000528165 SH2D1AO60880 128 aa11.56□□□□□ -0.56
CAPN1-214ENST00000528165 FTH1P19P0C7X4 201 aa11.56□□□□□ -0.56
CAPN1-214ENST00000528165 PIFOQ8TCI5 191 aa11.56□□□□□ -0.56
CAPN1-214ENST00000528165 IGKV2D-26A0A0A0MRZ7 120 aa11.56□□□□□ -0.56
CAPN1-214ENST00000528165 H3BRN7 92 aa11.56□□□□□ -0.56
CAPN1-214ENST00000528165 IGKV1-17P01599 117 aa11.56□□□□□ -0.56
CAPN1-214ENST00000528165 WT1P19544 449 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-214ENST00000528165 TWIST1Q15672 202 aa11.56□□□□□ -0.56
CAPN1-214ENST00000528165 PPIAL4EA0A075B759 164 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 WI2-2373I1.2A0A1W2PRP0 233 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 TEX22C9J3V5 150 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 I3L2K1 104 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 PPIAL4FP0DN26 164 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 TTTY13Q9BZ97 58 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 AAMDCQ9H7C9 122 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 J3QR89 54 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 CRYGBP07316 175 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 PPP1R27Q86WC6 154 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 NHP2Q9NX24 153 aaKnown RBP11.55□□□□□ -0.56
CAPN1-214ENST00000528165 MAP1LC3AQ9H492 121 aa11.55□□□□□ -0.56
CAPN1-214ENST00000528165 SHISA9B4DS77 424 aa11.54□□□□□ -0.56
CAPN1-214ENST00000528165 PRSS1P07477 247 aa11.54□□□□□ -0.56
CAPN1-214ENST00000528165 CD40P25942 277 aa11.54□□□□□ -0.56
CAPN1-214ENST00000528165 PLGLAQ15195 96 aa11.54□□□□□ -0.56
CAPN1-214ENST00000528165 CD300EQ496F6 205 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-214ENST00000528165 LYPD2Q6UXB3 125 aa11.54□□□□□ -0.56
CAPN1-214ENST00000528165 TSSC4Q9Y5U2 329 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-214ENST00000528165 ODF1Q14990 250 aa11.54□□□□□ -0.56
CAPN1-214ENST00000528165 GAGE12HA6NDE8 117 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
CAPN1-214ENST00000528165 IL4P05112 153 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 IGHV1-8P0DP01 117 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 CD59P13987 128 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 LEPP41159 167 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 PHLDA1Q8WV24 401 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-214ENST00000528165 CCL17Q92583 94 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 RNF125Q96EQ8 232 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 HHLA3Q9XRX5 114 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 TRBV25-1A0A075B6N4 114 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 C17orf100A8MU93 164 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 F8W1H4 67 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 NDUFS8O00217 210 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 IGKCP01834 107 aa11.53□□□□□ -0.56
CAPN1-214ENST00000528165 GPR179Q6PRD1 2367 aa11.52□□□□□ -0.56
CAPN1-214ENST00000528165 A0A1B0GV72 72 aa11.52□□□□□ -0.56
CAPN1-214ENST00000528165 ZNF562Q6V9R5 426 aa11.52□□□□□ -0.56
CAPN1-214ENST00000528165 CEND1Q8N111 149 aa11.52□□□□□ -0.56
CAPN1-214ENST00000528165 FBXL15Q9H469 300 aa11.52□□□□□ -0.56
CAPN1-214ENST00000528165 ZMAT4Q9H898 229 aa11.52□□□□□ -0.56
CAPN1-214ENST00000528165 TMEM178BH3BS89 294 aa11.52□□□□□ -0.57
CAPN1-214ENST00000528165 THBDP07204 575 aa11.52□□□□□ -0.57
CAPN1-214ENST00000528165 LOXP28300 417 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-214ENST00000528165 FCER1GP30273 86 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms