RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SRD5A3Q9H8P0 318 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 TRAV2A0A0B4J234 112 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 TRAV8-2A0A0B4J237 113 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 H3BQ15 152 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 CD5P06127 495 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 TFPI2P48307 235 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 RAB2AP61019 212 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 ZNF266Q14584 549 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 ZNF124Q15973 351 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 FFAR4Q5NUL3 377 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 SIGLEC15Q6ZMC9 328 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 RBPMS2Q6ZRY4 209 aaKnown RBP8□□□□□ -1.13
NEDD8-204ENST00000526430 MIR17HGQ75NE6 70 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 PHLDA1Q8WV24 401 aaPredicted RBP8□□□□□ -1.13
NEDD8-204ENST00000526430 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
NEDD8-204ENST00000526430 GRAMD2BQ96HH9 432 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 ARPC5LQ9BPX5 153 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 PSMG3Q9BT73 122 aaPredicted RBP8□□□□□ -1.13
NEDD8-204ENST00000526430 SLC25A2Q9BXI2 301 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 TMEM231Q9H6L2 316 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 SLC25A22Q9H936 323 aa8□□□□□ -1.13
NEDD8-204ENST00000526430 HELTA6NFD8 242 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 C17orf112F2Z3M2 114 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 BCL2L11O43521 198 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 COX7A2P2O60397 106 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 IGLC2P0DOY2 106 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 SPP1P10451 314 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 NKX2-5P52952 324 aaPredicted RBP7.99□□□□□ -1.13
NEDD8-204ENST00000526430 TCTAP57738 103 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 FAM78BQ5VT40 261 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 SSX7Q7RTT5 188 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 OR8I2Q8N0Y5 310 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 DEFB125Q8N687 156 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 OR1L4Q8NGR5 311 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 C20orf173Q96LM9 149 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 RPRMQ9NS64 109 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 ZNF586Q9NXT0 402 aa7.99□□□□□ -1.13
NEDD8-204ENST00000526430 A0A087X0K7 114 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 OR11H12B2RN74 326 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 SNRPCP09234 159 aaKnown RBP7.98□□□□□ -1.13
NEDD8-204ENST00000526430 M6PRP20645 277 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 BMI1P35226 326 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 DEFB1P60022 68 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 SERF2P84101 59 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 ZNF726P1Q15940 193 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 IGFL4Q6B9Z1 124 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 ZNF709Q8N972 641 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 STXBP6Q8NFX7 210 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 PPP1R14BQ96C90 147 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 PFDN5Q99471 154 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 MAP6D1Q9H9H5 199 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 NRN1Q9NPD7 142 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 UBQLN2Q9UHD9 624 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 FUT9Q9Y231 359 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 TP53TG1Q9Y2A0 90 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 AGRNO00468 2067 aa7.98□□□□□ -1.13
NEDD8-204ENST00000526430 BORCS7-ASMTA0A0B4J1R7 106 aa7.97□□□□□ -1.13
NEDD8-204ENST00000526430 PRSS29PA6NIE9 313 aa7.97□□□□□ -1.13
NEDD8-204ENST00000526430 NDUFB4O95168 129 aa7.97□□□□□ -1.13
NEDD8-204ENST00000526430 PYYP10082 97 aa7.97□□□□□ -1.13
NEDD8-204ENST00000526430 RPL11P62913 178 aaKnown RBP7.97□□□□□ -1.13
NEDD8-204ENST00000526430 APRG1Q8IVJ8 170 aa7.97□□□□□ -1.13
NEDD8-204ENST00000526430 STOML3Q8TAV4 291 aa7.97□□□□□ -1.13
NEDD8-204ENST00000526430 NARS2Q96I59 477 aaKnown RBP7.97□□□□□ -1.13
NEDD8-204ENST00000526430 GPR82Q96P67 336 aa7.97□□□□□ -1.13
NEDD8-204ENST00000526430 TMEM14CQ9P0S9 112 aa7.97□□□□□ -1.13
NEDD8-204ENST00000526430 OR4C46A6NHA9 309 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 H3BTX0 84 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 SLC17A3O00476 420 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 CDK2AP2O75956 126 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 SEC11BP0C7V7 166 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 RPL7P18124 248 aaKnown RBP7.96□□□□□ -1.14
NEDD8-204ENST00000526430 HLA-DMBP28068 263 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 DEFB131AP59861 70 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 ZFP69Q49AA0 526 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 OR10G4Q8NGN3 311 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 OR10G9Q8NGN4 311 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 OR10G7Q8NGN6 311 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 FXYD5Q96DB9 178 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 GNPNAT1Q96EK6 184 aaPredicted RBP7.96□□□□□ -1.14
NEDD8-204ENST00000526430 HRH4Q9H3N8 390 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 KCNIP2Q9NS61 270 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 PFDN2Q9UHV9 154 aa7.96□□□□□ -1.14
NEDD8-204ENST00000526430 KANTRA0A1W2PQU2 76 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 DNASE2O00115 360 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-204ENST00000526430 ZNF688P0C7X2 276 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 GALR1P47211 349 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 FHITP49789 147 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 PAFAH1B2P68402 229 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 ACOT6Q3I5F7 207 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-204ENST00000526430 GDF5OSQ5U4N7 250 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 BPIFA4PQ86YQ2 179 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 BAP18Q8IXM2 172 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 SUN5Q8TC36 379 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 RAB24Q969Q5 203 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 RNF183Q96D59 192 aa7.95□□□□□ -1.14
NEDD8-204ENST00000526430 ZNF471Q9BX82 626 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-204ENST00000526430 MRPL32Q9BYC8 188 aaKnown RBP7.95□□□□□ -1.14
NEDD8-204ENST00000526430 ZNF331Q9NQX6 463 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-204ENST00000526430 TRBV19A0A075B6N1 114 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms