RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 VPS13DQ5THJ4 4388 aa13.89□□□□□ -0.19
PKP3-204ENST00000526971 DNAH6Q9C0G6 4158 aa13.88□□□□□ -0.19
PKP3-204ENST00000526971 RPL12P30050 165 aaKnown RBP13.88□□□□□ -0.19
PKP3-204ENST00000526971 NUTF2P61970 127 aaKnown RBP13.88□□□□□ -0.19
PKP3-204ENST00000526971 MORN5Q5VZ52 161 aa13.88□□□□□ -0.19
PKP3-204ENST00000526971 CEMP1Q6PRD7 247 aaPredicted RBP13.88□□□□□ -0.19
PKP3-204ENST00000526971 OR11H2Q8NH07 326 aa13.88□□□□□ -0.19
PKP3-204ENST00000526971 PFDN5Q99471 154 aa13.88□□□□□ -0.19
PKP3-204ENST00000526971 HSPB11Q9Y547 144 aa13.88□□□□□ -0.19
PKP3-204ENST00000526971 OXA1LQ15070 435 aa13.87□□□□□ -0.19
PKP3-204ENST00000526971 IGFL4Q6B9Z1 124 aa13.87□□□□□ -0.19
PKP3-204ENST00000526971 EBLN2Q6P2I7 272 aa13.87□□□□□ -0.19
PKP3-204ENST00000526971 BPIFA4PQ86YQ2 179 aa13.87□□□□□ -0.19
PKP3-204ENST00000526971 CLUHP3Q96NS8 147 aa13.87□□□□□ -0.19
PKP3-204ENST00000526971 WDR61Q9GZS3 305 aaKnown RBP13.87□□□□□ -0.19
PKP3-204ENST00000526971 A0A0J9YX75 114 aa13.86□□□□□ -0.19
PKP3-204ENST00000526971 F6UB75 175 aa13.86□□□□□ -0.19
PKP3-204ENST00000526971 RNF182Q8N6D2 247 aa13.86□□□□□ -0.19
PKP3-204ENST00000526971 CSNK1G2-AS1Q8NCQ2 148 aa13.86□□□□□ -0.19
PKP3-204ENST00000526971 ATP5SQ99766 215 aa13.86□□□□□ -0.19
PKP3-204ENST00000526971 TRAV5A0A0B4J249 113 aa13.85□□□□□ -0.19
PKP3-204ENST00000526971 IGKV3-20P01619 116 aa13.85□□□□□ -0.19
PKP3-204ENST00000526971 OR4B1Q8NGF8 309 aa13.85□□□□□ -0.19
PKP3-204ENST00000526971 LRRC20Q8TCA0 184 aa13.85□□□□□ -0.19
PKP3-204ENST00000526971 C1QTNF4Q9BXJ3 329 aa13.85□□□□□ -0.19
PKP3-204ENST00000526971 CLEC5AQ9NY25 188 aa13.85□□□□□ -0.19
PKP3-204ENST00000526971 CXCL2P19875 107 aa13.84□□□□□ -0.19
PKP3-204ENST00000526971 FAM78BQ5VT40 261 aa13.84□□□□□ -0.19
PKP3-204ENST00000526971 ZNF709Q8N972 641 aa13.84□□□□□ -0.19
PKP3-204ENST00000526971 ASB13Q8WXK3 278 aa13.84□□□□□ -0.19
PKP3-204ENST00000526971 KCNIP2Q9NS61 270 aa13.84□□□□□ -0.19
PKP3-204ENST00000526971 XCL2Q9UBD3 114 aa13.84□□□□□ -0.19
PKP3-204ENST00000526971 PCLOQ9Y6V0 5065 aa13.84□□□□□ -0.19
PKP3-204ENST00000526971 IGLC2P0DOY2 106 aa13.83□□□□□ -0.2
PKP3-204ENST00000526971 PSG9Q00887 426 aa13.83□□□□□ -0.2
PKP3-204ENST00000526971 GCSAMLQ5JQS6 135 aa13.83□□□□□ -0.2
PKP3-204ENST00000526971 LCN15Q6UWW0 184 aa13.83□□□□□ -0.2
PKP3-204ENST00000526971 SMIM3Q9BZL3 60 aa13.83□□□□□ -0.2
PKP3-204ENST00000526971 HRH4Q9H3N8 390 aa13.83□□□□□ -0.2
PKP3-204ENST00000526971 KIAA1109Q2LD37 5005 aa13.82□□□□□ -0.2
PKP3-204ENST00000526971 ZNF705EA8MWA4 302 aaPredicted RBP13.82□□□□□ -0.2
PKP3-204ENST00000526971 C17orf112F2Z3M2 114 aa13.82□□□□□ -0.2
PKP3-204ENST00000526971 H3BQ15 152 aa13.82□□□□□ -0.2
PKP3-204ENST00000526971 IFNA5P01569 189 aa13.82□□□□□ -0.2
PKP3-204ENST00000526971 SNRPCP09234 159 aaKnown RBP13.82□□□□□ -0.2
PKP3-204ENST00000526971 GIPP09681 153 aaPredicted RBP13.82□□□□□ -0.2
PKP3-204ENST00000526971 HLA-DMBP28068 263 aa13.82□□□□□ -0.2
PKP3-204ENST00000526971 PSG3Q16557 428 aa13.82□□□□□ -0.2
PKP3-204ENST00000526971 ZNF738Q8NE65 137 aa13.82□□□□□ -0.2
PKP3-204ENST00000526971 SLC50A1Q9BRV3 221 aa13.82□□□□□ -0.2
PKP3-204ENST00000526971 C11orf68Q9H3H3 251 aaKnown RBP13.82□□□□□ -0.2
PKP3-204ENST00000526971 ZNF331Q9NQX6 463 aaPredicted RBP13.82□□□□□ -0.2
PKP3-204ENST00000526971 A8MTW9 85 aa13.81□□□□□ -0.2
PKP3-204ENST00000526971 DUSP14O95147 198 aaKnown RBP13.81□□□□□ -0.2
PKP3-204ENST00000526971 FXYD7P58549 80 aa13.81□□□□□ -0.2
PKP3-204ENST00000526971 SCGB1C1Q8TD33 95 aa13.81□□□□□ -0.2
PKP3-204ENST00000526971 SLC35B3Q9H1N7 401 aa13.81□□□□□ -0.2
PKP3-204ENST00000526971 WFDC1Q9HC57 220 aa13.81□□□□□ -0.2
PKP3-204ENST00000526971 X6R8D5 127 aa13.81□□□□□ -0.2
PKP3-204ENST00000526971 H3BTX0 84 aa13.8□□□□□ -0.2
PKP3-204ENST00000526971 CNN1P51911 297 aaKnown RBP13.8□□□□□ -0.2
PKP3-204ENST00000526971 GUK1Q16774 197 aa13.8□□□□□ -0.2
PKP3-204ENST00000526971 Q5BKY6 102 aa13.8□□□□□ -0.2
PKP3-204ENST00000526971 Q8NAQ8 132 aa13.8□□□□□ -0.2
PKP3-204ENST00000526971 SAT2Q96F10 170 aaPredicted RBP13.8□□□□□ -0.2
PKP3-204ENST00000526971 PARD6GQ9BYG4 376 aaPredicted RBP13.8□□□□□ -0.2
PKP3-204ENST00000526971 TMEM14CQ9P0S9 112 aa13.8□□□□□ -0.2
PKP3-204ENST00000526971 KLK5Q9Y337 293 aaPredicted RBP13.8□□□□□ -0.2
PKP3-204ENST00000526971 SLC17A3O00476 420 aa13.79□□□□□ -0.2
PKP3-204ENST00000526971 ZNF705DP0CH99 300 aaPredicted RBP13.79□□□□□ -0.2
PKP3-204ENST00000526971 ZNF705BP0CI00 300 aaPredicted RBP13.79□□□□□ -0.2
PKP3-204ENST00000526971 MIFP14174 115 aa13.79□□□□□ -0.2
PKP3-204ENST00000526971 AMTNQ6UX39 209 aa13.79□□□□□ -0.2
PKP3-204ENST00000526971 PHLDA1Q8WV24 401 aaPredicted RBP13.79□□□□□ -0.2
PKP3-204ENST00000526971 ZNF586Q9NXT0 402 aa13.79□□□□□ -0.2
PKP3-204ENST00000526971 IGHV4-28A0A0C4DH34 117 aa13.78□□□□□ -0.2
PKP3-204ENST00000526971 DEFB4AO15263 64 aa13.78□□□□□ -0.2
PKP3-204ENST00000526971 MIR17HGQ75NE6 70 aa13.78□□□□□ -0.2
PKP3-204ENST00000526971 OR8A1Q8NGG7 326 aa13.78□□□□□ -0.2
PKP3-204ENST00000526971 RPUSD4Q96CM3 377 aaKnown RBP13.78□□□□□ -0.2
PKP3-204ENST00000526971 AQP10Q96PS8 301 aa13.78□□□□□ -0.2
PKP3-204ENST00000526971 MFFQ9GZY8 342 aa13.78□□□□□ -0.2
PKP3-204ENST00000526971 RBMY1A1P0DJD3 496 aaKnown RBP13.77□□□□□ -0.21
PKP3-204ENST00000526971 RBMY1CP0DJD4 496 aa13.77□□□□□ -0.21
PKP3-204ENST00000526971 HIST1H1EP10412 219 aaKnown RBP13.77□□□□□ -0.21
PKP3-204ENST00000526971 HIST1H1AQ02539 215 aaPredicted RBP13.77□□□□□ -0.21
PKP3-204ENST00000526971 RBMY1FQ15415 496 aaKnown RBP13.77□□□□□ -0.21
PKP3-204ENST00000526971 LGALS9CQ6DKI2 356 aa13.77□□□□□ -0.21
PKP3-204ENST00000526971 ZNF705AQ6ZN79 300 aaPredicted RBP13.77□□□□□ -0.21
PKP3-204ENST00000526971 FAM167A-AS1Q96KT0 104 aa13.77□□□□□ -0.21
PKP3-204ENST00000526971 SLC25A2Q9BXI2 301 aa13.77□□□□□ -0.21
PKP3-204ENST00000526971 MRPL32Q9BYC8 188 aaKnown RBP13.77□□□□□ -0.21
PKP3-204ENST00000526971 TRBV19A0A075B6N1 114 aa13.76□□□□□ -0.21
PKP3-204ENST00000526971 ZNF253O75346 499 aa13.76□□□□□ -0.21
PKP3-204ENST00000526971 FFAR4Q5NUL3 377 aa13.76□□□□□ -0.21
PKP3-204ENST00000526971 FUT9Q9Y231 359 aa13.76□□□□□ -0.21
PKP3-204ENST00000526971 AGRNO00468 2067 aa13.76□□□□□ -0.21
PKP3-204ENST00000526971 ZNF705FA8MVS1 300 aaPredicted RBP13.75□□□□□ -0.21
PKP3-204ENST00000526971 AMBPP02760 352 aa13.75□□□□□ -0.21
PKP3-204ENST00000526971 PYYP10082 97 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms