RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 EIF3GO75821 320 aaKnown RBP eCLIP12.33□□□□□ -0.44
CAPN1-205ENST00000526954 FHITP49789 147 aa12.33□□□□□ -0.44
CAPN1-205ENST00000526954 LCN15Q6UWW0 184 aa12.33□□□□□ -0.44
CAPN1-205ENST00000526954 GTSCR1Q86UQ5 136 aa12.33□□□□□ -0.44
CAPN1-205ENST00000526954 SAT2Q96F10 170 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-205ENST00000526954 NOTCH1P46531 2555 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 TRBV19A0A075B6N1 114 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 HMGB3O15347 200 aaKnown RBP12.32□□□□□ -0.44
CAPN1-205ENST00000526954 CXorf1O96002 111 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 CD7P09564 240 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 ARL14EPLP0DKL9 152 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 ID1P41134 155 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 PSMB3P49720 205 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 CD81P60033 236 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 PDE6HQ13956 83 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 Q8N1Y9 231 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 FAM24BQ8N5W8 94 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 MBD3L1Q8WWY6 194 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 PRR25Q96S07 402 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 SLC50A1Q9BRV3 221 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 C19orf73Q9NVV2 129 aa12.32□□□□□ -0.44
CAPN1-205ENST00000526954 DNAH3Q8TD57 4116 aa12.31□□□□□ -0.44
CAPN1-205ENST00000526954 TRAV8-2A0A0B4J237 113 aa12.31□□□□□ -0.44
CAPN1-205ENST00000526954 SNRPD3P62318 126 aaKnown RBP12.31□□□□□ -0.44
CAPN1-205ENST00000526954 UBE2L3P68036 154 aaKnown RBP12.31□□□□□ -0.44
CAPN1-205ENST00000526954 ODF3L2Q3SX64 289 aa12.31□□□□□ -0.44
CAPN1-205ENST00000526954 ALKAL2Q6UX46 152 aa12.31□□□□□ -0.44
CAPN1-205ENST00000526954 FAM213BQ8TBF2 198 aa12.31□□□□□ -0.44
CAPN1-205ENST00000526954 SUN5Q8TC36 379 aa12.31□□□□□ -0.44
CAPN1-205ENST00000526954 C16orf92Q96LL3 132 aa12.31□□□□□ -0.44
CAPN1-205ENST00000526954 ZNF331Q9NQX6 463 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-205ENST00000526954 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
CAPN1-205ENST00000526954 NDUFB4O95168 129 aa12.3□□□□□ -0.44
CAPN1-205ENST00000526954 SNRPCP09234 159 aaKnown RBP12.3□□□□□ -0.44
CAPN1-205ENST00000526954 OR10J4P0C629 311 aa12.3□□□□□ -0.44
CAPN1-205ENST00000526954 GCHFRP30047 84 aa12.3□□□□□ -0.44
CAPN1-205ENST00000526954 LRRC20Q8TCA0 184 aa12.3□□□□□ -0.44
CAPN1-205ENST00000526954 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
CAPN1-205ENST00000526954 MAP6D1Q9H9H5 199 aa12.3□□□□□ -0.44
CAPN1-205ENST00000526954 CLEC5AQ9NY25 188 aa12.3□□□□□ -0.44
CAPN1-205ENST00000526954 H3BTX0 84 aa12.29□□□□□ -0.44
CAPN1-205ENST00000526954 SLC17A3O00476 420 aa12.29□□□□□ -0.44
CAPN1-205ENST00000526954 ZNF688P0C7X2 276 aa12.29□□□□□ -0.44
CAPN1-205ENST00000526954 FAM74A1Q5RGS3 127 aa12.29□□□□□ -0.44
CAPN1-205ENST00000526954 TEX261Q6UWH6 196 aa12.29□□□□□ -0.44
CAPN1-205ENST00000526954 BLNKQ8WV28 456 aa12.29□□□□□ -0.44
CAPN1-205ENST00000526954 TMEM167BQ9NRX6 74 aa12.29□□□□□ -0.44
CAPN1-205ENST00000526954 AURKAIP1Q9NWT8 199 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-205ENST00000526954 TRAV1-1A0A0B4J248 108 aa12.28□□□□□ -0.44
CAPN1-205ENST00000526954 OR11H12B2RN74 326 aa12.28□□□□□ -0.44
CAPN1-205ENST00000526954 H2AFB1P0C5Y9 115 aa12.28□□□□□ -0.44
CAPN1-205ENST00000526954 DEFB131AP59861 70 aa12.28□□□□□ -0.44
CAPN1-205ENST00000526954 PSG9Q00887 426 aa12.28□□□□□ -0.44
CAPN1-205ENST00000526954 LYPD1Q8N2G4 141 aa12.28□□□□□ -0.44
CAPN1-205ENST00000526954 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
CAPN1-205ENST00000526954 C20orf173Q96LM9 149 aa12.28□□□□□ -0.44
CAPN1-205ENST00000526954 UBQLN2Q9UHD9 624 aa12.28□□□□□ -0.44
CAPN1-205ENST00000526954 FGF8P55075 233 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-205ENST00000526954 PSMG4Q5JS54 123 aa12.27□□□□□ -0.45
CAPN1-205ENST00000526954 IGFL4Q6B9Z1 124 aa12.27□□□□□ -0.45
CAPN1-205ENST00000526954 LINC00052Q96N35 136 aa12.27□□□□□ -0.45
CAPN1-205ENST00000526954 ZNF705EA8MWA4 302 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-205ENST00000526954 PSG3Q16557 428 aa12.26□□□□□ -0.45
CAPN1-205ENST00000526954 RNF182Q8N6D2 247 aa12.26□□□□□ -0.45
CAPN1-205ENST00000526954 ZNF680Q8NEM1 530 aa12.26□□□□□ -0.45
CAPN1-205ENST00000526954 MRPL53Q96EL3 112 aaKnown RBP12.26□□□□□ -0.45
CAPN1-205ENST00000526954 PRELID1Q9Y255 219 aa12.26□□□□□ -0.45
CAPN1-205ENST00000526954 A8MZ25 164 aa12.25□□□□□ -0.45
CAPN1-205ENST00000526954 IFNA7P01567 189 aa12.25□□□□□ -0.45
CAPN1-205ENST00000526954 HBE1P02100 147 aa12.25□□□□□ -0.45
CAPN1-205ENST00000526954 PRB2P02812 416 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-205ENST00000526954 RANP62826 216 aaKnown RBP12.25□□□□□ -0.45
CAPN1-205ENST00000526954 BLOC1S1P78537 153 aa12.25□□□□□ -0.45
CAPN1-205ENST00000526954 APRG1Q8IVJ8 170 aa12.25□□□□□ -0.45
CAPN1-205ENST00000526954 DEFB125Q8N687 156 aa12.25□□□□□ -0.45
CAPN1-205ENST00000526954 WFDC10AQ9H1F0 79 aa12.25□□□□□ -0.45
CAPN1-205ENST00000526954 TMPRSS5Q9H3S3 457 aa12.25□□□□□ -0.45
CAPN1-205ENST00000526954 AAMDCQ9H7C9 122 aa12.25□□□□□ -0.45
CAPN1-205ENST00000526954 A0A1W2PRE2 83 aa12.24□□□□□ -0.45
CAPN1-205ENST00000526954 TEX46H3BTG2 121 aa12.24□□□□□ -0.45
CAPN1-205ENST00000526954 K7EIL1 84 aa12.24□□□□□ -0.45
CAPN1-205ENST00000526954 HLA-DMBP28068 263 aa12.24□□□□□ -0.45
CAPN1-205ENST00000526954 EXOC3-AS1Q8N2X6 119 aa12.24□□□□□ -0.45
CAPN1-205ENST00000526954 CITED4Q96RK1 184 aa12.24□□□□□ -0.45
CAPN1-205ENST00000526954 Q9H3A6 140 aa12.24□□□□□ -0.45
CAPN1-205ENST00000526954 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
CAPN1-205ENST00000526954 ICAM4Q14773 271 aa12.23□□□□□ -0.45
CAPN1-205ENST00000526954 ZNF124Q15973 351 aa12.23□□□□□ -0.45
CAPN1-205ENST00000526954 FOXI2Q6ZQN5 318 aa12.23□□□□□ -0.45
CAPN1-205ENST00000526954 IQCF2Q8IXL9 164 aa12.23□□□□□ -0.45
CAPN1-205ENST00000526954 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
CAPN1-205ENST00000526954 ARL2-SNX15V9GYD0 113 aa12.23□□□□□ -0.45
CAPN1-205ENST00000526954 AGRNO00468 2067 aa12.22□□□□□ -0.45
CAPN1-205ENST00000526954 IGHV4-30-4P0DP06 118 aa12.22□□□□□ -0.45
CAPN1-205ENST00000526954 PPT1P50897 306 aa12.22□□□□□ -0.45
CAPN1-205ENST00000526954 PMS2P11Q13670 270 aa12.22□□□□□ -0.45
CAPN1-205ENST00000526954 ARL6IP6Q8N6S5 226 aa12.22□□□□□ -0.45
CAPN1-205ENST00000526954 ZNF738Q8NE65 137 aa12.22□□□□□ -0.45
CAPN1-205ENST00000526954 RPUSD4Q96CM3 377 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms