RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 PRR20CP86479 221 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 PRR20DP86480 221 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 PRR20BP86481 221 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 PRR20AP86496 221 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 LGALS9CQ6DKI2 356 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 LRRC20Q8TCA0 184 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 PFDN5Q99471 154 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 SLC25A31Q9H0C2 315 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 TEX48A0A1B0GUV7 120 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 IGLL5B9A064 214 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 E5RGE8 158 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 F6UB75 175 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 MRPS12O15235 138 aaKnown RBP12.43□□□□□ -0.42
CCNC-213ENST00000523541 HLA-DMBP28068 263 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 FGL1Q08830 312 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 C10orf113Q5VZT2 155 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 LCN15Q6UWW0 184 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 TMEM37Q8WXS4 190 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 SLC50A1Q9BRV3 221 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 RFNGQ9Y644 331 aa12.43□□□□□ -0.42
CCNC-213ENST00000523541 TRAV10A0A0B4J240 114 aa12.42□□□□□ -0.42
CCNC-213ENST00000523541 CXCL3P19876 107 aa12.42□□□□□ -0.42
CCNC-213ENST00000523541 PSG3Q16557 428 aa12.42□□□□□ -0.42
CCNC-213ENST00000523541 GUK1Q16774 197 aa12.42□□□□□ -0.42
CCNC-213ENST00000523541 AMTNQ6UX39 209 aa12.42□□□□□ -0.42
CCNC-213ENST00000523541 IGF2BP2-AS1Q96M15 143 aa12.42□□□□□ -0.42
CCNC-213ENST00000523541 SLC35B3Q9H1N7 401 aa12.42□□□□□ -0.42
CCNC-213ENST00000523541 IGSF23A1L1A6 192 aa12.41□□□□□ -0.42
CCNC-213ENST00000523541 SPART-AS1P0CW21 52 aa12.41□□□□□ -0.42
CCNC-213ENST00000523541 CNN1P51911 297 aaKnown RBP12.41□□□□□ -0.42
CCNC-213ENST00000523541 ZNF738Q8NE65 137 aa12.41□□□□□ -0.42
CCNC-213ENST00000523541 HBE1P02100 147 aa12.4□□□□□ -0.42
CCNC-213ENST00000523541 EMP1P54849 157 aa12.4□□□□□ -0.42
CCNC-213ENST00000523541 BAXQ07812 192 aa12.4□□□□□ -0.42
CCNC-213ENST00000523541 OPCMLQ14982 345 aa12.4□□□□□ -0.42
CCNC-213ENST00000523541 Q6ZTC4 211 aa12.4□□□□□ -0.42
CCNC-213ENST00000523541 OR11H7Q8NGC8 314 aa12.4□□□□□ -0.42
CCNC-213ENST00000523541 OR8A1Q8NGG7 326 aa12.4□□□□□ -0.42
CCNC-213ENST00000523541 ZNF331Q9NQX6 463 aaPredicted RBP12.4□□□□□ -0.42
CCNC-213ENST00000523541 SLC39A9Q9NUM3 307 aa12.4□□□□□ -0.42
CCNC-213ENST00000523541 PXMP4Q9Y6I8 212 aa12.4□□□□□ -0.42
CCNC-213ENST00000523541 EPPK1P58107 5090 aaKnown RBP12.39□□□□□ -0.43
CCNC-213ENST00000523541 MIC13Q5XKP0 118 aa12.39□□□□□ -0.43
CCNC-213ENST00000523541 IGFL4Q6B9Z1 124 aa12.39□□□□□ -0.43
CCNC-213ENST00000523541 ZNF767PQ75MW2 155 aa12.39□□□□□ -0.43
CCNC-213ENST00000523541 C1orf158Q8N1D5 194 aa12.39□□□□□ -0.43
CCNC-213ENST00000523541 RNF182Q8N6D2 247 aa12.39□□□□□ -0.43
CCNC-213ENST00000523541 ZNF253O75346 499 aa12.38□□□□□ -0.43
CCNC-213ENST00000523541 PET100P0DJ07 73 aa12.38□□□□□ -0.43
CCNC-213ENST00000523541 IGLC2P0DOY2 106 aa12.38□□□□□ -0.43
CCNC-213ENST00000523541 OXA1LQ15070 435 aa12.38□□□□□ -0.43
CCNC-213ENST00000523541 RRN3P1Q2M238 152 aa12.38□□□□□ -0.43
CCNC-213ENST00000523541 C12orf74Q32Q52 190 aa12.38□□□□□ -0.43
CCNC-213ENST00000523541 RPP25LQ8N5L8 163 aaKnown RBP12.38□□□□□ -0.43
CCNC-213ENST00000523541 RPUSD4Q96CM3 377 aaKnown RBP12.38□□□□□ -0.43
CCNC-213ENST00000523541 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
CCNC-213ENST00000523541 RNF126Q9BV68 326 aa12.38□□□□□ -0.43
CCNC-213ENST00000523541 UBE2L5PA0A1B0GUS4 154 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 SIX6O95475 246 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 INSP01308 110 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 FGF7P21781 194 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 NHLH2Q02577 135 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 TMEM256Q8N2U0 113 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 OR5C1Q8NGR4 320 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 SAT2Q96F10 170 aaPredicted RBP12.37□□□□□ -0.43
CCNC-213ENST00000523541 KCNIP2Q9NS61 270 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 PPP1R14DQ9NXH3 145 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 APLNQ9ULZ1 77 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 CELA1Q9UNI1 258 aa12.37□□□□□ -0.43
CCNC-213ENST00000523541 BOLA2-SMG1P6H3BVE0 249 aa12.36□□□□□ -0.43
CCNC-213ENST00000523541 SSNA1O43805 119 aa12.36□□□□□ -0.43
CCNC-213ENST00000523541 H2BFSP57053 126 aa12.36□□□□□ -0.43
CCNC-213ENST00000523541 PPP1R1CQ8WVI7 109 aa12.36□□□□□ -0.43
CCNC-213ENST00000523541 FAM210BQ96KR6 192 aa12.36□□□□□ -0.43
CCNC-213ENST00000523541 NPCDR1Q9BY65 106 aa12.36□□□□□ -0.43
CCNC-213ENST00000523541 TMEM14CQ9P0S9 112 aa12.36□□□□□ -0.43
CCNC-213ENST00000523541 DKK2Q9UBU2 259 aa12.36□□□□□ -0.43
CCNC-213ENST00000523541 KMT2AQ03164 3969 aa12.36□□□□□ -0.43
CCNC-213ENST00000523541 VPS13DQ5THJ4 4388 aa12.35□□□□□ -0.43
CCNC-213ENST00000523541 DEFB131BA0A096LNP1 70 aa12.35□□□□□ -0.43
CCNC-213ENST00000523541 CRXO43186 299 aaPredicted RBP12.35□□□□□ -0.43
CCNC-213ENST00000523541 TSPOP30536 169 aa12.35□□□□□ -0.43
CCNC-213ENST00000523541 RHOBP62745 196 aa12.35□□□□□ -0.43
CCNC-213ENST00000523541 HIST1H1AQ02539 215 aaPredicted RBP12.35□□□□□ -0.43
CCNC-213ENST00000523541 C20orf144Q9BQM9 153 aa12.35□□□□□ -0.43
CCNC-213ENST00000523541 OR5AC2Q9NZP5 309 aa12.35□□□□□ -0.43
CCNC-213ENST00000523541 IGHV4-4A0A075B6R2 117 aa12.34□□□□□ -0.43
CCNC-213ENST00000523541 LOC102723971A0A1B0GUV8 181 aa12.34□□□□□ -0.43
CCNC-213ENST00000523541 H0YIZ8 118 aa12.34□□□□□ -0.43
CCNC-213ENST00000523541 PDE6HQ13956 83 aa12.34□□□□□ -0.43
CCNC-213ENST00000523541 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
CCNC-213ENST00000523541 LRRC37A5PQ49AS3 106 aa12.34□□□□□ -0.43
CCNC-213ENST00000523541 MORN5Q5VZ52 161 aa12.34□□□□□ -0.43
CCNC-213ENST00000523541 OR10J6PQ8NGY7 276 aa12.34□□□□□ -0.43
CCNC-213ENST00000523541 MRPL53Q96EL3 112 aaKnown RBP12.34□□□□□ -0.43
CCNC-213ENST00000523541 NIPSNAP3BQ9BS92 247 aa12.34□□□□□ -0.43
CCNC-213ENST00000523541 C17orf112F2Z3M2 114 aa12.33□□□□□ -0.44
CCNC-213ENST00000523541 H3BQ15 152 aa12.33□□□□□ -0.44
CCNC-213ENST00000523541 M0R2Z0 102 aa12.33□□□□□ -0.44
CCNC-213ENST00000523541 MPC2O95563 127 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms