RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 PFDN5Q99471 154 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 B9D2Q9BPU9 175 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 MAP6D1Q9H9H5 199 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 KCNIP2Q9NS61 270 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 RNF24Q9Y225 148 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 UMAD1C9J7I0 102 aa9.6□□□□□ -0.87
SMPD1-202ENST00000526280 RPL7P18124 248 aaKnown RBP9.6□□□□□ -0.87
SMPD1-202ENST00000526280 ATRAIDQ6UW56 229 aa9.6□□□□□ -0.87
SMPD1-202ENST00000526280 LINC00322Q6ZN03 302 aaPredicted RBP9.6□□□□□ -0.87
SMPD1-202ENST00000526280 FAM213BQ8TBF2 198 aa9.6□□□□□ -0.87
SMPD1-202ENST00000526280 GATAD1Q8WUU5 269 aa9.6□□□□□ -0.87
SMPD1-202ENST00000526280 C17orf77Q96MU5 243 aa9.6□□□□□ -0.87
SMPD1-202ENST00000526280 RSG1Q9BU20 258 aa9.6□□□□□ -0.87
SMPD1-202ENST00000526280 SRD5A3Q9H8P0 318 aa9.6□□□□□ -0.87
SMPD1-202ENST00000526280 SEPSECSQ9HD40 501 aaKnown RBP9.6□□□□□ -0.87
SMPD1-202ENST00000526280 CARHSP1Q9Y2V2 147 aaKnown RBP9.6□□□□□ -0.87
SMPD1-202ENST00000526280 RFNGQ9Y644 331 aa9.6□□□□□ -0.87
SMPD1-202ENST00000526280 DNAH9Q9NYC9 4486 aa9.6□□□□□ -0.87
SMPD1-202ENST00000526280 RBMY1BA6NDE4 496 aaKnown RBP9.59□□□□□ -0.87
SMPD1-202ENST00000526280 RBMY1EA6NEQ0 496 aaKnown RBP9.59□□□□□ -0.87
SMPD1-202ENST00000526280 F8W036 122 aa9.59□□□□□ -0.87
SMPD1-202ENST00000526280 RBMY1DP0C7P1 496 aaKnown RBP9.59□□□□□ -0.87
SMPD1-202ENST00000526280 GCSAMLQ5JQS6 135 aa9.59□□□□□ -0.87
SMPD1-202ENST00000526280 MORN5Q5VZ52 161 aa9.59□□□□□ -0.87
SMPD1-202ENST00000526280 APRG1Q8IVJ8 170 aa9.59□□□□□ -0.87
SMPD1-202ENST00000526280 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.59□□□□□ -0.87
SMPD1-202ENST00000526280 SEC11CQ9BY50 192 aa9.59□□□□□ -0.87
SMPD1-202ENST00000526280 SOCS3O14543 225 aa9.58□□□□□ -0.88
SMPD1-202ENST00000526280 MRPS12O15235 138 aaKnown RBP9.58□□□□□ -0.88
SMPD1-202ENST00000526280 ZNF688P0C7X2 276 aa9.58□□□□□ -0.88
SMPD1-202ENST00000526280 ADCYAP1P18509 176 aa9.58□□□□□ -0.88
SMPD1-202ENST00000526280 FHITP49789 147 aa9.58□□□□□ -0.88
SMPD1-202ENST00000526280 DEFB131AP59861 70 aa9.58□□□□□ -0.88
SMPD1-202ENST00000526280 PEA15Q15121 130 aa9.58□□□□□ -0.88
SMPD1-202ENST00000526280 DPPA3Q6W0C5 159 aa9.58□□□□□ -0.88
SMPD1-202ENST00000526280 SBSPONQ8IVN8 264 aa9.58□□□□□ -0.88
SMPD1-202ENST00000526280 NKX6-2Q9C056 277 aaPredicted RBP9.58□□□□□ -0.88
SMPD1-202ENST00000526280 TIMM9Q9Y5J7 89 aa9.58□□□□□ -0.88
SMPD1-202ENST00000526280 TRAV5A0A0B4J249 113 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 MEOX2P50222 304 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 SNRPD3P62318 126 aaKnown RBP9.57□□□□□ -0.88
SMPD1-202ENST00000526280 ZNF124Q15973 351 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 GUK1Q16774 197 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 FFAR4Q5NUL3 377 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 AKR1C8PQ5T2L2 129 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 SAMD13Q5VXD3 122 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 BPIFA4PQ86YQ2 179 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 SVBPQ8N300 66 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 ASCL2Q99929 193 aa9.57□□□□□ -0.88
SMPD1-202ENST00000526280 A0A087X0K7 114 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 C9JQL5 133 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 ISLRO14498 428 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 SFTA3P0C7M3 94 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 ATF4P18848 351 aaPredicted RBP9.56□□□□□ -0.88
SMPD1-202ENST00000526280 ID1P41134 155 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 PSMB3P49720 205 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 PSMG4Q5JS54 123 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 FAM78BQ5VT40 261 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 LOC102724200A0A096LPH7 203 aaPredicted RBP9.56□□□□□ -0.88
SMPD1-202ENST00000526280 H2AFB1P0C5Y9 115 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 NHLRC4P0CG21 123 aaPredicted RBP9.56□□□□□ -0.88
SMPD1-202ENST00000526280 HAGHQ16775 308 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 C16orf92Q96LL3 132 aa9.56□□□□□ -0.88
SMPD1-202ENST00000526280 PSMG3Q9BT73 122 aaPredicted RBP9.56□□□□□ -0.88
SMPD1-202ENST00000526280 EIF5A2Q9GZV4 153 aaKnown RBP9.56□□□□□ -0.88
SMPD1-202ENST00000526280 SNAPINO95295 136 aa9.55□□□□□ -0.88
SMPD1-202ENST00000526280 IGLC2P0DOY2 106 aa9.55□□□□□ -0.88
SMPD1-202ENST00000526280 RAB2AP61019 212 aa9.55□□□□□ -0.88
SMPD1-202ENST00000526280 CCL20P78556 96 aa9.55□□□□□ -0.88
SMPD1-202ENST00000526280 SPATA31B1PQ5VZV4 182 aa9.55□□□□□ -0.88
SMPD1-202ENST00000526280 MIR17HGQ75NE6 70 aa9.55□□□□□ -0.88
SMPD1-202ENST00000526280 FAM167A-AS1Q96KT0 104 aa9.55□□□□□ -0.88
SMPD1-202ENST00000526280 MRPL32Q9BYC8 188 aaKnown RBP9.55□□□□□ -0.88
SMPD1-202ENST00000526280 TMEM14CQ9P0S9 112 aa9.55□□□□□ -0.88
SMPD1-202ENST00000526280 FUT9Q9Y231 359 aa9.55□□□□□ -0.88
SMPD1-202ENST00000526280 AGRNO00468 2067 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 COL7A1Q02388 2944 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 TRAV8-2A0A0B4J237 113 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 TRAV1-1A0A0B4J248 108 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 A0A1B0GV50 99 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 FAM74A7A6NL05 159 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 KNCNA6PVL3 124 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 H3BQ15 152 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 HBE1P02100 147 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 PPT1P50897 306 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 SERF2P84101 59 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 ACOT6Q3I5F7 207 aaPredicted RBP9.54□□□□□ -0.88
SMPD1-202ENST00000526280 FAM74A3Q4VXF1 159 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 SLC25A2Q9BXI2 301 aa9.54□□□□□ -0.88
SMPD1-202ENST00000526280 HUWE1Q7Z6Z7 4374 aaKnown RBP9.53□□□□□ -0.88
SMPD1-202ENST00000526280 KIR2DL5BA0A0G2JN68 375 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 KIR2DL5BA0A0G2JPC4 375 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 RBFOX3A6NFN3 312 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 SNRPCP09234 159 aaKnown RBP9.53□□□□□ -0.88
SMPD1-202ENST00000526280 RPL35AP18077 110 aaKnown RBP9.53□□□□□ -0.88
SMPD1-202ENST00000526280 RHOBP62745 196 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 ACTL10Q5JWF8 245 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 IGFL4Q6B9Z1 124 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms