RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 RPL7P18124 248 aaKnown RBP11.53□□□□□ -0.56
PVT1-220ENST00000524165 HNRNPA3P51991 378 aaKnown RBP11.53□□□□□ -0.56
PVT1-220ENST00000524165 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
PVT1-220ENST00000524165 ZFAND1Q8TCF1 268 aa11.53□□□□□ -0.56
PVT1-220ENST00000524165 DTD1Q8TEA8 209 aa11.53□□□□□ -0.56
PVT1-220ENST00000524165 GLYATL2Q8WU03 294 aa11.53□□□□□ -0.56
PVT1-220ENST00000524165 C8orf49Q96NF6 230 aa11.53□□□□□ -0.56
PVT1-220ENST00000524165 PARD6GQ9BYG4 376 aaPredicted RBP11.53□□□□□ -0.56
PVT1-220ENST00000524165 K7EQD1 137 aa11.52□□□□□ -0.57
PVT1-220ENST00000524165 RPL37AP61513 92 aaKnown RBP11.52□□□□□ -0.57
PVT1-220ENST00000524165 FHL2Q14192 279 aa11.52□□□□□ -0.57
PVT1-220ENST00000524165 MEF2DQ14814 521 aa11.52□□□□□ -0.57
PVT1-220ENST00000524165 CCDC190Q86UF4 302 aa11.52□□□□□ -0.57
PVT1-220ENST00000524165 SELENOHQ8IZQ5 122 aaKnown RBP11.52□□□□□ -0.57
PVT1-220ENST00000524165 BPIFCQ8NFQ6 507 aa11.52□□□□□ -0.57
PVT1-220ENST00000524165 LRRC20Q8TCA0 184 aa11.52□□□□□ -0.57
PVT1-220ENST00000524165 DAZAP1Q96EP5 407 aaKnown RBP11.52□□□□□ -0.57
PVT1-220ENST00000524165 VGLL1Q99990 258 aa11.52□□□□□ -0.57
PVT1-220ENST00000524165 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
PVT1-220ENST00000524165 BLOC1S6Q9UL45 172 aa11.52□□□□□ -0.57
PVT1-220ENST00000524165 TRAV12-3A0A0B4J271 114 aa11.51□□□□□ -0.57
PVT1-220ENST00000524165 IGHV3-38A0A0C4DH36 116 aa11.51□□□□□ -0.57
PVT1-220ENST00000524165 H3BRN7 92 aa11.51□□□□□ -0.57
PVT1-220ENST00000524165 IGHV3-53P01767 116 aa11.51□□□□□ -0.57
PVT1-220ENST00000524165 PRB4P10163 310 aaPredicted RBP11.51□□□□□ -0.57
PVT1-220ENST00000524165 WFDC2Q14508 124 aa11.51□□□□□ -0.57
PVT1-220ENST00000524165 LINC01556Q5JQF7 62 aa11.51□□□□□ -0.57
PVT1-220ENST00000524165 Q9HAA7 133 aa11.51□□□□□ -0.57
PVT1-220ENST00000524165 DNAJC4Q9NNZ3 241 aa11.51□□□□□ -0.57
PVT1-220ENST00000524165 HSPB7Q9UBY9 170 aa11.51□□□□□ -0.57
PVT1-220ENST00000524165 TEX13DA0A0J9YY54 714 aaPredicted RBP11.5□□□□□ -0.57
PVT1-220ENST00000524165 SULT1A3P0DMM9 295 aa11.5□□□□□ -0.57
PVT1-220ENST00000524165 SULT1A4P0DMN0 295 aa11.5□□□□□ -0.57
PVT1-220ENST00000524165 SAMD12Q8N8I0 201 aa11.5□□□□□ -0.57
PVT1-220ENST00000524165 SHANK2-AS3Q9BTD1 123 aa11.5□□□□□ -0.57
PVT1-220ENST00000524165 IGLV2-11P01706 119 aa11.49□□□□□ -0.57
PVT1-220ENST00000524165 GYPEP15421 78 aa11.49□□□□□ -0.57
PVT1-220ENST00000524165 TCL1AP56279 114 aa11.49□□□□□ -0.57
PVT1-220ENST00000524165 LINC01620Q4KN68 170 aa11.49□□□□□ -0.57
PVT1-220ENST00000524165 MORN5Q5VZ52 161 aa11.49□□□□□ -0.57
PVT1-220ENST00000524165 OR1S1Q8NH92 325 aa11.49□□□□□ -0.57
PVT1-220ENST00000524165 ZNF431Q8TF32 576 aaPredicted RBP11.49□□□□□ -0.57
PVT1-220ENST00000524165 PCNPQ8WW12 178 aaKnown RBP11.49□□□□□ -0.57
PVT1-220ENST00000524165 TM2D2Q9BX73 214 aa11.49□□□□□ -0.57
PVT1-220ENST00000524165 RBKSQ9H477 322 aa11.49□□□□□ -0.57
PVT1-220ENST00000524165 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.48□□□□□ -0.57
PVT1-220ENST00000524165 KRTAP9-6A0A140TA67 174 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 E5RGE8 158 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 J3KRW8 73 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 GATA2P23769 480 aaPredicted RBP11.48□□□□□ -0.57
PVT1-220ENST00000524165 LEPP41159 167 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 AQP4P55087 323 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 ANXA2RQ3ZCQ2 193 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 RNASE10Q5GAN6 216 aaKnown RBP11.48□□□□□ -0.57
PVT1-220ENST00000524165 TMEM268Q5VZI3 342 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 TMEM182Q6ZP80 229 aaPredicted RBP11.48□□□□□ -0.57
PVT1-220ENST00000524165 CROCCP3Q8IVE0 287 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 OR13C8Q8NGS7 320 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 ODF3Q96PU9 254 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 KLF12Q9Y4X4 402 aa11.48□□□□□ -0.57
PVT1-220ENST00000524165 ORM1P02763 201 aa11.47□□□□□ -0.57
PVT1-220ENST00000524165 CXCL2P19875 107 aa11.47□□□□□ -0.57
PVT1-220ENST00000524165 Q6ZRU5 148 aa11.47□□□□□ -0.57
PVT1-220ENST00000524165 TXNDC17Q9BRA2 123 aa11.47□□□□□ -0.57
PVT1-220ENST00000524165 BOLA1Q9Y3E2 137 aa11.47□□□□□ -0.57
PVT1-220ENST00000524165 LOC100506127A0A0U1RQW1 187 aa11.46□□□□□ -0.57
PVT1-220ENST00000524165 GAS8-AS1O95177 125 aa11.46□□□□□ -0.57
PVT1-220ENST00000524165 RAP2BP61225 183 aa11.46□□□□□ -0.57
PVT1-220ENST00000524165 RAB11AP62491 216 aa11.46□□□□□ -0.57
PVT1-220ENST00000524165 IBA57Q5T440 356 aaKnown RBP11.46□□□□□ -0.57
PVT1-220ENST00000524165 TEPPQ6URK8 271 aa11.46□□□□□ -0.57
PVT1-220ENST00000524165 IQCF2Q8IXL9 164 aa11.46□□□□□ -0.57
PVT1-220ENST00000524165 EIF4E3Q8N5X7 224 aaKnown RBP11.46□□□□□ -0.57
PVT1-220ENST00000524165 TERB2Q8NHR7 220 aa11.46□□□□□ -0.57
PVT1-220ENST00000524165 ZNF331Q9NQX6 463 aaPredicted RBP11.46□□□□□ -0.57
PVT1-220ENST00000524165 TRGV4A0A0C4DH28 118 aa11.45□□□□□ -0.58
PVT1-220ENST00000524165 TNFAIP8O95379 198 aa11.45□□□□□ -0.58
PVT1-220ENST00000524165 TNFSF8P32971 234 aa11.45□□□□□ -0.58
PVT1-220ENST00000524165 TIRAPP58753 221 aa11.45□□□□□ -0.58
PVT1-220ENST00000524165 LAGE3Q14657 143 aa11.45□□□□□ -0.58
PVT1-220ENST00000524165 ZBTB8BQ8NAP8 495 aaPredicted RBP11.45□□□□□ -0.58
PVT1-220ENST00000524165 TMEM37Q8WXS4 190 aa11.45□□□□□ -0.58
PVT1-220ENST00000524165 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
PVT1-220ENST00000524165 NAA60Q9H7X0 242 aa11.45□□□□□ -0.58
PVT1-220ENST00000524165 HIGD1AQ9Y241 93 aa11.45□□□□□ -0.58
PVT1-220ENST00000524165 LINC00854A0A1B0GVQ3 168 aa11.44□□□□□ -0.58
PVT1-220ENST00000524165 CT45A10P0DMU9 189 aa11.44□□□□□ -0.58
PVT1-220ENST00000524165 CCR6P51684 374 aa11.44□□□□□ -0.58
PVT1-220ENST00000524165 LCN15Q6UWW0 184 aa11.44□□□□□ -0.58
PVT1-220ENST00000524165 ACOT7LQ6ZUV0 252 aa11.44□□□□□ -0.58
PVT1-220ENST00000524165 SNX29P2Q8IUI4 249 aa11.44□□□□□ -0.58
PVT1-220ENST00000524165 MARCH1Q8TCQ1 289 aa11.44□□□□□ -0.58
PVT1-220ENST00000524165 BLNKQ8WV28 456 aa11.44□□□□□ -0.58
PVT1-220ENST00000524165 MRPL16Q9NX20 251 aaKnown RBP11.44□□□□□ -0.58
PVT1-220ENST00000524165 SMIM31A0A1B0GVY4 71 aa11.43□□□□□ -0.58
PVT1-220ENST00000524165 CRYM-AS1A6NIL9 109 aa11.43□□□□□ -0.58
PVT1-220ENST00000524165 PRAC2D3DTV9 90 aa11.43□□□□□ -0.58
PVT1-220ENST00000524165 LECT2O14960 151 aa11.43□□□□□ -0.58
PVT1-220ENST00000524165 CD3DP04234 171 aa11.43□□□□□ -0.58
PVT1-220ENST00000524165 SLC25A5P05141 298 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms